FFCP PHASE1:Hg19::chr21:30672681..30672700,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=571 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=935 | |||
|TSSclassifier=weak | |||
|UniProt=C9JMP6 | |||
|association_with_transcript=-422bp_to_ENST00000447177_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_19_at_BACH1_5end | |||
|id=chr21:30672681..30672700,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.45e-71!42;CL:0000860!5.37e-66!45;CL:0002009!1.64e-46!65;CL:0000766!6.79e-45!76;CL:0000839!1.74e-44!70;CL:0000557!6.04e-44!71;CL:0002194!6.83e-43!63;CL:0000576!6.83e-43!63;CL:0000040!6.83e-43!63;CL:0000559!6.83e-43!63;CL:0000763!8.28e-42!112;CL:0000049!8.28e-42!112;CL:0000738!4.52e-32!140;CL:0000037!1.34e-29!172;CL:0000566!1.34e-29!172;CL:0002032!1.65e-27!165;CL:0000837!1.65e-27!165;CL:0000988!4.10e-27!182;CL:0002031!6.43e-27!124;CL:0002087!2.23e-25!119;CL:0000134!1.31e-11!358;CL:0002320!4.48e-11!365;CL:0000219!9.41e-10!390;CL:0000048!5.79e-08!430;CL:0000034!1.11e-07!444;CL:0000723!1.23e-07!436;CL:0000767!1.28e-07!3;CL:0000453!1.95e-07!5;CL:0000842!4.81e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.83e-113;33!CL:0002057;3.83e-113;33!CL:0000473;1.76e-78;39!CL:0000234;1.76e-78;39!CL:0000576;1.69e-62;48!CL:0000766;7.21e-44;69!CL:0000763;2.58e-18;100!CL:0002087;8.09e-17;104!CL:0000738;4.36e-11;136!CL:0002393;4.98e-10;6!CL:0002397;4.98e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.68e-121,42;CL:0002057,7.68e-121,42;CL:0000473,3.99e-105,48;CL:0000234,3.99e-105,48;CL:0002009,2.61e-86,61;CL:0002194,4.08e-83,59;CL:0000576,4.08e-83,59;CL:0000040,4.08e-83,59;CL:0000559,4.08e-83,59;CL:0000557,2.97e-78,67;CL:0000766,2.31e-77,72;CL:0000839,6.50e-74,66;CL:0000763,8.23e-54,108;CL:0000049,8.23e-54,108;CL:0000738,9.29e-42,136;CL:0002031,9.48e-42,120;CL:0002087,1.48e-40,115;CL:0002032,1.65e-34,161;CL:0000837,1.65e-34,161;CL:0000037,7.32e-33,168;CL:0000988,6.20e-31,177;CL:0000134,8.31e-13,354;CL:0002320,1.88e-12,361;CL:0000219,3.37e-11,386;CL:0000048,1.15e-09,427;CL:0000723,1.88e-09,433;CL:0000034,3.54e-09,441;CL:0002393,7.73e-07,9;CL:0002397,7.73e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.20e-87;42!CL:0000049;1.51e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.27e-39!102;UBERON:0003061!5.27e-39!102;UBERON:0002371!1.11e-37!80;UBERON:0002193!2.57e-34!112;UBERON:0001474!3.12e-34!86;UBERON:0004765!2.07e-27!101;UBERON:0001434!2.07e-27!101;UBERON:0002405!3.02e-25!115;UBERON:0003081!1.76e-15!216;UBERON:0002204!8.91e-14!167;UBERON:0002384!2.37e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.61e-68,76;UBERON:0001474,3.34e-63,82;UBERON:0004765,3.35e-57,90;UBERON:0002405,3.26e-55,93;UBERON:0002390,3.62e-52,98;UBERON:0003061,3.62e-52,98;UBERON:0001434,4.94e-51,100;UBERON:0002193,6.52e-47,108;UBERON:0002204,1.30e-28,167;UBERON:0003081,1.25e-22,203;UBERON:0000926,1.09e-12,315;UBERON:0004120,1.09e-12,315;UBERON:0006603,1.09e-12,315;UBERON:0002384,5.75e-12,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.383829398097213,0.464448369948228,0,0,0,0,0,0,4.43196326825502,2.80762226458198,3.47217393145363,0,0,0,1.89017710413434,1.13362783106643,0.970336244751265,1.39457422143411,2.87817521615278,2.16794459626573,5.17846306179871,5.12321413058201,4.02019790810595,5.5159308917859,3.22742341791913,2.70852973188684,0.941211697713023,0.818718450173537,0.449446968890169,3.36692281607993,2.24650318953266,3.83602275479425,4.61791820261403,4.78712778291916,2.13112375266347,3.77272010217159,7.37600792098482,5.60540024096017,3.76872997885115,2.60741459210101,3.04064382587163,3.63239701580021,6.2607198117886,6.0127853613768,0.211255286311942,0,0.419317291016752,0.112328631146495,0.450530678524519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65766205374414,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,4.6428117273477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0.337884881306145,0,0,0.303859956177382,0,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p19@BACH1 | |||
}} |
Revision as of 13:18, 21 January 2014
Short description: | p19@BACH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_BACH1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -422bp_to_ENST00000447177_5end |
EntrezGene: | BACH1 |
HGNC: | 935 |
UniProt: | C9JMP6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.68e-121 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.68e-121 | 42 |
defensive cell | 3.99e-105 | 48 |
phagocyte | 3.99e-105 | 48 |
macrophage dendritic cell progenitor | 2.61e-86 | 61 |
monopoietic cell | 4.08e-83 | 59 |
monocyte | 4.08e-83 | 59 |
monoblast | 4.08e-83 | 59 |
promonocyte | 4.08e-83 | 59 |
granulocyte monocyte progenitor cell | 2.97e-78 | 67 |
myeloid leukocyte | 2.31e-77 | 72 |
myeloid lineage restricted progenitor cell | 6.50e-74 | 66 |
myeloid cell | 8.23e-54 | 108 |
common myeloid progenitor | 8.23e-54 | 108 |
leukocyte | 9.29e-42 | 136 |
hematopoietic lineage restricted progenitor cell | 9.48e-42 | 120 |
nongranular leukocyte | 1.48e-40 | 115 |
hematopoietic oligopotent progenitor cell | 1.65e-34 | 161 |
hematopoietic multipotent progenitor cell | 1.65e-34 | 161 |
hematopoietic stem cell | 7.32e-33 | 168 |
hematopoietic cell | 6.20e-31 | 177 |
mesenchymal cell | 8.31e-13 | 354 |
connective tissue cell | 1.88e-12 | 361 |
motile cell | 3.37e-11 | 386 |
multi fate stem cell | 1.15e-09 | 427 |
somatic stem cell | 1.88e-09 | 433 |
stem cell | 3.54e-09 | 441 |
intermediate monocyte | 7.73e-07 | 9 |
CD14-positive, CD16-positive monocyte | 7.73e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.61e-68 | 76 |
bone element | 3.34e-63 | 82 |
skeletal element | 3.35e-57 | 90 |
immune system | 3.26e-55 | 93 |
hematopoietic system | 3.62e-52 | 98 |
blood island | 3.62e-52 | 98 |
skeletal system | 4.94e-51 | 100 |
hemolymphoid system | 6.52e-47 | 108 |
musculoskeletal system | 1.30e-28 | 167 |
lateral plate mesoderm | 1.25e-22 | 203 |
mesoderm | 1.09e-12 | 315 |
mesoderm-derived structure | 1.09e-12 | 315 |
presumptive mesoderm | 1.09e-12 | 315 |
connective tissue | 5.75e-12 | 371 |