FFCP PHASE1:Hg19::chr14:78870030..78870098,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9369 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8010 | |||
|TSSclassifier=weak | |||
|UniProt=G3V4R9,Q9HDB5,Q9Y4C0 | |||
|association_with_transcript=0bp_to_ENST00000553631,ENST00000554719,NM_004796,uc001xun.2_5end | |||
|coexpression_cluster_id=C2316 | |||
|description=CAGE_peak_5_at_NRXN3_5end | |||
|id=chr14:78870030..78870098,+ | |||
|ontology_enrichment_celltype=CL:0000188!6.83e-07!9 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.04e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.49e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.47e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.48e-65!57;UBERON:0005068!1.48e-65!57;UBERON:0006241!1.48e-65!57;UBERON:0007135!1.48e-65!57;UBERON:0002616!7.18e-63!59;UBERON:0001017!5.64e-58!82;UBERON:0005743!9.77e-57!86;UBERON:0000955!4.96e-56!69;UBERON:0006238!4.96e-56!69;UBERON:0002780!1.23e-55!41;UBERON:0001890!1.23e-55!41;UBERON:0006240!1.23e-55!41;UBERON:0003080!4.75e-54!42;UBERON:0001893!2.81e-51!34;UBERON:0002020!4.13e-51!34;UBERON:0003528!4.13e-51!34;UBERON:0000073!8.18e-50!94;UBERON:0001016!8.18e-50!94;UBERON:0002791!2.60e-49!33;UBERON:0001869!1.26e-48!32;UBERON:0003075!3.43e-48!86;UBERON:0007284!3.43e-48!86;UBERON:0002346!2.44e-45!90;UBERON:0002619!4.03e-39!22;UBERON:0003056!1.03e-37!61;UBERON:0000956!8.92e-37!25;UBERON:0000203!8.92e-37!25;UBERON:0001950!1.15e-35!20;UBERON:0007023!1.38e-32!115;UBERON:0000153!5.97e-31!129;UBERON:0007811!5.97e-31!129;UBERON:0000033!4.86e-29!123;UBERON:0004121!1.46e-24!169;UBERON:0000924!1.32e-23!173;UBERON:0006601!1.32e-23!173;UBERON:0000025!4.55e-16!194;UBERON:0002420!5.82e-16!9;UBERON:0007245!5.82e-16!9;UBERON:0010009!5.82e-16!9;UBERON:0010011!5.82e-16!9;UBERON:0000454!5.82e-16!9;UBERON:0000483!1.07e-15!309;UBERON:0002308!1.47e-15!9;UBERON:0000125!1.47e-15!9;UBERON:0000119!2.35e-15!312;UBERON:0000200!5.43e-13!6;UBERON:0003076!1.30e-12!15;UBERON:0003057!1.30e-12!15;UBERON:0009663!1.75e-12!7;UBERON:0001871!2.95e-12!7;UBERON:0000477!1.40e-11!286;UBERON:0000475!5.68e-11!365;UBERON:0000064!7.12e-11!219;UBERON:0001872!1.35e-10!5;UBERON:0002298!1.46e-10!8;UBERON:0002021!1.91e-10!5;UBERON:0000349!1.95e-10!5;UBERON:0004111!4.68e-10!241;UBERON:0004733!9.32e-09!12;UBERON:0002028!9.32e-09!12;UBERON:0007277!9.32e-09!12;UBERON:0000369!1.68e-08!4;UBERON:0002435!1.68e-08!4;UBERON:0000204!1.68e-08!4;UBERON:0010082!1.68e-08!4;UBERON:0004732!5.80e-08!13;UBERON:0000481!1.35e-07!347;UBERON:0002771!3.44e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.22e-70;22!UBERON:0001950;3.61e-63;20!UBERON:0001869;4.88e-62;32!UBERON:0000956;6.49e-62;25!UBERON:0000203;6.49e-62;25!UBERON:0002791;3.21e-57;32!UBERON:0001893;6.52e-57;34!UBERON:0003528;1.80e-56;34!UBERON:0002020;1.80e-56;34!UBERON:0002780;8.09e-41;41!UBERON:0001890;8.09e-41;41!UBERON:0000073;8.45e-30;53!UBERON:0002616;8.45e-30;53!UBERON:0000200;2.60e-26;6!UBERON:0000955;1.73e-23;68!UBERON:0001871;2.34e-21;6!UBERON:0000349;1.16e-20;5!UBERON:0001017;1.25e-20;75!UBERON:0001872;1.87e-14;5!UBERON:0002021;1.93e-14;5!UBERON:0001870;4.56e-14;3!UBERON:0001016;5.17e-14;83!UBERON:0002420;2.44e-11;9!UBERON:0007245;2.44e-11;9!UBERON:0010009;2.44e-11;9!UBERON:0010011;2.44e-11;9!UBERON:0000454;2.44e-11;9!UBERON:0000369;5.58e-10;4!UBERON:0002435;5.58e-10;4!UBERON:0000204;5.58e-10;4!UBERON:0002771;8.07e-10;2!UBERON:0002702;9.00e-10;2!UBERON:0001876;3.53e-09;2!UBERON:0001954;4.17e-09;2!UBERON:0003022;4.17e-09;2!UBERON:0002421;4.17e-09;2!UBERON:0002600;4.17e-09;2!UBERON:0007023;1.99e-08;114!UBERON:0000125;1.77e-07;9!UBERON:0002308;1.77e-07;9!UBERON:0011216;4.55e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,9.61e-71,22;UBERON:0001869,7.66e-70,32;UBERON:0001893,1.64e-65,34;UBERON:0003528,4.72e-65,34;UBERON:0002020,4.72e-65,34;UBERON:0002791,9.98e-64,32;UBERON:0001950,2.84e-63,20;UBERON:0000956,5.26e-62,25;UBERON:0000203,5.26e-62,25;UBERON:0002780,2.86e-58,41;UBERON:0001890,2.86e-58,41;UBERON:0003080,2.86e-58,41;UBERON:0006240,2.86e-58,41;UBERON:0000073,1.53e-55,53;UBERON:0002616,1.53e-55,53;UBERON:0001049,2.92e-52,56;UBERON:0005068,2.92e-52,56;UBERON:0006241,2.92e-52,56;UBERON:0007135,2.92e-52,56;UBERON:0000955,2.04e-51,68;UBERON:0006238,2.04e-51,68;UBERON:0001017,3.15e-45,81;UBERON:0001016,4.55e-40,89;UBERON:0003056,1.76e-37,61;UBERON:0003075,9.15e-34,82;UBERON:0007284,9.15e-34,82;UBERON:0002346,6.68e-32,86;UBERON:0007023,8.60e-27,114;UBERON:0000200,2.29e-26,6;UBERON:0010314,2.60e-25,132;UBERON:0010371,2.82e-25,104;UBERON:0001871,1.96e-21,6;UBERON:0000349,8.29e-21,5;UBERON:0004121,1.15e-17,171;UBERON:0000924,1.15e-17,171;UBERON:0006601,1.15e-17,171;UBERON:0001872,1.87e-14,5;UBERON:0002021,1.87e-14,5;UBERON:0001870,4.28e-14,3;UBERON:0011216,7.16e-13,223;UBERON:0000025,7.81e-13,192;UBERON:0002420,1.82e-11,9;UBERON:0007245,1.82e-11,9;UBERON:0010009,1.82e-11,9;UBERON:0010011,1.82e-11,9;UBERON:0000454,1.82e-11,9;UBERON:0000369,4.78e-10,4;UBERON:0002435,4.78e-10,4;UBERON:0000204,4.78e-10,4;UBERON:0010082,4.78e-10,4;UBERON:0002771,7.90e-10,2;UBERON:0002702,8.25e-10,2;UBERON:0001876,2.52e-09,2;UBERON:0001954,4.17e-09,2;UBERON:0003022,4.17e-09,2;UBERON:0002421,4.17e-09,2;UBERON:0002600,4.17e-09,2;UBERON:0004111,6.29e-09,240;UBERON:0000483,1.54e-07,306;UBERON:0000125,1.62e-07,9;UBERON:0002308,1.62e-07,9;UBERON:0000119,2.14e-07,309 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61560529038394,0,0.313454721478088,0,0.273748850145768,0,0,0.0821005894499457,0,0,0,0,0,0,0,0.154934401160603,6.82412315939623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,1.57174890597255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.933633106199299,0.134710672069688,0,0.454072282934794,1.15235184896,0,0,0,0,0.117434498643765,0.809364721840658,1.26405726032024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896681151948218,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.767518373630648,0.964856007391714,7.41199689591088,0.290033387828457,1.61930592090592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.95318118213038,1.96937182974718,0,4.77931235257603,0,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0,0,0,0,7.75466196876175,8.07082454008106,0,0,0,0,0,0,0,0,0,0,0.885741385813839,1.92954301800653,0,0,0,4.38770794307945,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.343450790628,7.16670845889717,9.18913155648007,0.269604531922708,0,2.57690890297873,0,0,0,0,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0,0,0,0,0,0,0,0,0,0,17.0939149080872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,17.27335974142,2.38568906942791,2.58786471611994,0,0,0,0.2249738915515,0,12.271410444921,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.517131825446202,1.58679122091228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4049545195378,9.88412745705902,7.76183770380299,0.573409195690071,0.665574309221114,1.1177352529449,0,0,0,0,0,0,0.144921028610825,0.149254802886874,0,1.66441758450784,0,0,0,0,1.81477108515887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.57202304140731,0,0,0,0,0,0,21.7986261481874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.175885166784,22.6714522120936,6.8642559394575,8.40977093387096,0.252071696221718,12.9324062108087,7.75083099032885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5881182775732,6.24862478891078,8.68084545304973,15.3466260669255,0.546974809018219,0,0,0,0,0,0.672567444437648,0.606965604236632,0.91064876540519,0,0.230467975111559,0,7.34073116149782,16.8378300320894,0,0,0,4.87058328739606,0,0,0.215927591218621,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0.297046400327086,0.4226557275834,0,0,0.0644578879735772,0.499705779624645,0,0,0,0,0,0.143339583151451,0,14.346204430283,0.436350690340377,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0.267964130156178,0,0.103432995861895,0,0,0.129177819672012,0.620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,8.97591778449052 | |||
|short_description=p5@NRXN3 | |||
}} |
Revision as of 21:15, 11 January 2014
Short description: | p5@NRXN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NRXN3_5end |
Coexpression cluster: | C2316_mycosis_occipital_frontal_parietal_paracentral_postcentral_medial |
Association with transcript: | 0bp_to_ENST00000553631, ENST00000554719, NM_004796, uc001xun.2_5end |
EntrezGene: | NRXN3 |
HGNC: | 8010 |
UniProt: | G3V4R9Q9HDB5Q9Y4C0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.47e-07 | 10 |