FFCP PHASE1:Hg19::chr18:34273182..34273194,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80206 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26178 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=243bp_to_uc010dna.1_5end | |||
|description=CAGE_peak_6_at_FHOD3_5end | |||
|id=chr18:34273182..34273194,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.01e-17!180;CL:0002620!1.05e-15!23;CL:0000057!2.40e-15!75;CL:0002556!4.06e-11!6 | |||
|ontology_enrichment_celltype_v019=CL:0002556;1.13e-31;6!CL:0002620;3.09e-17;23!CL:0002552;3.69e-10;5!CL:0000057;1.01e-08;73!CL:0002601;6.41e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002556,2.68e-31,6;CL:0000057,6.19e-21,76;CL:0002620,2.99e-17,23;CL:0002552,2.54e-10,5;CL:0002601,8.03e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.39e-17;5!DOID:450;1.39e-17;5!DOID:66;1.39e-17;5!DOID:423;1.39e-17;5!DOID:0080000;1.39e-17;5!DOID:11722;1.39e-17;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,9.96e-18,5;DOID:450,9.96e-18,5;DOID:66,9.96e-18,5;DOID:423,9.96e-18,5;DOID:0080000,9.96e-18,5;DOID:11722,9.96e-18,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!2.28e-16!95;UBERON:0001758!4.06e-11!6;UBERON:0003672!4.06e-11!6;UBERON:0000475!5.79e-10!365;UBERON:0007023!6.01e-10!115;UBERON:0000075!7.34e-10!13;UBERON:0005944!7.34e-10!13;UBERON:0004288!7.34e-10!13;UBERON:0003089!7.34e-10!13;UBERON:0003129!1.48e-09!11;UBERON:0002097!2.31e-09!40;UBERON:0002199!1.07e-08!45;UBERON:0002416!1.07e-08!45;UBERON:0000914!1.66e-08!83;UBERON:0002329!1.66e-08!83;UBERON:0003077!1.66e-08!83;UBERON:0003059!1.66e-08!83;UBERON:0007282!1.66e-08!83;UBERON:0009618!1.66e-08!83;UBERON:0007285!1.66e-08!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0001758;1.13e-31;6!UBERON:0003672;1.13e-31;6!UBERON:0003129;4.41e-27;7!UBERON:0011137;6.46e-23;11!UBERON:0010323;6.46e-23;11!UBERON:0000075;1.76e-15;16!UBERON:0000165;6.29e-14;28!UBERON:0002097;1.70e-09;41!UBERON:0006947;7.18e-08;3!UBERON:0004054;7.18e-08;3!UBERON:0001444;2.31e-07;48!UBERON:0003937;2.44e-07;12!UBERON:0005399;2.44e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001758,2.68e-31,6;UBERON:0003672,2.68e-31,6;UBERON:0003129,9.23e-27,7;UBERON:0003102,9.55e-26,99;UBERON:0010323,1.15e-22,11;UBERON:0011137,1.26e-17,14;UBERON:0000165,1.77e-16,29;UBERON:0000930,1.77e-16,29;UBERON:0000075,2.59e-15,16;UBERON:0002097,3.68e-11,41;UBERON:0002199,9.43e-10,46;UBERON:0002416,9.43e-10,46;UBERON:0001444,5.13e-09,49;UBERON:0000161,2.24e-08,36;UBERON:0006947,6.72e-08,3;UBERON:0004054,6.72e-08,3;UBERON:0000033,1.14e-07,56;UBERON:0003937,2.62e-07,12;UBERON:0005399,2.62e-07,12;UBERON:0000153,9.25e-07,62;UBERON:0007811,9.25e-07,62 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.866364470720326,0,0,0,1.46062018077475,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,1.80719576192283,0.50133791063589,0.724232594804119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0.937285727335186,0,0,0,0.469737994575059,0,0.561803226808994,1.42907919878425,2.21101771161182,0.309977343527296,0,1.97813543422845,0,0,3.03005005117319,1.00094815897571,1.38532057742091,3.5118209670467,1.22595118319608,1.50238058906597,0,3.22901344239952,0,1.27159140695737,2.40072876867522,1.95799805553034,1.28820270022815,0.558350568994769,2.19409231913646,0.194874010322397,1.51460264546469,0.828449087780694,0,0.710019185033229,1.10827308050404,0.67824236924195,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0.300343057843917,0.857479297891735,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0.473107245101804,0.117141414992713,0,0,0,0,0.184369168541703,1.04260337361699,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0.246381468041427,0,0,0,0,0,0,2.36718518408732,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0.62962469366128,0.6970372701606,0,0,0.869932992075073,0,0,0,0,0,0.255897791311334,0.42793898803392,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0.48763373908959,0,0,2.32049849393576,0.424216295861138,0,0,0,0,0,0.655894752046633,0,0,0,0.286822704408103,0.196498082026242,0,2.12856638442359,0.422215270595328,0,0.75894634753143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,1.97286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.307801034015188,0,0,0,0,0,1.19076871422421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.202203398942031,0,0,0,0,0,1.57833761139756,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,1.71986032471617,0,0,0,0.872901148395775,0,0.451961481561065,0,0,0.0633107959558787,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0.653174720218818,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,1.47284760201473,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,1.41070377476274,2.1437183414724,0.0642292250964595,0,0.159633859057151,0,0,0,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.19024743058172,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,1.01954599465248,0.131545547125698,0,0,1.41287567130925,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,1.27016115057279,0,0,0,0,0,0,0,0.102662806856247,0,0,0.233939463462106,0,0,0,0,0,0,0,0,2.94177986104687,0,0.196308467114945,0,0,0.679708458751268,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,1.11598505450025,0.924351257262837,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0.476128862927481,0,0,0,0.0636471582781649,0.202117188958219,0,0,0.0673520530145875,0.215166616178029,0.665320713092027,0,0,7.7228912914776,0,0,0.366724332548599,0.406896178315738,0.665756774185513,0,0 | |||
|short_description=p6@FHOD3 | |||
}} |
Revision as of 19:05, 20 January 2014
Short description: | p6@FHOD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FHOD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 243bp_to_uc010dna.1_5end |
EntrezGene: | FHOD3 |
HGNC: | 26178 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of periodontium | 2.68e-31 | 6 |
fibroblast | 6.19e-21 | 76 |
skin fibroblast | 2.99e-17 | 23 |
fibroblast of gingiva | 2.54e-10 | 5 |
uterine smooth muscle cell | 8.03e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
periodontium | 2.68e-31 | 6 |
dentition | 2.68e-31 | 6 |
skull | 9.23e-27 | 7 |
surface structure | 9.55e-26 | 99 |
cranial skeletal system | 1.15e-22 | 11 |
axial skeletal system | 1.26e-17 | 14 |
mouth | 1.77e-16 | 29 |
stomodeum | 1.77e-16 | 29 |
subdivision of skeletal system | 2.59e-15 | 16 |
skin of body | 3.68e-11 | 41 |
integument | 9.43e-10 | 46 |
integumental system | 9.43e-10 | 46 |
subdivision of head | 5.13e-09 | 49 |
orifice | 2.24e-08 | 36 |
male genital duct | 6.72e-08 | 3 |
internal male genitalia | 6.72e-08 | 3 |
head | 1.14e-07 | 56 |
sex gland | 2.62e-07 | 12 |
male reproductive gland | 2.62e-07 | 12 |
anterior region of body | 9.25e-07 | 62 |
craniocervical region | 9.25e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.96e-18 | 5 |
myotonic disease | 9.96e-18 | 5 |
muscle tissue disease | 9.96e-18 | 5 |
myopathy | 9.96e-18 | 5 |
muscular disease | 9.96e-18 | 5 |
myotonic dystrophy | 9.96e-18 | 5 |