FFCP PHASE1:Mm9::chr13:115892012..115892032,-: Difference between revisions
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{{FFCP|EntrezGene=109700|HGNC=|MCL_coexpression_id=409|UniProt=Q3URV2|association_with_transcript=106bp_to_ENSMUST00000036276_5end|description=CAGE_peak_10_at_Itga1_5end|id=chr13:115892012..115892032,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.04e-08!130;UBERON:0000925!1.04e-08!130;UBERON:0006595!1.04e-08!130;UBERON:0001007!1.85e-08!128;UBERON:0001555!1.85e-08!128;UBERON:0007026!1.85e-08!128;UBERON:0004921!7.53e-08!126;UBERON:0004185!7.53e-08!126;UBERON:0009569!1.66e-07!66;UBERON:0005409!1.77e-07!59;UBERON:0000160!4.54e-07!43;UBERON:0002048!5.07e-07!14;UBERON:0000117!5.07e-07!14;UBERON:0000171!5.07e-07!14;UBERON:0000170!5.07e-07!14;UBERON:0005597!5.07e-07!14;UBERON:0000118!5.07e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0002048,3.64e-13,14;UBERON:0000117,3.64e-13,14;UBERON:0000171,3.64e-13,14;UBERON:0000170,3.64e-13,14;UBERON:0005597,3.64e-13,14;UBERON:0000118,3.64e-13,14;UBERON:0005157,3.94e-12,20;UBERON:0002113,6.63e-12,14;UBERON:0003918,6.63e-12,14;UBERON:0011143,6.63e-12,14;UBERON:0005095,6.63e-12,14;UBERON:0007687,6.63e-12,14;UBERON:0005177,1.22e-11,79;UBERON:0009569,1.88e-11,66;UBERON:0006554,9.78e-11,18;UBERON:0005153,1.90e-10,17;UBERON:0005178,1.90e-10,17;UBERON:0005181,1.90e-10,17;UBERON:0002224,1.90e-10,17;UBERON:0000915,1.90e-10,17;UBERON:0008947,1.90e-10,17;UBERON:0003258,1.90e-10,17;UBERON:0001008,4.78e-10,19;UBERON:0002100,2.03e-09,90;UBERON:0000489,7.22e-09,21;UBERON:0004921,2.41e-07,114;UBERON:0001007,4.19e-07,116;UBERON:0001555,4.19e-07,116;UBERON:0007026,4.19e-07,116;UBERON:0004119,7.15e-07,118;UBERON:0000925,7.15e-07,118;UBERON:0006595,7.15e-07,118|phase1_expression=0,0.348975407639361,0,0.90739263392049,1.00179145989269,1.34303417529512,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.95995453676044,0.91763712426868,0.57423196411502,0.430761996159075,1.939241094173,0.760093677825496,0.756090389279792,0.443461021310609,0,0,0,0.577703239502549,0.997407872150954,1.42918549383658,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.194429899074283,0,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0.883885756421003,0,0,0,0,0.579728977403356,0.860423876981386,0,0.539703191637817,1.29955283489534,0,0.421333260395256,0.340860645156116,0.259786004602869,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0.230615497256059,0,0,0.251333182659351,0,0.433798070759735,0,0.323533699894818,0.662524555381181,0.484875253135222,0,0,0,1.02182822083437,0,0,0.127070227073065,0,0,0,0,0,0.20778804455956,0.162241263067758,0.916554274652847,0.373220911830279,0.252722758433675,0.420883711772948,0,0,0,0.150704817835715,0.136072998302656,0.384341160854549,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0,0.278047249225598,0,0.61734640922383,0.398068533636986,0.702213187313235,0,0,0.828503090142008,0.938104239924385,0.540186184383045,0.23674473558521,0.787056926989615,0.925602677324269,0.930135779001631,0.804820204198858,1.75148013550754,0.822799249567402,0.985004784474571,0.56748166682099,0,0.658650345873152,0.939444931322602,0,0.102904612379284,0.330418782983798,0.528901133327089,0.213288250535234,0.464473343720877,0.77320476793256,0.201683524623343,1.33426826306922,0.380451252225118,0.474529061544512,0.988193728344065,1.00534083520108,1.59165177632921,1.75467678407208,0.898819408654221,1.08069024937347,1.1948476395262,0.189667900953082,2.05647322697512,5.63538678365402,3.46207257337034,6.0125271021964,4.97964321221262,12.0149420536089,5.31396532726568,5.18095801876537,4.07210640941942,0.889357881261447,0.500535317148282,0.196558995113203,0.224862112384854,0.202860121388503,0,0.50925170356284,1.43848068725405,0.162135226775035,0.549122826376163,1.43768206527355,0.744281895337007,0.936113019343682,0.505157755894224,1.07638448113147,0.964887042726734,1.84753190166605,0.189491411770485,0.325929952884052,0.509235257325564,1.64283173801951,1.00503754465089,0.476087281772027,1.36593553500459,2.99506773801763,3.76489972402917,2.39182152986231,3.11340297959902,4.66249451037918,2.60368305446721,0,0,0,0.275936746304732,0.160550589987792,0,0,0.757412781613119,1.26203287766503,0.390438744296638,1.07711698866399,0.238968797952552,0.668396022247182,0.283076530788832,0.809621403349789,0.876767573733936,0.790575555893047,0,0.425820255624806,0.178065603667255,0.162886959353576,0.494910368917606,1.32745138339963,0.242780636154981,0,0.188605079755898,0,0.922305443831782,0.775284879504663,0.727067458955011,0.356497378384721,1.26414703174326,0,0,0,0.18006109403131,0.129358683782755,0,0,0.356737635204141,0.164549020602121,0,0.469343416127421,0.42366414172764,0,0,0,0.422190474497091,0.358117032009409,0,0.582961673259701,0,0.170870880797853,0,0.555583582109135,0.188368457004691,0.136694227721025,0,0,0,0,0,0.158167996790568,0.406638934253697,0.648032044930808,0.836353184057875,0.4367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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:109700 | |||
|HGNC= | |||
|MCL_coexpression_id=409 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3URV2 | |||
|association_with_transcript=106bp_to_ENSMUST00000036276_5end | |||
|cluster_id=chr13:115892012..115892032,- | |||
|description=CAGE_peak_10_at_Itga1_5end | |||
|id=chr13:115892012..115892032,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.04e-08!130;UBERON:0000925!1.04e-08!130;UBERON:0006595!1.04e-08!130;UBERON:0001007!1.85e-08!128;UBERON:0001555!1.85e-08!128;UBERON:0007026!1.85e-08!128;UBERON:0004921!7.53e-08!126;UBERON:0004185!7.53e-08!126;UBERON:0009569!1.66e-07!66;UBERON:0005409!1.77e-07!59;UBERON:0000160!4.54e-07!43;UBERON:0002048!5.07e-07!14;UBERON:0000117!5.07e-07!14;UBERON:0000171!5.07e-07!14;UBERON:0000170!5.07e-07!14;UBERON:0005597!5.07e-07!14;UBERON:0000118!5.07e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,3.64e-13,14;UBERON:0000117,3.64e-13,14;UBERON:0000171,3.64e-13,14;UBERON:0000170,3.64e-13,14;UBERON:0005597,3.64e-13,14;UBERON:0000118,3.64e-13,14;UBERON:0005157,3.94e-12,20;UBERON:0002113,6.63e-12,14;UBERON:0003918,6.63e-12,14;UBERON:0011143,6.63e-12,14;UBERON:0005095,6.63e-12,14;UBERON:0007687,6.63e-12,14;UBERON:0005177,1.22e-11,79;UBERON:0009569,1.88e-11,66;UBERON:0006554,9.78e-11,18;UBERON:0005153,1.90e-10,17;UBERON:0005178,1.90e-10,17;UBERON:0005181,1.90e-10,17;UBERON:0002224,1.90e-10,17;UBERON:0000915,1.90e-10,17;UBERON:0008947,1.90e-10,17;UBERON:0003258,1.90e-10,17;UBERON:0001008,4.78e-10,19;UBERON:0002100,2.03e-09,90;UBERON:0000489,7.22e-09,21;UBERON:0004921,2.41e-07,114;UBERON:0001007,4.19e-07,116;UBERON:0001555,4.19e-07,116;UBERON:0007026,4.19e-07,116;UBERON:0004119,7.15e-07,118;UBERON:0000925,7.15e-07,118;UBERON:0006595,7.15e-07,118 | |||
|phase1_expression=0,0.348975407639361,0,0.90739263392049,1.00179145989269,1.34303417529512,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.95995453676044,0.91763712426868,0.57423196411502,0.430761996159075,1.939241094173,0.760093677825496,0.756090389279792,0.443461021310609,0,0,0,0.577703239502549,0.997407872150954,1.42918549383658,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.194429899074283,0,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0.883885756421003,0,0,0,0,0.579728977403356,0.860423876981386,0,0.539703191637817,1.29955283489534,0,0.421333260395256,0.340860645156116,0.259786004602869,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0.230615497256059,0,0,0.251333182659351,0,0.433798070759735,0,0.323533699894818,0.662524555381181,0.484875253135222,0,0,0,1.02182822083437,0,0,0.127070227073065,0,0,0,0,0,0.20778804455956,0.162241263067758,0.916554274652847,0.373220911830279,0.252722758433675,0.420883711772948,0,0,0,0.150704817835715,0.136072998302656,0.384341160854549,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0,0.278047249225598,0,0.61734640922383,0.398068533636986,0.702213187313235,0,0,0.828503090142008,0.938104239924385,0.540186184383045,0.23674473558521,0.787056926989615,0.925602677324269,0.930135779001631,0.804820204198858,1.75148013550754,0.822799249567402,0.985004784474571,0.56748166682099,0,0.658650345873152,0.939444931322602,0,0.102904612379284,0.330418782983798,0.528901133327089,0.213288250535234,0.464473343720877,0.77320476793256,0.201683524623343,1.33426826306922,0.380451252225118,0.474529061544512,0.988193728344065,1.00534083520108,1.59165177632921,1.75467678407208,0.898819408654221,1.08069024937347,1.1948476395262,0.189667900953082,2.05647322697512,5.63538678365402,3.46207257337034,6.0125271021964,4.97964321221262,12.0149420536089,5.31396532726568,5.18095801876537,4.07210640941942,0.889357881261447,0.500535317148282,0.196558995113203,0.224862112384854,0.202860121388503,0,0.50925170356284,1.43848068725405,0.162135226775035,0.549122826376163,1.43768206527355,0.744281895337007,0.936113019343682,0.505157755894224,1.07638448113147,0.964887042726734,1.84753190166605,0.189491411770485,0.325929952884052,0.509235257325564,1.64283173801951,1.00503754465089,0.476087281772027,1.36593553500459,2.99506773801763,3.76489972402917,2.39182152986231,3.11340297959902,4.66249451037918,2.60368305446721,0,0,0,0.275936746304732,0.160550589987792,0,0,0.757412781613119,1.26203287766503,0.390438744296638,1.07711698866399,0.238968797952552,0.668396022247182,0.283076530788832,0.809621403349789,0.876767573733936,0.790575555893047,0,0.425820255624806,0.178065603667255,0.162886959353576,0.494910368917606,1.32745138339963,0.242780636154981,0,0.188605079755898,0,0.922305443831782,0.775284879504663,0.727067458955011,0.356497378384721,1.26414703174326,0,0,0,0.18006109403131,0.129358683782755,0,0,0.356737635204141,0.164549020602121,0,0.469343416127421,0.42366414172764,0,0,0,0.422190474497091,0.358117032009409,0,0.582961673259701,0,0.170870880797853,0,0.555583582109135,0.188368457004691,0.136694227721025,0,0,0,0,0,0.158167996790568,0.406638934253697,0.648032044930808,0.836353184057875,0.436725127492355,1.21377911746339,1.57041565878138,1.30877970992015,0.777689839750757,0.621339313086926,0,0.299033092087958,0.496375471371293,0.194451188344048,0,0.168956125490778,0.117357238645754,0.39061315453185,0.419437377702843,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0.147689527174577,0,0,0.201652370273681,0,0,0,0.906921534460845,0,0,0,1.35232715822533,1.31377732815827,0.36630324853453,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0,0,0.222246727801615,0.412070114477788,0,0.505394423527595,0.25347929989024,0.377252682772152,0.468207537349412,0.576226371643824,0.459483751644906,0.476293691283074,0.347652977834566,0,1.23625770240992,0.441596760403192,0,0.887379030796687,0.953744759789284,0.726732083161643,1.03520318456864,0.676916863133412,0.182927972872773,0.789209134313529,0.407412341537585,0,0.949080144993393,0.689531376628944,0.818462086339379,0.619747364743864,0.964533054905707,0,0.233931608445408,0.644613162144895,0.191288332068843,0.882365676478062,0.463735671240843 | |||
|short_description=p10@Itga1 | |||
}} |
Revision as of 15:36, 5 August 2015
Short description: | p10@Itga1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Itga1_5end |
Coexpression cluster: | MCL_coexpression_mm9:409 |
Association with transcript: | 106bp_to_ENSMUST00000036276_5end |
EntrezGene: | 109700 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 3.64e-13 | 14 |
respiratory tube | 3.64e-13 | 14 |
respiration organ | 3.64e-13 | 14 |
pair of lungs | 3.64e-13 | 14 |
lung primordium | 3.64e-13 | 14 |
lung bud | 3.64e-13 | 14 |
epithelial fold | 3.94e-12 | 20 |
kidney | 6.63e-12 | 14 |
kidney mesenchyme | 6.63e-12 | 14 |
upper urinary tract | 6.63e-12 | 14 |
kidney rudiment | 6.63e-12 | 14 |
kidney field | 6.63e-12 | 14 |
trunk region element | 1.22e-11 | 79 |
subdivision of trunk | 1.88e-11 | 66 |
urinary system structure | 9.78e-11 | 18 |
epithelial bud | 1.90e-10 | 17 |
thoracic cavity element | 1.90e-10 | 17 |
thoracic segment organ | 1.90e-10 | 17 |
thoracic cavity | 1.90e-10 | 17 |
thoracic segment of trunk | 1.90e-10 | 17 |
respiratory primordium | 1.90e-10 | 17 |
endoderm of foregut | 1.90e-10 | 17 |
renal system | 4.78e-10 | 19 |
trunk | 2.03e-09 | 90 |
cavitated compound organ | 7.22e-09 | 21 |
subdivision of digestive tract | 2.41e-07 | 114 |
digestive system | 4.19e-07 | 116 |
digestive tract | 4.19e-07 | 116 |
primitive gut | 4.19e-07 | 116 |
endoderm-derived structure | 7.15e-07 | 118 |
endoderm | 7.15e-07 | 118 |
presumptive endoderm | 7.15e-07 | 118 |