FFCP PHASE1:Hg19::chr17:42983574..42983593,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2670 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4235 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=277bp_to_U92979_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_15_at_GFAP_5end | |||
|id=chr17:42983574..42983593,- | |||
|ontology_enrichment_celltype=CL:0002605!1.04e-10!3;CL:0000128!1.38e-07!7;CL:0000126!1.38e-07!7;CL:0000127!1.38e-07!7;CL:0002453!1.38e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002605;1.97e-16;3!CL:0000128;2.63e-07;7!CL:0000126;2.63e-07;7!CL:0000127;2.63e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.97e-16,3;CL:0000128,2.64e-07,7;CL:0000126,2.64e-07,7;CL:0000127,2.64e-07,7;CL:0002453,2.64e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.61e-17;3!UBERON:0003057;2.61e-17;3!UBERON:0006601;6.70e-15;82!UBERON:0010122;2.06e-11;2!UBERON:0006215;1.17e-07;3!UBERON:0005425;6.23e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.66e-121!57;UBERON:0005068!5.66e-121!57;UBERON:0006241!5.66e-121!57;UBERON:0007135!5.66e-121!57;UBERON:0001017!9.31e-115!82;UBERON:0005743!5.94e-109!86;UBERON:0000073!1.13e-101!94;UBERON:0001016!1.13e-101!94;UBERON:0002616!6.67e-101!59;UBERON:0000955!5.99e-96!69;UBERON:0006238!5.99e-96!69;UBERON:0002780!9.13e-88!41;UBERON:0001890!9.13e-88!41;UBERON:0006240!9.13e-88!41;UBERON:0003080!1.69e-85!42;UBERON:0002020!2.47e-84!34;UBERON:0003528!2.47e-84!34;UBERON:0001893!1.34e-83!34;UBERON:0003075!2.42e-83!86;UBERON:0007284!2.42e-83!86;UBERON:0002791!5.58e-81!33;UBERON:0002346!3.88e-79!90;UBERON:0001869!2.29e-77!32;UBERON:0000956!1.72e-57!25;UBERON:0000203!1.72e-57!25;UBERON:0003056!2.57e-56!61;UBERON:0007023!9.79e-55!115;UBERON:0000033!1.10e-51!123;UBERON:0004121!1.27e-51!169;UBERON:0000924!3.76e-50!173;UBERON:0006601!3.76e-50!173;UBERON:0000153!9.31e-49!129;UBERON:0007811!9.31e-49!129;UBERON:0002619!1.53e-48!22;UBERON:0001950!8.28e-43!20;UBERON:0003076!1.49e-34!15;UBERON:0003057!1.49e-34!15;UBERON:0000025!6.97e-29!194;UBERON:0004732!2.09e-28!13;UBERON:0002308!5.52e-28!9;UBERON:0000125!5.52e-28!9;UBERON:0002420!2.13e-27!9;UBERON:0007245!2.13e-27!9;UBERON:0010009!2.13e-27!9;UBERON:0010011!2.13e-27!9;UBERON:0000454!2.13e-27!9;UBERON:0004733!2.49e-25!12;UBERON:0002028!2.49e-25!12;UBERON:0007277!2.49e-25!12;UBERON:0009663!9.69e-22!7;UBERON:0004111!6.42e-21!241;UBERON:0002298!4.03e-20!8;UBERON:0001871!3.65e-18!7;UBERON:0000477!9.77e-17!286;UBERON:0002680!1.89e-16!9;UBERON:0001895!1.89e-16!9;UBERON:0010092!1.89e-16!9;UBERON:0000349!1.04e-15!5;UBERON:0000483!2.06e-15!309;UBERON:0000119!3.79e-15!312;UBERON:0001872!5.24e-15!5;UBERON:0000064!7.54e-15!219;UBERON:0000475!8.55e-13!365;UBERON:0000200!9.94e-13!6;UBERON:0000369!1.44e-12!4;UBERON:0002435!1.44e-12!4;UBERON:0000204!1.44e-12!4;UBERON:0010082!1.44e-12!4;UBERON:0002240!3.11e-11!3;UBERON:0001896!4.05e-11!3;UBERON:0005290!4.05e-11!3;UBERON:0010096!4.05e-11!3;UBERON:0006331!4.33e-11!3;UBERON:0000988!1.15e-10!3;UBERON:0002021!2.16e-10!5;UBERON:0002771!3.08e-10!3;UBERON:0005383!5.07e-10!3;UBERON:0005382!5.07e-10!3;UBERON:0002037!2.30e-08!6;UBERON:0006215!2.30e-08!6;UBERON:0002148!5.85e-08!2;UBERON:0009662!5.85e-08!2;UBERON:0005162!7.38e-08!2;UBERON:0000122!7.38e-08!2;UBERON:0001875!8.69e-08!2;UBERON:0006514!8.69e-08!2;UBERON:0000062!9.65e-08!511;UBERON:0001873!1.28e-07!2;UBERON:0010122!1.28e-07!2;UBERON:0001954!1.72e-07!2;UBERON:0003022!1.72e-07!2;UBERON:0002421!1.72e-07!2;UBERON:0002600!1.72e-07!2;UBERON:0001897!2.22e-07!2;UBERON:0001894!2.31e-07!7;UBERON:0006222!2.31e-07!7;UBERON:0001876!2.36e-07!2;UBERON:0000922!7.15e-07!612;UBERON:0005174!7.30e-07!5;UBERON:0001137!7.30e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.34e-48;34!UBERON:0002020;2.34e-48;34!UBERON:0001893;3.25e-47;34!UBERON:0002791;3.88e-47;32!UBERON:0000073;2.30e-46;53!UBERON:0002616;2.30e-46;53!UBERON:0001869;1.29e-43;32!UBERON:0002780;5.66e-43;41!UBERON:0001890;5.66e-43;41!UBERON:0000956;1.59e-35;25!UBERON:0000203;1.59e-35;25!UBERON:0000955;2.82e-34;68!UBERON:0002298;1.11e-31;6!UBERON:0004732;1.57e-31;13!UBERON:0001017;2.24e-31;75!UBERON:0000125;3.12e-28;9!UBERON:0002308;3.12e-28;9!UBERON:0004733;6.24e-27;12!UBERON:0002028;6.24e-27;12!UBERON:0001016;3.09e-26;83!UBERON:0002619;1.36e-24;22!UBERON:0002420;1.34e-20;9!UBERON:0007245;1.34e-20;9!UBERON:0010009;1.34e-20;9!UBERON:0010011;1.34e-20;9!UBERON:0000454;1.34e-20;9!UBERON:0009663;8.40e-19;7!UBERON:0001950;4.31e-18;20!UBERON:0002240;2.61e-17;3!UBERON:0005174;2.61e-17;3!UBERON:0001137;2.61e-17;3!UBERON:0001896;5.12e-17;3!UBERON:0005290;5.12e-17;3!UBERON:0000988;1.87e-16;3!UBERON:0002680;3.16e-14;9!UBERON:0001895;3.16e-14;9!UBERON:0007023;4.38e-13;114!UBERON:0002148;6.40e-12;2!UBERON:0006331;6.40e-12;2!UBERON:0009662;6.40e-12;2!UBERON:0005162;9.56e-12;2!UBERON:0000122;9.56e-12;2!UBERON:0001875;1.28e-11;2!UBERON:0006514;1.28e-11;2!UBERON:0001873;2.06e-11;2!UBERON:0001954;3.20e-11;2!UBERON:0003022;3.20e-11;2!UBERON:0002421;3.20e-11;2!UBERON:0002600;3.20e-11;2!UBERON:0002771;4.60e-11;2!UBERON:0011216;5.49e-11;132!UBERON:0002021;5.87e-10;5!UBERON:0000349;8.35e-10;5!UBERON:0000200;3.60e-08;6!UBERON:0005383;6.89e-08;3!UBERON:0005382;6.89e-08;3!UBERON:0001871;4.60e-07;6!UBERON:0000941;6.23e-07;1!UBERON:0001785;6.23e-07;1!UBERON:0002464;6.23e-07;1!UBERON:0004904;6.23e-07;1!UBERON:0001021;6.23e-07;1!UBERON:0002038;7.77e-07;1!UBERON:0009661;7.77e-07;1!UBERON:0002950;7.77e-07;1!UBERON:0001891;7.77e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.23e-93,56;UBERON:0005068,5.23e-93,56;UBERON:0006241,5.23e-93,56;UBERON:0007135,5.23e-93,56;UBERON:0000073,4.66e-80,53;UBERON:0002616,4.66e-80,53;UBERON:0001017,9.65e-79,81;UBERON:0001016,9.38e-75,89;UBERON:0000955,8.57e-74,68;UBERON:0006238,8.57e-74,68;UBERON:0003075,3.88e-66,82;UBERON:0007284,3.88e-66,82;UBERON:0002346,8.54e-63,86;UBERON:0003528,2.17e-60,34;UBERON:0002020,2.17e-60,34;UBERON:0002780,2.31e-54,41;UBERON:0001890,2.31e-54,41;UBERON:0003080,2.31e-54,41;UBERON:0006240,2.31e-54,41;UBERON:0001893,3.06e-54,34;UBERON:0002791,6.25e-52,32;UBERON:0010371,6.70e-51,104;UBERON:0001869,2.97e-46,32;UBERON:0010314,2.27e-41,132;UBERON:0003076,6.84e-41,15;UBERON:0003057,6.84e-41,15;UBERON:0007023,3.56e-40,114;UBERON:0003056,6.22e-39,61;UBERON:0004121,2.52e-36,171;UBERON:0000924,2.52e-36,171;UBERON:0006601,2.52e-36,171;UBERON:0000956,2.30e-35,25;UBERON:0000203,2.30e-35,25;UBERON:0002298,1.14e-31,6;UBERON:0004732,1.63e-31,13;UBERON:0000125,2.77e-28,9;UBERON:0002308,2.77e-28,9;UBERON:0011216,6.00e-28,223;UBERON:0004733,6.47e-27,12;UBERON:0002028,6.47e-27,12;UBERON:0007277,6.47e-27,12;UBERON:0002619,1.87e-24,22;UBERON:0000025,7.80e-23,192;UBERON:0002420,1.15e-20,9;UBERON:0007245,1.15e-20,9;UBERON:0010009,1.15e-20,9;UBERON:0010011,1.15e-20,9;UBERON:0000454,1.15e-20,9;UBERON:0009663,8.11e-19,7;UBERON:0001950,5.68e-18,20;UBERON:0002240,2.76e-17,3;UBERON:0005174,2.76e-17,3;UBERON:0001137,2.76e-17,3;UBERON:0001896,4.25e-17,3;UBERON:0005290,4.25e-17,3;UBERON:0010096,4.25e-17,3;UBERON:0004111,5.99e-17,240;UBERON:0000988,2.31e-16,3;UBERON:0002680,3.59e-14,9;UBERON:0001895,3.59e-14,9;UBERON:0010092,3.59e-14,9;UBERON:0000483,6.01e-13,306;UBERON:0000119,9.36e-13,309;UBERON:0002148,5.75e-12,2;UBERON:0006331,5.75e-12,2;UBERON:0009662,5.75e-12,2;UBERON:0005162,8.37e-12,2;UBERON:0000122,8.37e-12,2;UBERON:0001875,1.09e-11,2;UBERON:0006514,1.09e-11,2;UBERON:0001873,2.06e-11,2;UBERON:0010122,2.06e-11,2;UBERON:0001954,3.29e-11,2;UBERON:0003022,3.29e-11,2;UBERON:0002421,3.29e-11,2;UBERON:0002600,3.29e-11,2;UBERON:0002771,6.10e-11,2;UBERON:0002021,6.96e-10,5;UBERON:0000349,7.62e-10,5;UBERON:0000200,4.40e-08,6;UBERON:0005383,6.89e-08,3;UBERON:0005382,6.89e-08,3;UBERON:0001871,4.80e-07,6;UBERON:0000941,6.23e-07,1;UBERON:0001785,6.23e-07,1;UBERON:0002464,6.23e-07,1;UBERON:0004904,6.23e-07,1;UBERON:0001021,6.23e-07,1;UBERON:0003902,6.23e-07,1;UBERON:0005425,6.23e-07,1;UBERON:0000923,6.77e-07,560;UBERON:0010316,6.77e-07,560;UBERON:0005291,6.77e-07,560;UBERON:0006598,6.77e-07,560;UBERON:0010317,6.77e-07,560;UBERON:0002532,6.77e-07,560;UBERON:0002050,8.56e-07,564;UBERON:0002038,8.67e-07,1;UBERON:0009661,8.67e-07,1;UBERON:0002950,8.67e-07,1;UBERON:0001891,8.67e-07,1;UBERON:0009616,8.67e-07,1;UBERON:0010286,8.67e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626909442956176,6.5834277040143,2.46373965131192,2.76193807108566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,0,0.773288812777695,0.502548796003046,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,2.95405774462077,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,1.76259386507517,1.99613798001194,0,0,0,0,0,0,0,0,0,6.20018970069687,1.5677537021303,1.52581736317083,0.552896299656123,2.65992857058193,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89824871816911,0,2.57690890297873,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60252173225874,3.28572909340783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,3.13267834056624,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.85199668716218,5.81823447667836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3184990331373,2.3786276834235,8.027728739661,6.87760119528484,3.47739856471747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52084279766904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578063025868136,1.41696576325585,3.19267718114303,5.74325819874114,0,0.414943514785307,1.61475645631851,11.4215536207324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,1.56215619722769,1.44680757550829,0.760989722326882,0.546974809018219,0,0,0,0,0,0,0.606965604236632,0,0,0,0,1.01954599465248,0.657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.2936027705405,5.64388160621463,16.0609176481692,0,0,0,0,0,0,0,0,0,6.16360207551241,0,0.611923411718232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,3.20642287171875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p15@GFAP | |||
}} |
Revision as of 15:43, 20 January 2014
Short description: | p15@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_GFAP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 277bp_to_U92979_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.97e-16 | 3 |
oligodendrocyte | 2.64e-07 | 7 |
macroglial cell | 2.64e-07 | 7 |
astrocyte | 2.64e-07 | 7 |
oligodendrocyte precursor cell | 2.64e-07 | 7 |