FFCP PHASE1:Hg19::chr9:123165695..123165711,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55755|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18672|TSSclassifier=S|UniProt=|association_with_transcript=18bp_to_ENST00000433194_5end|coexpression_cluster_id=C125|description=CAGE_peak_11_at_CDK5RAP2_5end|id=chr9:123165695..123165711,-|ontology_enrichment_celltype=CL:0002194!4.34e-12!63;CL:0000576!4.34e-12!63;CL:0000040!4.34e-12!63;CL:0000559!4.34e-12!63;CL:0002057!7.67e-12!42;CL:0002009!2.18e-11!65;CL:0000766!8.57e-11!76;CL:0000860!1.73e-10!45;CL:0000839!7.87e-10!70;CL:0000557!1.51e-09!71|ontology_enrichment_celltype_v019=CL:0000860;1.52e-22;33!CL:0002057;1.52e-22;33!CL:0000473;6.03e-17;39!CL:0000234;6.03e-17;39!CL:0000576;1.46e-14;48!CL:0000766;4.62e-09;69|ontology_enrichment_celltype_v019_2=CL:0000860,2.88e-19,42;CL:0002057,2.88e-19,42;CL:0000473,1.14e-18,48;CL:0000234,1.14e-18,48;CL:0002194,5.11e-18,59;CL:0000576,5.11e-18,59;CL:0000040,5.11e-18,59;CL:0000559,5.11e-18,59;CL:0000766,9.27e-18,72;CL:0002009,2.75e-17,61;CL:0000839,1.19e-15,66;CL:0000557,2.36e-15,67;CL:0000763,3.17e-10,108;CL:0000049,3.17e-10,108;CL:0002087,3.19e-08,115;CL:0000738,4.03e-08,136;CL:0002031,1.06e-07,120|ontology_enrichment_development_v019=CL:0002057;7.34e-16;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!2.47e-08!115;UBERON:0002390!2.82e-08!102;UBERON:0003061!2.82e-08!102;UBERON:0002371!2.21e-07!80;UBERON:0002193!3.71e-07!112|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.56e-16,98;UBERON:0003061,7.56e-16,98;UBERON:0002193,2.43e-15,108;UBERON:0002371,5.01e-13,76;UBERON:0002405,1.35e-12,93;UBERON:0001474,9.24e-12,82;UBERON:0004765,2.44e-10,90;UBERON:0001434,6.91e-09,100;UBERON:0003081,7.30e-07,203|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,0,5.06599756336621,0,0,0,0,0,0,0.247532705920093,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0.447830948479849,1.6194683300949,1.54545340580512,0.436194716338694,1.13362783106643,0,0.697287110717054,1.23350366406548,0.309706370895104,2.8769239232215,1.2808035326455,1.6553756092201,0,0,0,0.564727018627814,1.91034305040492,0.224723484445085,0.918251677112708,0.641858054152187,0,4.61791820261403,1.59570926097305,0.852449501065388,1.16083695451434,4.53908179752912,2.4912889959823,1.00499466102697,2.08593167368081,0.434377689410233,1.81619850790011,5.15588690382591,2.84816148696796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0.649094787309367,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75560528296651,0,0,0.12663051166458,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412210116953756,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0.982827216677626,0,0,0,0,0,0,0.100528972411631,0,0.651616610620649,0,0,0,0,0,0,0,0,0,0,1.63802985597466,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,3.57656445851882,0,0,0,0,0,0,0.57191197463259,0,0,0,1.06617584622764,0,0,0,0,0,0.502257091432126,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,4.97298616123243,0.858840442033979,0.500170521059677,0.542530047399471,0,0,0.157702415033935,0,0.300946099727719,0,0,0,0.184369168541703,0,1.95801157462741,0.686286847621712,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0.384417447767103,0,0.160853921143607,1.48418066444991,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0.34444334449382,0.364182336013434,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0.096670718292122,0.770243085573222,0.15350367472613,0.137836572484531,0.107420244868274,0.725083469571143,0.170453254832202,0.0890320356467374,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0.762520775695299,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0.975267478179181,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,1.50630081242847,0,0,0,0,1.01489521846434,0,1.13929437434833,0,2.05681136543097,1.29694662238543,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,7.91058596288446,0,0,0,0,0.102268682502155,0,0,0,1.43216939740487,0,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0.23056390438806,0,0,0,0.0915975934018623,0,0,0,0,0.451191321234361,0,0.335643173951685,0.37950746544837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.569219092059585,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55755 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18672 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=18bp_to_ENST00000433194_5end | |||
|coexpression_cluster_id=C125 | |||
|description=CAGE_peak_11_at_CDK5RAP2_5end | |||
|id=chr9:123165695..123165711,- | |||
|ontology_enrichment_celltype=CL:0002194!4.34e-12!63;CL:0000576!4.34e-12!63;CL:0000040!4.34e-12!63;CL:0000559!4.34e-12!63;CL:0002057!7.67e-12!42;CL:0002009!2.18e-11!65;CL:0000766!8.57e-11!76;CL:0000860!1.73e-10!45;CL:0000839!7.87e-10!70;CL:0000557!1.51e-09!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.52e-22;33!CL:0002057;1.52e-22;33!CL:0000473;6.03e-17;39!CL:0000234;6.03e-17;39!CL:0000576;1.46e-14;48!CL:0000766;4.62e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.88e-19,42;CL:0002057,2.88e-19,42;CL:0000473,1.14e-18,48;CL:0000234,1.14e-18,48;CL:0002194,5.11e-18,59;CL:0000576,5.11e-18,59;CL:0000040,5.11e-18,59;CL:0000559,5.11e-18,59;CL:0000766,9.27e-18,72;CL:0002009,2.75e-17,61;CL:0000839,1.19e-15,66;CL:0000557,2.36e-15,67;CL:0000763,3.17e-10,108;CL:0000049,3.17e-10,108;CL:0002087,3.19e-08,115;CL:0000738,4.03e-08,136;CL:0002031,1.06e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;7.34e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.47e-08!115;UBERON:0002390!2.82e-08!102;UBERON:0003061!2.82e-08!102;UBERON:0002371!2.21e-07!80;UBERON:0002193!3.71e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.56e-16,98;UBERON:0003061,7.56e-16,98;UBERON:0002193,2.43e-15,108;UBERON:0002371,5.01e-13,76;UBERON:0002405,1.35e-12,93;UBERON:0001474,9.24e-12,82;UBERON:0004765,2.44e-10,90;UBERON:0001434,6.91e-09,100;UBERON:0003081,7.30e-07,203 | |||
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| |||
|short_description=p11@CDK5RAP2 | |||
}} |
Revision as of 07:14, 14 September 2013
Short description: | p11@CDK5RAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_CDK5RAP2_5end |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | 18bp_to_ENST00000433194_5end |
EntrezGene: | CDK5RAP2 |
HGNC: | 18672 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.88e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.88e-19 | 42 |
defensive cell | 1.14e-18 | 48 |
phagocyte | 1.14e-18 | 48 |
monopoietic cell | 5.11e-18 | 59 |
monocyte | 5.11e-18 | 59 |
monoblast | 5.11e-18 | 59 |
promonocyte | 5.11e-18 | 59 |
myeloid leukocyte | 9.27e-18 | 72 |
macrophage dendritic cell progenitor | 2.75e-17 | 61 |
myeloid lineage restricted progenitor cell | 1.19e-15 | 66 |
granulocyte monocyte progenitor cell | 2.36e-15 | 67 |
myeloid cell | 3.17e-10 | 108 |
common myeloid progenitor | 3.17e-10 | 108 |
nongranular leukocyte | 3.19e-08 | 115 |
leukocyte | 4.03e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 1.06e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.56e-16 | 98 |
blood island | 7.56e-16 | 98 |
hemolymphoid system | 2.43e-15 | 108 |
bone marrow | 5.01e-13 | 76 |
immune system | 1.35e-12 | 93 |
bone element | 9.24e-12 | 82 |
skeletal element | 2.44e-10 | 90 |
skeletal system | 6.91e-09 | 100 |
lateral plate mesoderm | 7.30e-07 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.