FFCP PHASE1:Hg19::chr12:124457151..124457160,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80212 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29563 | |||
|TSSclassifier=strong | |||
|UniProt=F5H2Z7,Q53HC0 | |||
|association_with_transcript=2bp_to_ENST00000535556,NM_025140,uc001ufw.1,uc001ufx.1,uc001ufy.1_5end | |||
|description=CAGE_peak_9_at_CCDC92_5end | |||
|id=chr12:124457151..124457160,- | |||
|ontology_enrichment_celltype=CL:0000057!1.29e-09!75;CL:0000055!9.83e-08!180 | |||
|ontology_enrichment_celltype_v019=CL:0000669;9.72e-10;4!CL:0002556;1.96e-09;6!CL:0000136;2.97e-08;13!CL:0000515;5.32e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002556,7.60e-10,6;CL:0000669,3.87e-09,4;CL:0000057,3.88e-08,76;CL:0000136,4.24e-07,15;CL:0000197,8.54e-07,6;CL:0000098,8.54e-07,6;CL:0002167,8.54e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!7.14e-10!365;UBERON:0000468!1.64e-07!659;UBERON:0000467!5.77e-07!625;UBERON:0000480!8.31e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0000075;1.40e-09;16!UBERON:0001758;1.96e-09;6!UBERON:0003672;1.96e-09;6!UBERON:0004905;2.24e-09;8!UBERON:0000982;2.24e-09;8!UBERON:0004770;2.24e-09;8!UBERON:0003129;5.10e-08;7!UBERON:0001434;2.68e-07;36!UBERON:0011135;5.02e-07;5!UBERON:0002216;5.02e-07;5!UBERON:0011134;5.02e-07;5!UBERON:0002209;5.02e-07;5!UBERON:0002213;5.02e-07;5!UBERON:0007844;5.02e-07;5!UBERON:0011138;5.02e-07;5!UBERON:0001130;5.02e-07;5!UBERON:0001066;5.02e-07;5!UBERON:0001468;5.02e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000075,5.90e-10,16;UBERON:0001758,7.60e-10,6;UBERON:0003672,7.60e-10,6;UBERON:0004905,1.31e-09,8;UBERON:0000982,1.31e-09,8;UBERON:0004770,1.31e-09,8;UBERON:0003129,2.30e-08,7;UBERON:0011135,3.34e-07,5;UBERON:0002216,3.34e-07,5;UBERON:0011134,3.34e-07,5;UBERON:0002209,3.34e-07,5;UBERON:0002213,3.34e-07,5;UBERON:0005856,3.34e-07,5;UBERON:0005866,3.34e-07,5;UBERON:0005863,3.34e-07,5;UBERON:0007844,3.34e-07,5;UBERON:0011138,3.34e-07,5;UBERON:0001130,3.34e-07,5;UBERON:0001066,3.34e-07,5;UBERON:0001468,3.34e-07,5;UBERON:0011137,3.75e-07,14 | |||
|phase1_expression=1.2717486548939,0.428201047781966,0.704772020479856,2.00146596706261,0.446961094427288,0.872338524100369,0,0,1.56711376919903,0,0.697801167972428,0.218441372130172,0.263766978228454,1.11389717664042,1.98838425436749,0.672325146451775,0,0,0.487932798790507,0.246242116153576,0.816002764977012,0,0.572471974262113,0.547497700291537,0.376627918784408,0,0,0,0,0,0.309632246632152,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0,0,0.401088894940283,0.217010870715852,0.447830948479849,1.29557466407592,0.77272670290256,0.145398238779565,0.377875943688809,0,0,0,0.309706370895104,0,0.512321413058201,0.236482229888585,0.689491361473237,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0.598390972864896,0.426224750532694,0,0,0,0.251248665256743,0,0,1.21079900526674,0.368277635987565,0,0,0,0,0,0.300353785683013,0,0,0.19891667719909,0,0,0,0,0.426730222566507,0.800791974072025,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0.651844533267181,0,0,0,0,0.221533894583621,0,0.25618263945135,0,0,0.276350017785848,0,0,0.267540828089713,0,0.113309342697566,0,0,0,0.318565414324097,0,0.950452044448374,0,0.383959833463255,0,0,0,0,0.534880391567015,0.289648807765598,0,0,0.12786256184353,1.0843174571537,1.50401373190767,1.01392563272577,0,0.486634870302636,0,0.221729397462564,0.263504357079378,0.458426764241994,0.364295288292542,0.370784442784429,0.324547393654683,0.174129737299267,0.26591592103773,0,0,0.371457501329565,0,0,0,0,0.838998872419812,0,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0.24406205754817,0.735326160691737,0,0.0892997282840798,0,0.112611480483322,0,0,0.366403487860815,0,0,0.436094052142534,0,0.633152558322899,0.662045904066094,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0.311211035399766,1.34710672069688,0.490385709340376,0.756787138224657,0.576175924479999,0.937285727335186,0.312160076830321,0,0.896692083310806,0.23486899728753,0.323745888736263,0.140450806702248,1.02077085627447,0.491337269247072,2.27316718586684,0,1.23633464639278,3.64064544775211,0.718618141816238,1.5150250255866,1.62654075833553,0.831192346452549,2.19488810440419,2.14541457059314,1.35214253015937,0,0.538168907066586,0.427114777637135,0.423863802319124,0,1.75189299705346,1.03056216018252,1.11670113798954,0.506328996723799,0.584622030967192,0,0.736399189138395,0.969876340912871,0,1.5112814734146,0.508681776931463,0.193260853163297,0.818238361772504,0.286804595389004,0,0,0,0,0.252320850875628,0.36497735907583,0,0.643240938192885,1.38134921352481,0,0,0,0.168584690078102,0,0,0,0.237270619111097,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0.343135620597051,0.658501712451753,0,0.201057944823262,0.277765335475589,0.325808305310325,1.03993478527958,0,0.231860809950154,0.117408694235822,0.144366447761074,0.462985512576611,0.190254152234598,0,0.858486162094873,0.246217006087397,0.468008530278475,0.297262324577456,0,0.335964256397719,0.425325291727159,0.0895585227028483,0.290633938513962,0.383382679165211,0,0.176096868026452,1.03664057770386,1.8735593944205,2.39860623510122,0.063497894292169,1.14596527667483,0,0,0.102827492703324,0,0.285826432630578,0.336393253036082,0.43596006883328,0.1466765716419,0.387815147273333,0,0,0,0,0.771622122786426,0,0.266422179016099,0.285955987316295,0,0,0,0.355391948742546,0,0.301439377059586,0.871533458600294,0.499864955910285,1.2162378064119,0.502257091432126,0,0.479249710983165,0,0,1.59259437334337,1.2328579353023,1.61154866915906,0,0,0,0.385029108839245,0.508189248444927,1.30139853857622,0,0,0,0,0,0,1.2269149171914,0.500170521059677,1.35632511849868,2.07970861530807,2.14114786556594,1.89242898040722,2.10854546986884,0.902838299183157,0,0,0.664225598535437,0.553107505625109,0.347534457872331,2.34961388955289,1.02943027143257,0.413536052245775,0.215714200818617,0.106727557803444,0,0,0.604780586659361,0.744323423456331,0.61384789315225,1.12264037773229,1.15325234330131,0.511707249066704,1.12597744800525,0,0.154209693802656,0.177561725313127,0.492762936082855,0,0.813472649219715,0.120859449591622,0.200506470303285,0.276242966807689,1.14814448164607,0.364182336013434,1.04899531967539,0,0.693138033939733,0.784349769176855,0,0.73886140225013,1.13733384070897,0,0.215915916102139,0,1.08378575017541,3.01013864312912,0,0.831076008928724,0.223874754722178,0,0,0,0.328014645699706,0.650756789328606,0.103041011647722,0.366277859273374,0.41254749960294,0.574265537996172,0.650060246036521,0,0.870036464629098,0.308097234229289,0.460511024178389,0.275673144969061,0.107420244868274,0.580066775656914,0.426133137080504,0.267096106940212,0.330569830721956,0.384380134730212,0.127612712494584,0.30347334256665,0.929691098594572,0.31481234683064,0,0,0,0.869932992075073,0.37064843820784,0,0,0.632758849437452,0,0.511795582622668,1.28381696410176,0.636406495851874,0,0.359744915166629,0.274537029736055,0.353437207037059,0.808729926293264,0,0.842516912477962,0,0.243713489631284,0,1.22849920267187,0.848432591722276,2.26016233240486,0.551365343546124,0,0.876901770507525,0.578775534266688,0,1.42037263873893,0.30982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| |||
|short_description=p9@CCDC92 | |||
}} |
Revision as of 16:35, 11 January 2014
Short description: | p9@CCDC92 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CCDC92_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_ENST00000535556, NM_025140, uc001ufw.1, uc001ufx.1, uc001ufy.1_5end |
EntrezGene: | CCDC92 |
HGNC: | 29563 |
UniProt: | F5H2Z7Q53HC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of periodontium | 7.60e-10 | 6 |
pericyte cell | 3.87e-09 | 4 |
fibroblast | 3.88e-08 | 76 |
fat cell | 4.24e-07 | 15 |
receptor cell | 8.54e-07 | 6 |
sensory epithelial cell | 8.54e-07 | 6 |
olfactory epithelial cell | 8.54e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
subdivision of skeletal system | 5.90e-10 | 16 |
periodontium | 7.60e-10 | 6 |
dentition | 7.60e-10 | 6 |
articulation | 1.31e-09 | 8 |
skeletal joint | 1.31e-09 | 8 |
articular system | 1.31e-09 | 8 |
skull | 2.30e-08 | 7 |
intervertebral cartilage | 3.34e-07 | 5 |
symphysis | 3.34e-07 | 5 |
nonsynovial joint | 3.34e-07 | 5 |
fibrous joint | 3.34e-07 | 5 |
cartilaginous joint | 3.34e-07 | 5 |
developing mesenchymal condensation | 3.34e-07 | 5 |
pre-cartilage condensation | 3.34e-07 | 5 |
cartilaginous condensation | 3.34e-07 | 5 |
cartilage element | 3.34e-07 | 5 |
post-cranial axial skeletal system | 3.34e-07 | 5 |
vertebral column | 3.34e-07 | 5 |
intervertebral disk | 3.34e-07 | 5 |
intervertebral joint | 3.34e-07 | 5 |
axial skeletal system | 3.75e-07 | 14 |