FFCP PHASE1:Hg19::chr12:10205220..10205239,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-46bp_to_AB590792_5end | |||
|coexpression_cluster_id=C156 | |||
|description=CAGE_peak_4_at_AB590792_5end | |||
|id=chr12:10205220..10205239,+ | |||
|ontology_enrichment_celltype=CL:0000094!1.15e-14!8;CL:0000081!2.50e-10!11;CL:0000775!1.60e-08!3;CL:0000767!1.14e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.56e-14;3!CL:0000094;4.83e-12;8!CL:0000946;8.62e-12;1!CL:0000786;8.62e-12;1!CL:0000037;2.07e-11;1!CL:0001024;2.07e-11;1!CL:0000081;6.71e-09;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.62e-14,3;CL:0000094,4.75e-12,8;CL:0000946,8.62e-12,1;CL:0000786,8.62e-12,1;CL:0000980,8.62e-12,1;CL:0001024,1.78e-11,1;CL:0000081,6.62e-09,11 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.46e-56!115;UBERON:0001049!2.73e-30!57;UBERON:0005068!2.73e-30!57;UBERON:0006241!2.73e-30!57;UBERON:0007135!2.73e-30!57;UBERON:0002616!5.09e-25!59;UBERON:0002780!2.02e-23!41;UBERON:0001890!2.02e-23!41;UBERON:0006240!2.02e-23!41;UBERON:0003080!1.01e-22!42;UBERON:0000955!1.22e-21!69;UBERON:0006238!1.22e-21!69;UBERON:0001017!3.67e-21!82;UBERON:0003075!5.93e-20!86;UBERON:0007284!5.93e-20!86;UBERON:0005743!8.77e-20!86;UBERON:0001893!3.58e-19!34;UBERON:0002346!1.12e-18!90;UBERON:0002791!8.10e-18!33;UBERON:0002020!3.73e-17!34;UBERON:0003528!3.73e-17!34;UBERON:0000073!4.14e-17!94;UBERON:0001016!4.14e-17!94;UBERON:0001869!5.46e-16!32;UBERON:0002619!3.53e-14!22;UBERON:0003056!8.05e-14!61;UBERON:0000153!1.39e-13!129;UBERON:0007811!1.39e-13!129;UBERON:0000033!1.78e-12!123;UBERON:0000178!1.98e-12!15;UBERON:0000179!1.98e-12!15;UBERON:0000463!1.98e-12!15;UBERON:0000956!3.53e-12!25;UBERON:0000203!3.53e-12!25;UBERON:0001950!5.58e-11!20;UBERON:0003076!1.16e-08!15;UBERON:0003057!1.16e-08!15;UBERON:0004121!1.25e-08!169;UBERON:0004177!2.17e-08!7;UBERON:0000924!3.09e-08!173;UBERON:0006601!3.09e-08!173;UBERON:0000349!6.35e-08!5;UBERON:0002298!1.07e-07!8;UBERON:0002106!2.86e-07!3;UBERON:0004854!2.86e-07!3;UBERON:0009034!2.86e-07!3;UBERON:0002095!2.86e-07!3;UBERON:0004782!2.86e-07!3;UBERON:0003281!2.86e-07!3;UBERON:0009664!2.86e-07!3;UBERON:0002296!2.86e-07!3;UBERON:0005602!2.86e-07!3;UBERON:0001179!2.86e-07!3;UBERON:0006293!2.86e-07!3;UBERON:0001871!4.44e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.46e-23;15!UBERON:0000179;1.46e-23;15!UBERON:0000463;1.46e-23;15!UBERON:0002390;2.16e-21;32!UBERON:0002370;1.74e-20;2!UBERON:0005058;1.74e-20;2!UBERON:0009113;1.74e-20;2!UBERON:0002193;1.44e-12;42!UBERON:0004177;9.20e-09;5!UBERON:0005057;9.20e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.52e-23,15;UBERON:0000179,1.52e-23,15;UBERON:0000463,1.52e-23,15;UBERON:0002370,9.90e-11,4;UBERON:0005058,9.90e-11,4;UBERON:0009113,9.90e-11,4;UBERON:0003295,9.90e-11,4;UBERON:0005562,9.90e-11,4;UBERON:0003351,1.92e-07,6;UBERON:0002390,6.17e-07,98;UBERON:0003061,6.17e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.619264493264304,0,0,0,0,0,2.93600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.383959833463255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,2.24702107184155,5.9832291840805,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02979043692868,3.82318603571188,2.27858874869665,1.42939065274673,0.822724546172388,0.648473311192717,3.24018862342869,1.58625035258854,0,0,0,0,0,0,0,0.798317485731266,1.34053759092657,0,0,0,0,0,0,6.09450400085772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0.844175070377856,0,0.110579259931225,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,6.43619051219602,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.808813595768125,0,0.702793337176017,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0,0.303747783290123,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.79339561045614,0,0,0.213574825135389,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.665574309221114,0.745156835296601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.638535436228605,0.205116364240755,0,0.207471757392654,0.645902582527404,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.135075169236789,0,1.2401207790071,0.317079050969534,0,0,0,0,0,0,0.336283722218824,0,0,0,11.1776967929106,0,0.815636795721981,0,0,0,0.313972371402056,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.437119121007915,0,0,0,0.196308467114945,0.297046400327086,0,0,0.657887425858975,0.257831551894309,0.0999411559249289,0,0,0,0,0.458729283404541,0.716697915757256,0,0.271965960763659,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.413731983447581,0,0,1.93766729508018,1.05527014302958,0,0,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,1.61019034872821,0 | |||
|short_description=p4@AB590792 | |||
}} |
Revision as of 12:04, 11 January 2014
Short description: | p4@AB590792 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AB590792_5end |
Coexpression cluster: | C156_plasma_splenic_hereditary_B_large_xeroderma_b |
Association with transcript: | -46bp_to_AB590792_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.62e-14 | 3 |
granulocyte | 4.75e-12 | 8 |
antibody secreting cell | 8.62e-12 | 1 |
plasma cell | 8.62e-12 | 1 |
plasmablast | 8.62e-12 | 1 |
CD34-positive, CD38-negative hematopoietic stem cell | 1.78e-11 | 1 |
blood cell | 6.62e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
blood | 1.52e-23 | 15 |
haemolymphatic fluid | 1.52e-23 | 15 |
organism substance | 1.52e-23 | 15 |
thymus | 9.90e-11 | 4 |
hemolymphoid system gland | 9.90e-11 | 4 |
thymic region | 9.90e-11 | 4 |
pharyngeal gland | 9.90e-11 | 4 |
thymus primordium | 9.90e-11 | 4 |
pharyngeal epithelium | 1.92e-07 | 6 |
hematopoietic system | 6.17e-07 | 98 |
blood island | 6.17e-07 | 98 |