FFCP PHASE1:Hg19::chr18:57571417..57571428,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:57571417..57571428,+ | |||
|id=chr18:57571417..57571428,+ | |||
|ontology_enrichment_celltype=CL:0000860!2.07e-18!45;CL:0002087!3.25e-18!119;CL:0000738!7.22e-17!140;CL:0002057!6.67e-16!42;CL:0000988!7.79e-16!182;CL:0002031!6.84e-15!124;CL:0000037!1.96e-14!172;CL:0000566!1.96e-14!172;CL:0002032!3.96e-14!165;CL:0000837!3.96e-14!165;CL:0002009!5.95e-12!65;CL:0002194!1.52e-11!63;CL:0000576!1.52e-11!63;CL:0000040!1.52e-11!63;CL:0000559!1.52e-11!63;CL:0000557!2.91e-10!71;CL:0000766!4.40e-10!76;CL:0000839!1.27e-09!70;CL:0000763!2.19e-08!112;CL:0000049!2.19e-08!112;CL:0002393!1.71e-07!9;CL:0002397!1.71e-07!9;CL:0000047!2.73e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.67e-20;33!CL:0002057;4.67e-20;33!CL:0000576;2.24e-14;48!CL:0000228;9.72e-14;1!CL:0002372;9.72e-14;1!CL:0000473;1.91e-13;39!CL:0000234;1.91e-13;39!CL:0000047;1.64e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.62e-23,42;CL:0002057,6.62e-23,42;CL:0000473,6.29e-20,48;CL:0000234,6.29e-20,48;CL:0002194,9.45e-16,59;CL:0000576,9.45e-16,59;CL:0000040,9.45e-16,59;CL:0000559,9.45e-16,59;CL:0002009,3.27e-15,61;CL:0000839,5.29e-14,66;CL:0000228,7.55e-14,1;CL:0002372,7.55e-14,1;CL:0000557,8.80e-14,67;CL:0000766,9.06e-13,72;CL:0002087,1.41e-11,115;CL:0002031,4.84e-11,120;CL:0000738,1.38e-09,136;CL:0000763,3.30e-08,108;CL:0000049,3.30e-08,108;CL:0002032,6.94e-08,161;CL:0000837,6.94e-08,161;CL:0000037,1.69e-07,168;CL:0000047,3.67e-07,8;CL:0000988,4.81e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;9.57e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.20e-08!102;UBERON:0003061!1.20e-08!102;UBERON:0002371!3.03e-08!80;UBERON:0001474!3.68e-07!86;UBERON:0002193!4.24e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.71e-12,76;UBERON:0001474,4.15e-11,82;UBERON:0004765,4.85e-10,90;UBERON:0002405,1.10e-09,93;UBERON:0002390,3.82e-09,98;UBERON:0003061,3.82e-09,98;UBERON:0001434,6.08e-09,100;UBERON:0002193,3.30e-08,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0.0821005894499457,0.0787107813136792,0,0.383829398097213,0.464448369948228,0,0,0,0,1.13735385989937,0,1.10799081706375,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0,0.309706370895104,0.575384784644301,0.256160706529101,0,0.344745680736619,0,0,0,0,0,1.22433556948361,0.320929027076094,0,0.329851300186716,0.199463657621632,0,1.7412554317715,1.70215567407342,0,1.00499466102697,1.0429658368404,0.434377689410233,3.02699751316684,1.10483290796269,4.1140110367315,0.211255286311942,0.212604299965044,0.209658645508376,0,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0.196709770113833,0.786021525498329,0.205601498999509,0,0.32592226663359,0,0,0,0.589211814949674,0.443067789167242,0,0.128091319725675,0,0,0.276350017785848,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,2.37600571456411,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0.243947412259191,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0.354920400119532,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,1.42636905040718,0,0,0,0,0,0,0.513372145118994,0.254094624222463,1.30139853857622,0,0,0.637938751653163,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.929015875628594,0.144269212976445,0.355709216742071,0,0,0,0.211673582723883,0.324621940274555,0,0,0,0,0.169291777801603,0,0,0,0.343505344755765,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0.329607748453519,0.422250816255987,0,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0.889563386041866,0.370691816839509,0.208843899010911,0,0,0,0,0,0,0,0,0,0,1.50323419414493,0.414752765588989,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0,0,0,0.19351266257817,0.219267951258557,0.0821154570532092,0,0,0,0.411125773940253,0,0,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,1.44677833618517,0.275078873194468,0.415440338029185,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33971858218986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0.57785949122191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0,0,0.39997479170986,0.106691729694141,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0.171488009437418,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0.935757853848423,0.198950775161368,0.118920090777569,0,0.219881033490858,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.126166424835079,0.218531143927391,0,0.203977659483963,0.26721740526556,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213454691755431,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr18:57571417..57571428,+ | |||
}} |
Revision as of 19:36, 20 January 2014
Short description: | p@chr18:57571417..57571428, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:57571417..57571428, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.62e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.62e-23 | 42 |
defensive cell | 6.29e-20 | 48 |
phagocyte | 6.29e-20 | 48 |
monopoietic cell | 9.45e-16 | 59 |
monocyte | 9.45e-16 | 59 |
monoblast | 9.45e-16 | 59 |
promonocyte | 9.45e-16 | 59 |
macrophage dendritic cell progenitor | 3.27e-15 | 61 |
myeloid lineage restricted progenitor cell | 5.29e-14 | 66 |
multinucleate cell | 7.55e-14 | 1 |
myotube | 7.55e-14 | 1 |
granulocyte monocyte progenitor cell | 8.80e-14 | 67 |
myeloid leukocyte | 9.06e-13 | 72 |
nongranular leukocyte | 1.41e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 4.84e-11 | 120 |
leukocyte | 1.38e-09 | 136 |
myeloid cell | 3.30e-08 | 108 |
common myeloid progenitor | 3.30e-08 | 108 |
hematopoietic oligopotent progenitor cell | 6.94e-08 | 161 |
hematopoietic multipotent progenitor cell | 6.94e-08 | 161 |
hematopoietic stem cell | 1.69e-07 | 168 |
neuronal stem cell | 3.67e-07 | 8 |
hematopoietic cell | 4.81e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.71e-12 | 76 |
bone element | 4.15e-11 | 82 |
skeletal element | 4.85e-10 | 90 |
immune system | 1.10e-09 | 93 |
hematopoietic system | 3.82e-09 | 98 |
blood island | 3.82e-09 | 98 |
skeletal system | 6.08e-09 | 100 |
hemolymphoid system | 3.30e-08 | 108 |