FFCP PHASE1:Hg19::chr15:75871300..75871319,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5780 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9661 | |||
|TSSclassifier=weak | |||
|UniProt=P43378 | |||
|association_with_transcript=305bp_to_NM_002833,uc002bal.2_5end | |||
|description=CAGE_peak_3_at_PTPN9_5end | |||
|id=chr15:75871300..75871319,- | |||
|ontology_enrichment_celltype=CL:0000557!5.90e-31!71;CL:0002009!8.51e-28!65;CL:0000839!6.34e-27!70;CL:0002194!1.83e-26!63;CL:0000576!1.83e-26!63;CL:0000040!1.83e-26!63;CL:0000559!1.83e-26!63;CL:0002057!4.23e-25!42;CL:0002031!8.41e-25!124;CL:0000766!9.74e-25!76;CL:0000738!4.45e-24!140;CL:0002087!3.09e-23!119;CL:0000860!5.00e-23!45;CL:0000037!2.15e-18!172;CL:0000566!2.15e-18!172;CL:0002032!2.42e-17!165;CL:0000837!2.42e-17!165;CL:0000763!5.90e-17!112;CL:0000049!5.90e-17!112;CL:0000988!2.17e-16!182;CL:0002139!6.71e-11!24;CL:0000115!2.49e-10!35;CL:0000071!1.97e-09!18;CL:0002546!1.97e-09!18;CL:0000213!1.09e-08!57;CL:0000215!1.09e-08!57;CL:0002078!3.39e-08!44 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.73e-24;33!CL:0002057;7.73e-24;33!CL:0000576;3.32e-23;48!CL:0000473;2.48e-21;39!CL:0000234;2.48e-21;39!CL:0000766;2.76e-17;69!CL:0002139;4.96e-13;24!CL:0000115;5.18e-11;36!CL:0000071;5.65e-11;18!CL:0002087;1.56e-08;104!CL:0000763;4.68e-08;100!CL:0000738;7.42e-08;136!CL:0002078;6.32e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,8.57e-44,67;CL:0002009,2.07e-40,61;CL:0000839,7.07e-39,66;CL:0002194,1.57e-38,59;CL:0000576,1.57e-38,59;CL:0000040,1.57e-38,59;CL:0000559,1.57e-38,59;CL:0000766,5.89e-38,72;CL:0000473,1.80e-35,48;CL:0000234,1.80e-35,48;CL:0000860,1.92e-33,42;CL:0002057,1.92e-33,42;CL:0000738,9.39e-31,136;CL:0002031,3.56e-30,120;CL:0002087,2.50e-28,115;CL:0000763,2.23e-25,108;CL:0000049,2.23e-25,108;CL:0000037,3.07e-23,168;CL:0002032,4.63e-22,161;CL:0000837,4.63e-22,161;CL:0000988,3.51e-21,177;CL:0002139,1.05e-13,24;CL:0000115,1.08e-13,36;CL:0000071,1.19e-11,18;CL:0002546,1.19e-11,18;CL:0002078,1.53e-09,45;CL:0000213,9.04e-09,58;CL:0000215,9.04e-09,58;CL:0002393,1.26e-08,9;CL:0002397,1.26e-08,9;CL:0000134,9.10e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;6.44e-24;42!CL:0002546;5.65e-11;18!CL:0000049;1.57e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.44e-27!80;UBERON:0002390!3.47e-27!102;UBERON:0003061!3.47e-27!102;UBERON:0002193!3.97e-27!112;UBERON:0003081!1.15e-25!216;UBERON:0001474!1.35e-23!86;UBERON:0002405!3.55e-20!115;UBERON:0004765!4.20e-19!101;UBERON:0001434!4.20e-19!101;UBERON:0002204!3.33e-12!167;UBERON:0001986!1.97e-09!18;UBERON:0004638!1.97e-09!18;UBERON:0004852!1.97e-09!18;UBERON:0000055!3.93e-07!69;UBERON:0001981!5.31e-07!60;UBERON:0007500!5.31e-07!60;UBERON:0004537!5.31e-07!60;UBERON:0006965!5.31e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.65e-11;18!UBERON:0001986;5.65e-11;18!UBERON:0004852;5.65e-11;18!UBERON:0000487;1.04e-08;22!UBERON:0006914;1.08e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,7.99e-39,93;UBERON:0002193,5.60e-38,108;UBERON:0002371,1.18e-37,76;UBERON:0002390,3.20e-37,98;UBERON:0003061,3.20e-37,98;UBERON:0003081,1.06e-36,203;UBERON:0001474,3.89e-34,82;UBERON:0004765,2.28e-29,90;UBERON:0001434,1.64e-24,100;UBERON:0000926,3.82e-17,315;UBERON:0004120,3.82e-17,315;UBERON:0006603,3.82e-17,315;UBERON:0002204,4.28e-14,167;UBERON:0004638,1.19e-11,18;UBERON:0001986,1.19e-11,18;UBERON:0004852,1.19e-11,18;UBERON:0000487,2.21e-09,22;UBERON:0006914,2.10e-08,25;UBERON:0000055,3.24e-08,68;UBERON:0007500,2.14e-07,59;UBERON:0001981,2.14e-07,59;UBERON:0004537,2.14e-07,59;UBERON:0006965,2.14e-07,59;UBERON:0004872,6.87e-07,83 | |||
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| |||
|short_description=p3@PTPN9 | |||
}} |
Revision as of 00:37, 12 January 2014
Short description: | p3@PTPN9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PTPN9_5end |
Coexpression cluster: | NA |
Association with transcript: | 305bp_to_NM_002833, uc002bal.2_5end |
EntrezGene: | PTPN9 |
HGNC: | 9661 |
UniProt: | P43378 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immune system | 7.99e-39 | 93 |
hemolymphoid system | 5.60e-38 | 108 |
bone marrow | 1.18e-37 | 76 |
hematopoietic system | 3.20e-37 | 98 |
blood island | 3.20e-37 | 98 |
lateral plate mesoderm | 1.06e-36 | 203 |
bone element | 3.89e-34 | 82 |
skeletal element | 2.28e-29 | 90 |
skeletal system | 1.64e-24 | 100 |
mesoderm | 3.82e-17 | 315 |
mesoderm-derived structure | 3.82e-17 | 315 |
presumptive mesoderm | 3.82e-17 | 315 |
musculoskeletal system | 4.28e-14 | 167 |
blood vessel endothelium | 1.19e-11 | 18 |
endothelium | 1.19e-11 | 18 |
cardiovascular system endothelium | 1.19e-11 | 18 |
simple squamous epithelium | 2.21e-09 | 22 |
squamous epithelium | 2.10e-08 | 25 |
vessel | 3.24e-08 | 68 |
epithelial tube open at both ends | 2.14e-07 | 59 |
blood vessel | 2.14e-07 | 59 |
blood vasculature | 2.14e-07 | 59 |
vascular cord | 2.14e-07 | 59 |
splanchnic layer of lateral plate mesoderm | 6.87e-07 | 83 |