FFCP PHASE1:Hg19::chr12:132863007..132863039,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50614 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4131 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc001ukb.2_5end | |||
|description=CAGE_peak_2_at_GALNT9_5end | |||
|id=chr12:132863007..132863039,- | |||
|ontology_enrichment_celltype=CL:0000077!1.93e-15!19;CL:0000076!4.21e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000077;2.60e-30;19!CL:0002097;4.63e-11;2!CL:0000082;4.61e-09;19!CL:0000632;8.88e-08;3!CL:0000322;9.81e-08;3!CL:0000174;1.20e-07;3!CL:0002586;3.34e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.20e-30,19;CL:0000076,9.08e-13,63;CL:0000066,2.66e-12,253;CL:0002097,4.52e-11,2;CL:0000082,4.65e-09,19;CL:0000213,1.79e-08,58;CL:0000215,1.79e-08,58;CL:0000632,8.17e-08,3;CL:0000322,9.34e-08,3;CL:0000174,1.18e-07,3;CL:0002586,3.56e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.55e-09;30!UBERON:0003918;7.53e-08;10!UBERON:0007687;7.53e-08;10 | |||
|ontology_enrichment_disease=DOID:305!2.44e-08!106;DOID:0050687!4.01e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1324;1.20e-11;15!DOID:3910;3.42e-11;2!DOID:0050615;7.02e-11;16!DOID:3111;9.90e-07;1!DOID:3603;9.90e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.18e-14,143;DOID:305,3.11e-14,106;DOID:162,1.50e-12,235;DOID:14566,3.72e-12,239;DOID:1324,1.21e-11,15;DOID:3910,3.17e-11,2;DOID:0050615,7.09e-11,16;DOID:3111,9.91e-07,1;DOID:3603,9.91e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001048!7.81e-10!168;UBERON:0000966!7.73e-08!5;UBERON:0005388!7.73e-08!5;UBERON:0001802!7.73e-08!5;UBERON:0000058!2.50e-07!26;UBERON:0000481!4.29e-07!347;UBERON:0003135!6.38e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000058;1.92e-17;10!UBERON:0002394;6.72e-12;4!UBERON:0003928;6.72e-12;4!UBERON:0004903;3.42e-11;2!UBERON:0002173;3.42e-11;2!UBERON:0002186;3.42e-11;2!UBERON:0004802;4.61e-09;19!UBERON:0000115;4.61e-09;19!UBERON:0002048;9.68e-08;22!UBERON:0004807;9.68e-08;22!UBERON:0000117;9.68e-08;22!UBERON:0000171;9.68e-08;22!UBERON:0000170;9.68e-08;22!UBERON:0004821;9.81e-08;3!UBERON:0007499;9.81e-08;3!UBERON:0003215;9.81e-08;3!UBERON:0010368;9.81e-08;3!UBERON:0009911;9.81e-08;3!UBERON:0002299;9.81e-08;3!UBERON:0006524;9.81e-08;3!UBERON:0008874;9.81e-08;3!UBERON:0002169;9.81e-08;3!UBERON:0004894;9.81e-08;3!UBERON:0002369;1.20e-07;3!UBERON:0001235;1.20e-07;3!UBERON:0006858;1.20e-07;3!UBERON:0001781;3.34e-07;3!UBERON:0001782;3.34e-07;3!UBERON:0002294;5.54e-07;7!UBERON:0001173;5.54e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,3.17e-11,2;UBERON:0002173,3.17e-11,2;UBERON:0002186,3.17e-11,2;UBERON:0007499,4.54e-09,25;UBERON:0004802,4.65e-09,19;UBERON:0000115,4.65e-09,19;UBERON:0000058,6.41e-09,19;UBERON:0009856,1.10e-08,26;UBERON:0002394,3.97e-08,6;UBERON:0003928,3.97e-08,6;UBERON:0004821,9.34e-08,3;UBERON:0003215,9.34e-08,3;UBERON:0010368,9.34e-08,3;UBERON:0009911,9.34e-08,3;UBERON:0002299,9.34e-08,3;UBERON:0006524,9.34e-08,3;UBERON:0008874,9.34e-08,3;UBERON:0002169,9.34e-08,3;UBERON:0004894,9.34e-08,3;UBERON:0002048,9.74e-08,22;UBERON:0000117,9.74e-08,22;UBERON:0000171,9.74e-08,22;UBERON:0000170,9.74e-08,22;UBERON:0005597,9.74e-08,22;UBERON:0000118,9.74e-08,22;UBERON:0002369,1.18e-07,3;UBERON:0001235,1.18e-07,3;UBERON:0006858,1.18e-07,3;UBERON:0005911,1.49e-07,82;UBERON:0001782,3.56e-07,3;UBERON:0005424,3.56e-07,3;UBERON:0001041,4.44e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.511450247374121,0,0,0,0,0,0.0945348171640679,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.933633106199299,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,3.7041661019826,4.41026134156626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672786506072164,0,0.36669142910475,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0.710783897485092,0,0.904318131178758,0.871533458600294,3.499054691372,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,1.28225062558195,1.31205858279882,0.325378394664303,0.309123034943167,0,0,0,0,0,0.096670718292122,0.770243085573222,0.307007349452259,0,0,0.145016693914229,0.255679882248303,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.38753981696674,0,0,0.614321404198464,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,1.52776196950456,9.13007990845607,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,2.2882828526349,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.568679216656392,0,0,0.664653872707185,0,0,0,0,0,0,0.195984794828755,0,0.52418000472609,2.23581842213102,1.9351266257817,1.0232504392066,2.13500188338344,0,0,0,0,0,0,0.195551382734803,0,0,0.799238438328521,0,0,0,0,0.124252535565433,0.235694034616795,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,1.10327990218877,1.41627387964495,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0.679872549120754,0,0,0,0,2.05304205461195,1.40963004463334,0,0.157204305099666,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,0,0,1.17632909849086,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0.450772826991655,1.52322084867518,0.813741466409323,0,0,0,0.398095888698616,0,0,0,0,1.34833881285112,19.9430679978681,4.17590867144339,0,0,0.489473409012935,0,11.7344549921169,6.57852148736121,1.41351316756705,18.5197476740078,8.10923715134749,6.40603796469867,2.41801239211839,0,0,0,0,0,0,0,27.2592639132629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,1.83428598521679,3.00366731990879,0,0,0,0.902523940191087,0,0,0,0,3.10497781055795,0,0,0,0,0,0,0.992422356778588,0,0.511049710558381,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0.156986185701028,0,0,0,3.23891386827932,0,0.643288897589907,0.316027223465453,0,0,0,0,0,0,0,0,0,1.27016115057279,2.06196181689645,0,0,0.111855431797792,2.25745537315059,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0.0771741581079447,0.874238242015829,0,0,0,0,0,0,0.169927114687817,0.0939839179798536,0.515663103788617,0,0,0,15.245859670942,0.730336388246517,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0.0757786982182394,0.267964130156178,0,0.103432995861895,0,0.23806443146374,0,0.372448285775147,0,1.20929600728513,1.0105859447911,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.366724332548599,0,0,0.402547587182052,0 | |||
|short_description=p2@GALNT9 | |||
}} |
Revision as of 16:46, 11 January 2014
Short description: | p2@GALNT9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GALNT9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001ukb.2_5end |
EntrezGene: | GALNT9 |
HGNC: | 4131 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.20e-30 | 19 |
squamous epithelial cell | 9.08e-13 | 63 |
epithelial cell | 2.66e-12 | 253 |
cortical cell of adrenal gland | 4.52e-11 | 2 |
epithelial cell of lung | 4.65e-09 | 19 |
lining cell | 1.79e-08 | 58 |
barrier cell | 1.79e-08 | 58 |
hepatic stellate cell | 8.17e-08 | 3 |
pneumocyte | 9.34e-08 | 3 |
steroid hormone secreting cell | 1.18e-07 | 3 |
retinal pigment epithelial cell | 3.56e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 3.17e-11 | 2 |
alveolar duct | 3.17e-11 | 2 |
bronchiole | 3.17e-11 | 2 |
epithelial sac | 4.54e-09 | 25 |
respiratory tract epithelium | 4.65e-09 | 19 |
lung epithelium | 4.65e-09 | 19 |
duct | 6.41e-09 | 19 |
sac | 1.10e-08 | 26 |
bile duct | 3.97e-08 | 6 |
digestive system duct | 3.97e-08 | 6 |
pulmonary alveolus epithelium | 9.34e-08 | 3 |
alveolus | 9.34e-08 | 3 |
pulmonary lobule | 9.34e-08 | 3 |
lobule | 9.34e-08 | 3 |
alveolus of lung | 9.34e-08 | 3 |
alveolar system | 9.34e-08 | 3 |
pulmonary acinus | 9.34e-08 | 3 |
alveolar sac | 9.34e-08 | 3 |
alveolar wall | 9.34e-08 | 3 |
lung | 9.74e-08 | 22 |
respiratory tube | 9.74e-08 | 22 |
respiration organ | 9.74e-08 | 22 |
pair of lungs | 9.74e-08 | 22 |
lung primordium | 9.74e-08 | 22 |
lung bud | 9.74e-08 | 22 |
adrenal gland | 1.18e-07 | 3 |
adrenal cortex | 1.18e-07 | 3 |
adrenal/interrenal gland | 1.18e-07 | 3 |
endo-epithelium | 1.49e-07 | 82 |
pigmented layer of retina | 3.56e-07 | 3 |
presumptive retinal pigmented epithelium | 3.56e-07 | 3 |
foregut | 4.44e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.18e-14 | 143 |
carcinoma | 3.11e-14 | 106 |
cancer | 1.50e-12 | 235 |
disease of cellular proliferation | 3.72e-12 | 239 |
lung cancer | 1.21e-11 | 15 |
lung adenocarcinoma | 3.17e-11 | 2 |
respiratory system cancer | 7.09e-11 | 16 |
cystadenocarcinoma | 9.91e-07 | 1 |
mucinous cystadenocarcinoma | 9.91e-07 | 1 |