FFCP PHASE1:Hg19::chr1:19407933..19407948,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23352 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30313 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-133bp_to_ENST00000459947_5end | |||
|description=CAGE_peak_13_at_UBR4_5end | |||
|id=chr1:19407933..19407948,- | |||
|ontology_enrichment_celltype=CL:0002057!9.38e-28!42;CL:0000860!2.56e-25!45;CL:0002194!4.67e-25!63;CL:0000576!4.67e-25!63;CL:0000040!4.67e-25!63;CL:0000559!4.67e-25!63;CL:0002009!5.60e-24!65;CL:0000766!1.96e-23!76;CL:0000839!4.52e-23!70;CL:0000557!1.33e-22!71;CL:0000763!2.03e-16!112;CL:0000049!2.03e-16!112;CL:0002087!3.93e-11!119;CL:0002031!2.93e-10!124;CL:0000738!3.61e-10!140;CL:0002032!6.71e-09!165;CL:0000837!6.71e-09!165;CL:0000988!7.42e-09!182;CL:0000037!9.40e-09!172;CL:0000566!9.40e-09!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.60e-19;33!CL:0002057;1.60e-19;33!CL:0000840;1.46e-16;5!CL:0000473;8.63e-15;39!CL:0000234;8.63e-15;39!CL:0000576;3.32e-12;48!CL:0000990;3.09e-11;8!CL:0000451;2.74e-09;10!CL:0000738;6.43e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.67e-23,59;CL:0000576,2.67e-23,59;CL:0000040,2.67e-23,59;CL:0000559,2.67e-23,59;CL:0002009,1.71e-22,61;CL:0000839,1.09e-20,66;CL:0000557,2.32e-20,67;CL:0000766,7.53e-19,72;CL:0000860,7.60e-19,42;CL:0002057,7.60e-19,42;CL:0000840,1.12e-16,5;CL:0001029,1.12e-16,5;CL:0000473,2.36e-16,48;CL:0000234,2.36e-16,48;CL:0000763,4.77e-12,108;CL:0000049,4.77e-12,108;CL:0000990,2.60e-11,8;CL:0002087,3.26e-11,115;CL:0002031,1.12e-10,120;CL:0000451,2.38e-09,10;CL:0000738,3.21e-09,136;CL:0002032,1.62e-07,161;CL:0000837,1.62e-07,161;CL:0000037,3.95e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;2.44e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;4.13e-22;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.30e-22,2 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.99e-19!102;UBERON:0003061!2.99e-19!102;UBERON:0002371!6.41e-19!80;UBERON:0002193!1.22e-17!112;UBERON:0001474!6.63e-17!86;UBERON:0002405!1.23e-15!115;UBERON:0004765!7.10e-14!101;UBERON:0001434!7.10e-14!101;UBERON:0003081!3.42e-09!216;UBERON:0002204!2.94e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.81e-18,76;UBERON:0001474,2.26e-16,82;UBERON:0004765,8.85e-15,90;UBERON:0002405,2.98e-14,93;UBERON:0002390,1.92e-13,98;UBERON:0003061,1.92e-13,98;UBERON:0001434,3.84e-13,100;UBERON:0002193,4.77e-12,108;UBERON:0002204,3.49e-07,167 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767658796194425,0.154816123316076,0,0,0,0,0,0,0,0.401088894940283,0.434021741431704,0,0,0,2.03557534291391,0,0.727752183563449,1.62700325833979,0,0,0.575384784644301,1.0246428261164,0.709446689665756,0,0.645484683583826,0,1.88242339542605,1.09162460023138,1.12361742222542,0.306083892370903,0.641858054152187,0,1.31940520074686,0.997318288108159,0.426224750532694,0.580418477257168,0,0,1.00499466102697,1.0429658368404,0.868755378820466,0,0.368277635987565,0,0.211255286311942,0,0.209658645508376,0.898629049171961,0.600707571366025,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0.0654895377488563,0,0,2.92092654289215,2.96020553408754,1.46253756570752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,7.418952838636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,8.5670858706869,0,0,0.443430153536676,0,0,0.764637207142375,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0.270455678475983,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0.123084805461069,0,0,0.179021174675609,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0.23056390438806,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0.717873024576814,0,0.429226048136571,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,1.07572403599707,0,0,0,0.25426853765475,0,0,0,0,0,0.170388021785422,0.113312091520126,0.293104467356165,1.32506888912221,0,0,1.02652102730598,0,0,0.314408610199332,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530067437837643,0,0,0,0.690860683462397,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0.319267718114302,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,2.45375584038107,1.95068679971631,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,0,0,0,0,0.213233981900981,0,0,0.124149428591716,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p13@UBR4 | |||
}} |
Revision as of 16:42, 10 January 2014
Short description: | p13@UBR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_UBR4_5end |
Coexpression cluster: | NA |
Association with transcript: | -133bp_to_ENST00000459947_5end |
EntrezGene: | UBR4 |
HGNC: | 30313 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.67e-23 | 59 |
monocyte | 2.67e-23 | 59 |
monoblast | 2.67e-23 | 59 |
promonocyte | 2.67e-23 | 59 |
macrophage dendritic cell progenitor | 1.71e-22 | 61 |
myeloid lineage restricted progenitor cell | 1.09e-20 | 66 |
granulocyte monocyte progenitor cell | 2.32e-20 | 67 |
myeloid leukocyte | 7.53e-19 | 72 |
classical monocyte | 7.60e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.60e-19 | 42 |
immature conventional dendritic cell | 1.12e-16 | 5 |
common dendritic progenitor | 1.12e-16 | 5 |
defensive cell | 2.36e-16 | 48 |
phagocyte | 2.36e-16 | 48 |
myeloid cell | 4.77e-12 | 108 |
common myeloid progenitor | 4.77e-12 | 108 |
conventional dendritic cell | 2.60e-11 | 8 |
nongranular leukocyte | 3.26e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 1.12e-10 | 120 |
dendritic cell | 2.38e-09 | 10 |
leukocyte | 3.21e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.62e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.62e-07 | 161 |
hematopoietic stem cell | 3.95e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.81e-18 | 76 |
bone element | 2.26e-16 | 82 |
skeletal element | 8.85e-15 | 90 |
immune system | 2.98e-14 | 93 |
hematopoietic system | 1.92e-13 | 98 |
blood island | 1.92e-13 | 98 |
skeletal system | 3.84e-13 | 100 |
hemolymphoid system | 4.77e-12 | 108 |
musculoskeletal system | 3.49e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.30e-22 | 2 |