FFCP PHASE1:Hg19::chr21:30006488..30006499,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr21:30006488..30006499,+ | |||
|id=chr21:30006488..30006499,+ | |||
|ontology_enrichment_celltype=CL:0000359!1.66e-14!32;CL:0002543!1.92e-12!6;CL:0000222!1.22e-11!119;CL:0000192!2.75e-11!42;CL:0000514!2.75e-11!42;CL:0000220!7.18e-11!246;CL:0002321!1.12e-10!248;CL:0002368!1.73e-10!13;CL:0000680!3.57e-10!57;CL:0000056!3.57e-10!57;CL:0000355!3.57e-10!57;CL:0002202!4.65e-09!9;CL:0002632!4.65e-09!9;CL:0000187!9.18e-09!54;CL:0000055!2.55e-08!180;CL:0000071!2.60e-08!18;CL:0002546!2.60e-08!18;CL:0000144!5.90e-08!625;CL:0000068!6.68e-08!3;CL:0000069!6.68e-08!3;CL:0000307!6.68e-08!3;CL:0000377!6.68e-08!3;CL:0002328!7.47e-08!3;CL:0000183!1.23e-07!59;CL:0002371!1.66e-07!591;CL:0000393!1.96e-07!60;CL:0000211!1.96e-07!60;CL:0002139!3.52e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0002596;1.08e-31;2!CL:0000307;1.86e-21;3!CL:1000306;2.01e-16;4!CL:0002547;2.01e-16;4!CL:0000359;4.63e-16;32!CL:0000192;4.24e-12;43!CL:0002368;3.09e-11;13!CL:0002589;6.17e-09;2!CL:0002202;8.74e-08;9!CL:0002632;8.74e-08;9!CL:0002539;5.11e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002596,1.87e-31,2;CL:0000068,2.17e-21,3;CL:0000069,2.17e-21,3;CL:0000307,2.17e-21,3;CL:0000377,2.17e-21,3;CL:0000359,5.95e-17,32;CL:1000306,2.85e-16,4;CL:0002547,2.85e-16,4;CL:0000192,1.44e-12,43;CL:0000514,1.44e-12,43;CL:0002368,2.79e-11,13;CL:0000187,8.96e-10,55;CL:0000680,2.96e-09,58;CL:0000056,2.96e-09,58;CL:0000355,2.96e-09,58;CL:0002589,7.49e-09,2;CL:0000393,8.71e-09,61;CL:0000211,8.71e-09,61;CL:0002202,9.20e-08,9;CL:0002632,9.20e-08,9;CL:0000222,2.04e-07,121;CL:0002539,4.66e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000377;1.86e-21;3!CL:0000514;4.24e-12;43!CL:0000355;4.30e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001981!8.86e-24!60;UBERON:0007500!8.86e-24!60;UBERON:0004537!8.86e-24!60;UBERON:0006965!8.86e-24!60;UBERON:0001637!5.61e-23!42;UBERON:0003509!5.61e-23!42;UBERON:0004572!5.61e-23!42;UBERON:0000055!6.49e-23!69;UBERON:0004573!8.56e-21!33;UBERON:0004571!8.56e-21!33;UBERON:0002049!7.94e-19!79;UBERON:0007798!7.94e-19!79;UBERON:0004872!6.09e-17!84;UBERON:0004535!6.90e-13!110;UBERON:0001009!2.64e-12!113;UBERON:0000490!1.34e-10!138;UBERON:0003914!2.42e-10!118;UBERON:0000486!7.86e-10!82;UBERON:0000914!2.56e-09!83;UBERON:0002329!2.56e-09!83;UBERON:0003077!2.56e-09!83;UBERON:0003059!2.56e-09!83;UBERON:0007282!2.56e-09!83;UBERON:0009618!2.56e-09!83;UBERON:0007285!2.56e-09!83;UBERON:0000947!3.02e-09!21;UBERON:0010191!3.02e-09!21;UBERON:0001134!3.66e-09!61;UBERON:0002036!3.66e-09!61;UBERON:0003082!3.66e-09!61;UBERON:0002385!1.04e-08!63;UBERON:0001015!1.04e-08!63;UBERON:0000383!1.04e-08!63;UBERON:0001986!2.60e-08!18;UBERON:0004638!2.60e-08!18;UBERON:0004852!2.60e-08!18;UBERON:0001638!5.13e-08!9;UBERON:0003920!5.13e-08!9;UBERON:0004582!5.13e-08!9;UBERON:0004815!7.47e-08!3;UBERON:0002031!7.47e-08!3;UBERON:0004111!1.05e-07!241;UBERON:0004290!2.44e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.66e-32;33!UBERON:0004571;2.66e-32;33!UBERON:0005396;1.08e-31;2!UBERON:0001637;3.51e-23;42!UBERON:0003509;3.51e-23;42!UBERON:0004572;3.51e-23;42!UBERON:0000947;3.16e-18;21!UBERON:0010191;3.16e-18;21!UBERON:0004797;2.01e-16;4!UBERON:0000415;2.01e-16;4!UBERON:0007240;2.01e-16;4!UBERON:0005742;2.01e-16;4!UBERON:0005734;2.01e-16;4!UBERON:0004664;2.01e-16;4!UBERON:0004663;2.01e-16;4!UBERON:0007500;8.82e-13;56!UBERON:0001981;8.82e-13;56!UBERON:0004537;8.82e-13;56!UBERON:0000055;6.53e-10;65!UBERON:0003126;9.31e-10;7!UBERON:0001005;9.31e-10;7!UBERON:0001529;6.17e-09;2!UBERON:0007204;6.17e-09;2!UBERON:0002049;1.70e-08;75!UBERON:0007798;1.70e-08;75!UBERON:0003914;2.51e-08;74!UBERON:0004237;5.11e-07;10!UBERON:0004695;5.11e-07;10!UBERON:0002111;5.11e-07;10!UBERON:0004178;5.11e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,1.64e-36,33;UBERON:0004571,1.64e-36,33;UBERON:0005396,1.87e-31,2;UBERON:0001637,1.47e-28,42;UBERON:0003509,1.47e-28,42;UBERON:0004572,1.47e-28,42;UBERON:0007500,6.66e-25,59;UBERON:0001981,6.66e-25,59;UBERON:0004537,6.66e-25,59;UBERON:0006965,6.66e-25,59;UBERON:0000055,1.68e-21,68;UBERON:0002049,1.23e-18,78;UBERON:0007798,1.23e-18,78;UBERON:0000947,3.40e-18,21;UBERON:0010191,3.40e-18,21;UBERON:0004872,1.83e-17,83;UBERON:0000415,2.85e-16,4;UBERON:0007240,2.85e-16,4;UBERON:0005742,2.85e-16,4;UBERON:0005734,2.85e-16,4;UBERON:0004664,2.85e-16,4;UBERON:0004663,2.85e-16,4;UBERON:0004535,4.41e-13,109;UBERON:0001009,1.05e-12,112;UBERON:0003914,4.01e-12,117;UBERON:0003126,9.95e-10,7;UBERON:0001005,9.95e-10,7;UBERON:0004797,1.04e-09,7;UBERON:0001529,7.49e-09,2;UBERON:0007204,7.49e-09,2;UBERON:0001134,1.22e-08,62;UBERON:0002036,1.22e-08,62;UBERON:0003082,1.22e-08,62;UBERON:0002385,2.32e-08,64;UBERON:0001015,2.32e-08,64;UBERON:0000383,2.32e-08,64;UBERON:0002329,1.65e-07,71;UBERON:0003059,1.65e-07,71;UBERON:0007282,1.65e-07,71;UBERON:0004290,1.65e-07,71;UBERON:0009618,1.65e-07,71;UBERON:0003077,2.12e-07,72;UBERON:0007285,2.12e-07,72;UBERON:0007524,2.71e-07,73;UBERON:0004237,4.66e-07,10;UBERON:0004695,4.66e-07,10;UBERON:0002111,4.66e-07,10;UBERON:0004178,4.66e-07,10;UBERON:0000025,6.03e-07,192;UBERON:0007503,8.31e-07,78 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.90361775633475,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993812036833525,0,1.38856200643038,0,0,0,0.626984899610432,0,0,0,0,0,0,0,0,0.267899184852239,0.22452937262617,0.225222960966644,1.53316637465883,0.949265659568129,0.183201743930407,0,0,0,0,0.25326102332916,4.237093786023,1.14734648299525,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0.168336113954066,0,0,0,0,0.150238058906597,0.453728732640084,0.358779271377724,0.213557388818567,0,0.600182192168805,0.103052529238439,0.257640540045629,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0.508681776931463,0.386521706326594,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0.16798212819886,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0.532844358032199,0,0,0,0,0,0.791951872933429,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0.802025881213139,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0.495854746082934,0,1.91419068741876,0,0,0.62962469366128,1.3940745403212,1.54016790088044,0,0,0.74129687641568,1.28812398067792,0,0,0,0,0,1.27281299170375,3.13979456079692,0,0,0,0.404364963146632,1.58510321173008,0,0,0,0,0.136499911407986,0,0,0.551365343546124,0.66343897524122,0.438450885253763,0,0,0.405820753925408,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0.48111056362756,1.34060455107157,2.17781969722645,0,0,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34823682632161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0.738832686744051,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295710299979268,0.159296767163702,0,0.155262956876259,0.414706207840855,0.265841714557995,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr21:30006488..30006499,+ | |||
}} |
Revision as of 13:15, 21 January 2014
Short description: | p@chr21:30006488..30006499, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:30006488..30006499, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the carotid artery | 1.87e-31 | 2 |
duct epithelial cell | 2.17e-21 | 3 |
branched duct epithelial cell | 2.17e-21 | 3 |
tracheal epithelial cell | 2.17e-21 | 3 |
tracheoblast | 2.17e-21 | 3 |
vascular associated smooth muscle cell | 5.95e-17 | 32 |
fibroblast of tunica adventitia of artery | 2.85e-16 | 4 |
fibroblast of the aortic adventitia | 2.85e-16 | 4 |
smooth muscle cell | 1.44e-12 | 43 |
smooth muscle myoblast | 1.44e-12 | 43 |
respiratory epithelial cell | 2.79e-11 | 13 |
muscle cell | 8.96e-10 | 55 |
muscle precursor cell | 2.96e-09 | 58 |
myoblast | 2.96e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.96e-09 | 58 |
smooth muscle cell of the brachiocephalic vasculature | 7.49e-09 | 2 |
electrically responsive cell | 8.71e-09 | 61 |
electrically active cell | 8.71e-09 | 61 |
epithelial cell of tracheobronchial tree | 9.20e-08 | 9 |
epithelial cell of lower respiratory tract | 9.20e-08 | 9 |
mesodermal cell | 2.04e-07 | 121 |
aortic smooth muscle cell | 4.66e-07 | 10 |