FFCP PHASE1:Hg19::chr2:25383947..25383959,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C115 | |||
|description=CAGE_peak_at_chr2:25383947..25383959,+ | |||
|id=chr2:25383947..25383959,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;2.37e-29;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,4.20e-29,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.37e-29;1!UBERON:0003056;9.90e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003296!1.08e-09!4;UBERON:0010133!1.08e-09!4;UBERON:0000007!3.24e-09!2;UBERON:0001894!5.05e-09!7;UBERON:0006222!5.05e-09!7;UBERON:0003135!1.64e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;1.13e-57;2!UBERON:0003296;1.78e-29;4!UBERON:0010133;1.78e-29;4!UBERON:0000941;2.37e-29;1!UBERON:0001785;2.37e-29;1!UBERON:0002464;2.37e-29;1!UBERON:0004904;2.37e-29;1!UBERON:0001021;2.37e-29;1!UBERON:0001894;2.46e-17;7!UBERON:0003714;2.05e-15;2!UBERON:0005162;2.05e-15;2!UBERON:0000122;2.05e-15;2!UBERON:0000078;2.05e-15;2!UBERON:0002012;2.05e-15;2!UBERON:0008886;2.05e-15;2!UBERON:0002368;2.37e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.13e-57,2;UBERON:0000941,1.78e-29,1;UBERON:0001785,1.78e-29,1;UBERON:0002464,1.78e-29,1;UBERON:0004904,1.78e-29,1;UBERON:0001021,1.78e-29,1;UBERON:0003902,1.78e-29,1;UBERON:0005425,1.78e-29,1;UBERON:0003296,1.78e-29,4;UBERON:0010133,1.78e-29,4;UBERON:0001894,2.46e-17,7;UBERON:0006222,2.46e-17,7;UBERON:0003714,1.78e-15,2;UBERON:0005162,1.78e-15,2;UBERON:0000122,1.78e-15,2;UBERON:0000078,2.74e-15,2;UBERON:0007497,2.74e-15,2;UBERON:0003643,2.74e-15,2;UBERON:0003504,2.74e-15,2;UBERON:0003469,2.74e-15,2;UBERON:0003496,2.74e-15,2;UBERON:0002012,2.74e-15,2;UBERON:0008886,2.74e-15,2;UBERON:0007303,2.74e-15,2;UBERON:0002061,2.74e-15,2;UBERON:0005432,2.74e-15,2;UBERON:0004363,2.74e-15,2;UBERON:0004145,1.20e-10,3;UBERON:0001781,2.11e-08,4;UBERON:0002368,4.96e-08,35;UBERON:0003498,6.77e-07,5;UBERON:0005985,6.77e-07,5 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,6.67662164660295,10.2447986108084,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0.371995018166751,0,0,0,0,0,0,0,0,1.25353769646188,0.151557396436479,0.803892390468535,0,0.103432995861895,0.213233981900981,0,0,0,0,0,0.404234377916439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:25383947..25383959,+ | |||
}} |
Revision as of 02:07, 21 January 2014
Short description: | p@chr2:25383947..25383959, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:25383947..25383959, + |
Coexpression cluster: | C115_pituitary_Neural_caudate_putamen_amygdala_medulla_hippocampus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 4.20e-29 | 1 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.13e-57 | 2 |
cranial nerve II | 1.78e-29 | 1 |
cranial nerve | 1.78e-29 | 1 |
nerve trunk | 1.78e-29 | 1 |
nerve connecting eye with brain | 1.78e-29 | 1 |
nerve | 1.78e-29 | 1 |
retinal neural layer | 1.78e-29 | 1 |
presumptive neural retina | 1.78e-29 | 1 |
gland of diencephalon | 1.78e-29 | 4 |
neuroendocrine gland | 1.78e-29 | 4 |
diencephalon | 2.46e-17 | 7 |
future diencephalon | 2.46e-17 | 7 |
neural tissue | 1.78e-15 | 2 |
multi cell component structure | 1.78e-15 | 2 |
neuron projection bundle | 1.78e-15 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 2.74e-15 | 2 |
developing epithelial placode | 2.74e-15 | 2 |
respiratory system arterial blood vessel | 2.74e-15 | 2 |
respiratory system blood vessel | 2.74e-15 | 2 |
respiratory system artery | 2.74e-15 | 2 |
head blood vessel | 2.74e-15 | 2 |
pulmonary artery | 2.74e-15 | 2 |
pulmonary vascular system | 2.74e-15 | 2 |
pharyngeal vasculature | 2.74e-15 | 2 |
truncus arteriosus | 2.74e-15 | 2 |
aortic sac | 2.74e-15 | 2 |
pharyngeal arch artery | 2.74e-15 | 2 |
outflow tract | 1.20e-10 | 3 |
layer of retina | 2.11e-08 | 4 |
endocrine gland | 4.96e-08 | 35 |
heart blood vessel | 6.77e-07 | 5 |
coronary vessel | 6.77e-07 | 5 |