FFCP PHASE1:Hg19::chr12:54384370..54384382,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3223 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5128 | |||
|TSSclassifier=strong | |||
|UniProt=D6RBH4 | |||
|association_with_transcript=-25bp_to_ENST00000504315_5end | |||
|coexpression_cluster_id=C321 | |||
|description=CAGE_peak_5_at_HOXC6_5end | |||
|id=chr12:54384370..54384382,+ | |||
|ontology_enrichment_celltype=CL:0002564!9.54e-08!3;CL:0000594!3.79e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002602;6.50e-13;2!CL:0002588;1.20e-12;2!CL:0002569;1.96e-09;6!CL:0002564;2.19e-08;3!CL:0000594;2.19e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002602,7.54e-13,2;CL:0002588,9.55e-13,2;CL:0002569,1.72e-09,6;CL:0002564,1.50e-08,3;CL:0000594,2.11e-08,3;CL:0002563,8.95e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003918;2.62e-09;10!UBERON:0007687;2.62e-09;10!UBERON:0008425;1.64e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!1.69e-10!27;UBERON:0003918!1.69e-10!27;UBERON:0005095!1.69e-10!27;UBERON:0007687!1.69e-10!27;UBERON:0000489!5.39e-10!32;UBERON:0003586!6.48e-08!5;UBERON:0002242!9.54e-08!3;UBERON:0003068!9.54e-08!3;UBERON:0002328!9.54e-08!3;UBERON:0004880!9.54e-08!3;UBERON:0006554!2.53e-07!44;UBERON:0001008!4.39e-07!45;UBERON:0003104!7.11e-07!238;UBERON:0009142!7.11e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;1.14e-18;5!UBERON:0002216;1.14e-18;5!UBERON:0011134;1.14e-18;5!UBERON:0002209;1.14e-18;5!UBERON:0002213;1.14e-18;5!UBERON:0007844;1.14e-18;5!UBERON:0011138;1.14e-18;5!UBERON:0001130;1.14e-18;5!UBERON:0001066;1.14e-18;5!UBERON:0001468;1.14e-18;5!UBERON:0004905;4.04e-18;8!UBERON:0000982;4.04e-18;8!UBERON:0004770;4.04e-18;8!UBERON:0006444;6.50e-13;2!UBERON:0001995;6.50e-13;2!UBERON:0004715;6.50e-13;2!UBERON:0003422;1.96e-09;6!UBERON:0002418;6.78e-09;3!UBERON:0004755;6.78e-09;3!UBERON:0002242;2.19e-08;3!UBERON:0003104;3.78e-08;7!UBERON:0009142;3.78e-08;7!UBERON:0006834;6.68e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,8.08e-19,5;UBERON:0002216,8.08e-19,5;UBERON:0011134,8.08e-19,5;UBERON:0002209,8.08e-19,5;UBERON:0002213,8.08e-19,5;UBERON:0005856,8.08e-19,5;UBERON:0005866,8.08e-19,5;UBERON:0005863,8.08e-19,5;UBERON:0007844,8.08e-19,5;UBERON:0011138,8.08e-19,5;UBERON:0001130,8.08e-19,5;UBERON:0001066,8.08e-19,5;UBERON:0001468,8.08e-19,5;UBERON:0004905,3.10e-18,8;UBERON:0000982,3.10e-18,8;UBERON:0004770,3.10e-18,8;UBERON:0006444,7.54e-13,2;UBERON:0001995,7.54e-13,2;UBERON:0004715,7.54e-13,2;UBERON:0003422,1.72e-09,6;UBERON:0002418,7.48e-09,3;UBERON:0004755,7.48e-09,3;UBERON:0002242,1.50e-08,3;UBERON:0003068,1.50e-08,3;UBERON:0002328,1.50e-08,3;UBERON:0004880,1.50e-08,3;UBERON:0003104,7.76e-07,160;UBERON:0009142,7.76e-07,160;UBERON:0006834,8.18e-07,1;UBERON:0001242,8.95e-07,4;UBERON:0001262,8.95e-07,4;UBERON:0004786,8.95e-07,4;UBERON:0004808,8.95e-07,4;UBERON:0001277,8.95e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,3.21792517696121,2.31978163009541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0.704606991862589,0.323745888736263,0.140450806702248,0,0,0,0,0,0.910161361938026,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,1.03056216018252,0.744467425326359,2.86919764810153,2.72823614451356,0,0,0,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72183813960359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771622122786426,0,1.0656887160644,0,11.9376753186117,4.93944202068461,0,0,1.58390374586686,0,0,0,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71768088406796,1.50051156317903,0.813795071099207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0.966875596732978,0,0,0,0,0,0,0.0770153371044148,0.784349769176855,0,0.211103257785751,0,0,0,0,2.70946437543853,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,1.07420244868274,1.59518363305651,0.0852266274161009,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563391205064483,5.87986544036611,1.57198465620994,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,5.23437948524618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,1.15362711958732,40.1138275443188,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,0,0,18.2791399992049,0,0,0,0.236387681767936,0.344743373241465,0,2.2571249341328,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,2.81305231664718,0,0,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45163467956146,0,0,0,0,0,0,0,0,0,0.34945333648406,0.687944129886466,0,0,0,0.0969890164884194,0,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472834243795189,1.46872846777995,0,0,0,0,0,1.017074150619,0.542999601753713,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01444720027578,0.447764408660622,0.233713309847224,0.554805861502613,0.189403005275089,0.50313580350515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40376993627955,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0,0,0.560544326627578,0,0.431855182437243,0,0,0,8.60186547724127,0.869291361512897,0,0,0,0,0,0,0,0,0,0,0,0,1.27595303699816,0,0,0,0,0,0,0,0,0,0,1.66059127923341,0,0,0,0,0.471353094203252,0,0,2.9585900930838,0,0,0,0,0,0,0,0,0,0,31.8698555630233,0,0,0,0,0.462175628631418,0.865253124247578,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1001729976458,0.406896178315738,0,0,0 | |||
|short_description=p5@HOXC6 | |||
}} |
Revision as of 13:47, 11 January 2014
Short description: | p5@HOXC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HOXC6_5end |
Coexpression cluster: | C321_synovial_anaplastic_maxillary_glassy_keratoacanthoma_rhabdomyosarcoma_small |
Association with transcript: | -25bp_to_ENST00000504315_5end |
EntrezGene: | HOXC6 |
HGNC: | 5128 |
UniProt: | D6RBH4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
annulus pulposus cell | 7.54e-13 | 2 |
smooth muscle cell of the umbilical vein | 9.55e-13 | 2 |
mesenchymal stem cell of umbilical cord | 1.72e-09 | 6 |
nucleus pulposus cell of intervertebral disc | 1.50e-08 | 3 |
skeletal muscle satellite cell | 2.11e-08 | 3 |
intestinal epithelial cell | 8.95e-07 | 4 |