FFCP PHASE1:Hg19::chr2:70167296..70167306,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=4084 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6761 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=480bp_to_BC036402_5end | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_3_at_MXD1_5end | |||
|id=chr2:70167296..70167306,+ | |||
|ontology_enrichment_celltype=CL:0000766!3.52e-28!76;CL:0002057!3.87e-26!42;CL:0000860!6.29e-25!45;CL:0002009!9.42e-25!65;CL:0002194!9.17e-24!63;CL:0000576!9.17e-24!63;CL:0000040!9.17e-24!63;CL:0000559!9.17e-24!63;CL:0000839!1.01e-23!70;CL:0000557!3.20e-23!71;CL:0000738!1.61e-22!140;CL:0000763!1.81e-20!112;CL:0000049!1.81e-20!112;CL:0002031!1.03e-18!124;CL:0000037!2.27e-18!172;CL:0000566!2.27e-18!172;CL:0002087!7.65e-18!119;CL:0002032!1.70e-17!165;CL:0000837!1.70e-17!165;CL:0000988!2.17e-16!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.27e-30;33!CL:0002057;1.27e-30;33!CL:0000473;6.90e-29;39!CL:0000234;6.90e-29;39!CL:0000576;1.35e-24;48!CL:0000766;5.28e-19;69!CL:0000763;1.53e-09;100!CL:0000094;1.81e-09;8!CL:0002087;1.17e-08;104!CL:0000738;1.46e-07;136!CL:0000081;2.03e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.06e-45,48;CL:0000234,6.06e-45,48;CL:0000766,7.23e-45,72;CL:0002009,1.72e-43,61;CL:0002194,6.91e-42,59;CL:0000576,6.91e-42,59;CL:0000040,6.91e-42,59;CL:0000559,6.91e-42,59;CL:0000860,1.59e-40,42;CL:0002057,1.59e-40,42;CL:0000557,1.60e-37,67;CL:0000839,1.21e-36,66;CL:0000738,2.16e-31,136;CL:0000763,2.58e-29,108;CL:0000049,2.58e-29,108;CL:0002087,7.83e-28,115;CL:0002031,1.22e-26,120;CL:0000037,8.78e-25,168;CL:0002032,1.17e-23,161;CL:0000837,1.17e-23,161;CL:0000988,1.38e-22,177;CL:0000094,1.84e-09,8;CL:0002393,4.22e-08,9;CL:0002397,4.22e-08,9;CL:0000081,2.41e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;6.18e-29;42!CL:0000049;1.49e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.64e-26!102;UBERON:0003061!5.64e-26!102;UBERON:0002193!1.45e-24!112;UBERON:0002371!4.55e-20!80;UBERON:0001474!5.29e-18!86;UBERON:0002405!7.03e-18!115;UBERON:0004765!9.80e-13!101;UBERON:0001434!9.80e-13!101;UBERON:0000178!7.94e-07!15;UBERON:0000179!7.94e-07!15;UBERON:0000463!7.94e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.19e-08;15!UBERON:0000179;1.19e-08;15!UBERON:0000463;1.19e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.99e-40,98;UBERON:0003061,1.99e-40,98;UBERON:0002193,1.37e-38,108;UBERON:0002371,6.84e-34,76;UBERON:0001474,1.01e-30,82;UBERON:0002405,1.15e-30,93;UBERON:0004765,9.07e-27,90;UBERON:0001434,7.68e-22,100;UBERON:0003081,6.17e-10,203;UBERON:0000178,1.03e-08,15;UBERON:0000179,1.03e-08,15;UBERON:0000463,1.03e-08,15;UBERON:0002204,1.14e-07,167 | |||
|phase1_expression=0.54503513781167,0.856402095563933,0.704772020479856,0,0,0.872338524100369,0,0.631719873426831,0.261185628199839,0.491467873003018,0,0,0.527533956456907,0.247532705920093,0,0,0,0,2.43966399395253,0.123121058076788,0.204000691244253,0,0,0,0.125542639594803,0.229240217243854,0.0821005894499457,0.0787107813136792,13.7677496897116,4.98978217526377,8.3600706590681,1.83884244895785,0,2.9580320813343,0.309868802321207,0,2.64240395401362,10.5259127621057,9.02450013615638,5.20826089718044,3.35873211359887,1.29557466407592,2.57575567634187,14.2490274003973,6.80176698639857,5.82201746850759,24.1726198381912,11.9238687526329,10.2203102395384,43.7292436329669,20.7490172288572,10.6417003449863,42.7484644113407,16.1371170895957,18.9597081232078,32.377682401328,13.3724013528344,13.25868558226,104.680691190849,19.5766706516417,46.032273057531,18.8015241106428,17.7522655283252,13.2129672665135,45.8530597033163,10.7803192691317,18.0618452208717,31.9085804876064,27.1171117578505,8.03598725408932,23.6105806027014,12.5214396235772,23.1017542831846,1.90129757680748,2.55125159958052,2.30624510059213,5.27944566388527,9.6113211418564,1.92870704036496,2.28010194992999,2.98375015798635,2.92262646023414,0,0.546138611262131,1.77901850772711,1.70692089026603,0,0.574752439954483,2.64417949113945,0.954053754535364,0.569212969109448,2.93618594685469,0.764546456250458,2.64342657158052,1.68152568894461,2.63384084775077,0.393419540227666,2.35806457649499,1.23360899399706,0.668745981562712,0,0.946895611469467,0,0.557052284425868,0.883817722424512,0.443067789167242,1.08321545506006,2.5618263945135,3.12142434143708,3.61763390128087,4.14525026678773,0.289803085735052,0.296573126324121,0,0,2.26618685395132,0.383220493601921,0.34362744548263,0.253019692019503,3.18565414324097,0.651083453856419,0,0.451725357233318,0.383959833463255,0,1.18388626022008,0,2.21767417547206,0.802320587350522,1.88271725047639,0,0.670700859703636,0.511450247374121,0,0,0.869079113764942,0,0,0.189069634328136,0.221729397462564,0.527008714158756,0.458426764241994,0.364295288292542,1.11235332835329,0.97364218096405,4.00498395788315,2.39324328933957,3.10037811596945,1.71598473234038,0.371457501329565,0.198762407366705,0,0.694281003215189,0,0.838998872419812,0.275118041940067,0,0.516833518338658,0,0,0,0,0.24406205754817,0,0.81014194788176,0.267899184852239,0,0,0,0,0.183201743930407,31.6273001846552,127.967487168947,0.436094052142534,1.98788780678127,0,0.529636723252875,0.573673241497627,0.354668382198357,0,1.06748995729705,0,0.311211035399766,1.0776853765575,0.817309515567294,0.302714855289863,0,0,0.312160076830321,0,0.747243402759005,0.117434498643765,0.161872944368132,0,0.204154171254893,0.368502951935304,0,1.18800285728205,0,0,1.43723628363248,0,0,0,0.438977620880838,0.612975591598039,0,0.907457465280168,0,0.213557388818567,0,0,0,0,0.37223371266318,0.168776332241266,0.292311015483596,0.252433774244115,0.0920498986422993,0,0,0.503760491138201,0.169560592310488,1.54608682530637,1.63647672354501,0.860413786167011,0.121973706129595,0,0.348581828608555,0.10366105501537,0,0.36497735907583,0,0,0,0.928735856063958,0,0.709840800239063,0,0.241011029883482,0.220587945464788,1.08939722046203,0,0.539325232640658,0,1.15424147083917,0,0,0.8231480226628,0,1.26755034821831,0.982827216677626,0.590789906681404,0,0.614942192715568,0.514703430895577,0.98775256867763,0,0.804231779293047,0.0925884451585296,0,0,0,0.115930404975077,0.469634776943287,0.288732895522148,0.925971025153221,1.33177906564219,2.37061319387782,0.858486162094873,2.95460407304877,1.40402559083543,1.63494278517601,0,0.335964256397719,0.567100388969546,1.61205340865127,0.871901815541886,0.383382679165211,0.985326475791887,0.704387472105808,0.829312462163088,0.576479813667846,0.37872730027914,0.253991577168676,0,0,0,0,1.20137223137567,0.285826432630578,0.112131084345361,0.43596006883328,0.2933531432838,0.775630294546667,0,0.845302752556,0.531876233169741,1.04007436911366,0,0,0,1.00084595560703,1.08524321078289,0,0,1.77695974371273,0,1.80863626235752,1.74306691720059,0.499864955910285,4.86495122564762,7.5338563714819,16.8667151586425,0.718874566474748,0,0,0.144781306667579,0.205476322550383,0,1.12085143993527,1.18218456121156,2.37190332345469,1.92514554419623,0,0,0,0.502548796003046,1.27587750330633,25.4662388142042,98.7232815373282,9.53155680902882,0,1.00034104211935,0.271265023699736,1.45579603071565,0.535286966391485,1.41932173530541,0.468565659970853,0.300946099727719,0,0,0,0.184369168541703,0,0.391602314925481,0,0.82707210449155,6.90285442619574,1.81436848265855,0,0,0,0.496215615637554,0,0.280660094433074,0.384417447767103,1.02341449813341,0.482561763430822,0,0,0.355123450626254,0.328508624055237,0,0.232420756919918,0.120859449591622,1.60405176242628,3.22283461275637,0.34444334449382,0.910455840033585,0.393373244878272,0.451199612907412,0.462092022626489,0,0,0.105551628892876,0,0.680374821106063,0,0,0,0,0,0,0.447749509444357,0.877039506583738,2.3529190592241,0.769350375349168,0,0.976135183992909,1.85473820965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| |||
|short_description=p3@MXD1 | |||
}} |
Revision as of 03:44, 21 January 2014
Short description: | p3@MXD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_MXD1_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | 480bp_to_BC036402_5end |
EntrezGene: | MXD1 |
HGNC: | 6761 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.06e-45 | 48 |
phagocyte | 6.06e-45 | 48 |
myeloid leukocyte | 7.23e-45 | 72 |
macrophage dendritic cell progenitor | 1.72e-43 | 61 |
monopoietic cell | 6.91e-42 | 59 |
monocyte | 6.91e-42 | 59 |
monoblast | 6.91e-42 | 59 |
promonocyte | 6.91e-42 | 59 |
classical monocyte | 1.59e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.59e-40 | 42 |
granulocyte monocyte progenitor cell | 1.60e-37 | 67 |
myeloid lineage restricted progenitor cell | 1.21e-36 | 66 |
leukocyte | 2.16e-31 | 136 |
myeloid cell | 2.58e-29 | 108 |
common myeloid progenitor | 2.58e-29 | 108 |
nongranular leukocyte | 7.83e-28 | 115 |
hematopoietic lineage restricted progenitor cell | 1.22e-26 | 120 |
hematopoietic stem cell | 8.78e-25 | 168 |
hematopoietic oligopotent progenitor cell | 1.17e-23 | 161 |
hematopoietic multipotent progenitor cell | 1.17e-23 | 161 |
hematopoietic cell | 1.38e-22 | 177 |
granulocyte | 1.84e-09 | 8 |
intermediate monocyte | 4.22e-08 | 9 |
CD14-positive, CD16-positive monocyte | 4.22e-08 | 9 |
blood cell | 2.41e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.99e-40 | 98 |
blood island | 1.99e-40 | 98 |
hemolymphoid system | 1.37e-38 | 108 |
bone marrow | 6.84e-34 | 76 |
bone element | 1.01e-30 | 82 |
immune system | 1.15e-30 | 93 |
skeletal element | 9.07e-27 | 90 |
skeletal system | 7.68e-22 | 100 |
lateral plate mesoderm | 6.17e-10 | 203 |
blood | 1.03e-08 | 15 |
haemolymphatic fluid | 1.03e-08 | 15 |
organism substance | 1.03e-08 | 15 |
musculoskeletal system | 1.14e-07 | 167 |