FFCP PHASE1:Hg19::chr4:159092769..159092780,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51313 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=25312 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-242bp_to_AB527363,AM392540,AM392704_5end | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_12_at_FAM198B_5end | |||
|id=chr4:159092769..159092780,- | |||
|ontology_enrichment_celltype=CL:0002057!7.33e-32!42;CL:0000860!1.43e-28!45;CL:0002194!6.13e-26!63;CL:0000576!6.13e-26!63;CL:0000040!6.13e-26!63;CL:0000559!6.13e-26!63;CL:0002009!1.49e-24!65;CL:0000839!2.48e-22!70;CL:0000557!9.41e-22!71;CL:0000766!3.85e-20!76;CL:0000763!2.60e-08!112;CL:0000049!2.60e-08!112;CL:0002087!1.20e-07!119;CL:0000048!3.87e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.58e-89;33!CL:0002057;8.58e-89;33!CL:0000473;3.28e-78;39!CL:0000234;3.28e-78;39!CL:0000576;1.88e-41;48!CL:0000766;1.76e-26;69!CL:0000763;2.72e-13;100!CL:0002087;5.39e-11;104!CL:0000738;1.25e-08;136!CL:0000235;3.39e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.05e-82,48;CL:0000234,1.05e-82,48;CL:0000860,2.00e-77,42;CL:0002057,2.00e-77,42;CL:0002194,3.37e-69,59;CL:0000576,3.37e-69,59;CL:0000040,3.37e-69,59;CL:0000559,3.37e-69,59;CL:0002009,9.88e-67,61;CL:0000839,3.31e-61,66;CL:0000557,3.37e-60,67;CL:0000766,1.42e-55,72;CL:0000763,8.51e-35,108;CL:0000049,8.51e-35,108;CL:0002087,2.97e-32,115;CL:0002031,1.28e-30,120;CL:0000738,3.48e-26,136;CL:0002032,5.16e-21,161;CL:0000837,5.16e-21,161;CL:0000037,7.69e-20,168;CL:0000988,1.81e-18,177;CL:0000048,5.42e-09,427;CL:0000723,9.51e-09,433;CL:0000134,1.95e-08,354;CL:0000034,1.97e-08,441;CL:0002320,4.01e-08,361;CL:0000235,4.54e-07,6;CL:0000219,5.07e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.48e-57;42!CL:0000049;1.80e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.96e-20!80;UBERON:0003081!1.09e-17!216;UBERON:0001474!1.64e-17!86;UBERON:0002204!1.72e-17!167;UBERON:0002193!1.15e-16!112;UBERON:0004765!7.77e-16!101;UBERON:0001434!7.77e-16!101;UBERON:0002390!1.89e-15!102;UBERON:0003061!1.89e-15!102;UBERON:0002405!5.14e-15!115;UBERON:0000468!6.82e-13!659;UBERON:0000467!7.70e-13!625;UBERON:0000480!1.01e-12!626;UBERON:0000926!1.29e-10!448;UBERON:0004120!1.29e-10!448;UBERON:0006603!1.29e-10!448;UBERON:0002050!2.48e-09!605;UBERON:0005423!2.48e-09!605;UBERON:0000922!4.69e-09!612;UBERON:0000923!5.14e-09!604;UBERON:0005291!5.14e-09!604;UBERON:0006598!5.14e-09!604;UBERON:0002532!5.14e-09!604;UBERON:0000062!1.01e-08!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.63e-52,76;UBERON:0001474,5.38e-48,82;UBERON:0002405,2.45e-44,93;UBERON:0004765,3.93e-43,90;UBERON:0002390,4.71e-39,98;UBERON:0003061,4.71e-39,98;UBERON:0001434,3.91e-38,100;UBERON:0002193,3.32e-37,108;UBERON:0003081,1.31e-26,203;UBERON:0002204,1.60e-26,167;UBERON:0000926,1.51e-17,315;UBERON:0004120,1.51e-17,315;UBERON:0006603,1.51e-17,315;UBERON:0002384,1.07e-07,371 | |||
|phase1_expression=0.726713517082227,0.856402095563933,0.845726424575827,0,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0,0,0.218441372130172,0,0.123766352960047,0.331397375727916,1.34465029290355,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0.434021741431704,0.895661896959697,0,0.515151135268373,1.01778767145695,1.88937971844405,0.242584061187816,3.25400651667958,4.52284676824008,3.71647645074124,3.16461631554365,2.81776777182011,2.12834006899727,1.03423704220986,3.22742341791913,0,1.69418105588344,4.36649840092553,1.34834090667051,1.83650335422542,1.92557416245656,1.27867425159808,2.30895910130701,0.997318288108159,0.852449501065388,1.7412554317715,1.70215567407342,0.622822248995575,4.27122730936464,2.60741459210101,1.3031330682307,1.81619850790011,1.10483290796269,1.89877432464531,0,0.212604299965044,0.419317291016752,1.01095768031846,1.20141514273205,1.12507910687956,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,1.0843174571537,0.50133791063589,0.289693037921647,0.795285947051099,0,0,0,0.087834785693126,0.130979075497713,0,0,0.649094787309367,0.696518949197069,1.32957960518865,0,0,0.371457501329565,0.198762407366705,0,0,1.13061588384802,0.419499436209906,0,0,0.258416759169329,1.06729878806013,0,0,0,0,0,0,0.892997282840798,1.34717623575702,0.450445921933289,0,0,0.183201743930407,0,0,0,0,0,0.264818361626438,1.43418310374407,0,0,0,0.24666754841716,0.311211035399766,0.404132016209064,0.326923806226917,0,0,0,0.312160076830321,0,0.298897361103602,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,0.337552664482532,0.292311015483596,0,0.184099797284599,0.161646056818812,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.288732895522148,0,0.380508304469197,0,0,1.23108503043699,2.10603838625314,1.18904929830983,0,0.16798212819886,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.723906533337896,0.205476322550383,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.320182673410333,0.606255142892519,0,0,0,0.153461973288062,0,0.768834895534206,2.55853624533352,0.482561763430822,0,0.154209693802656,0.177561725313127,0.246381468041427,0,0.232420756919918,0,0,0,0,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0.340187410553031,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0.096670718292122,0.154048617114644,0,0,0.322260734604821,0.145016693914229,0,0.0890320356467374,0.165284915360978,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,1.00187420719394,0,0,0.571890581771475,0,0.42793898803392,0,0,0.539617372749944,0.274537029736055,0.235624804691373,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0.551365343546124,0,0.438450885253763,0,1.31178950409327,0.405820753925408,0,0,0,0.196498082026242,0,0.354761064070598,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0.23874448473769,0,0.307160702099232,0,0.281338832821026,0,0,0,0.398495976502139,0.828851746593443,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.176915129006678,0,0,0,0,0.202203398942031,0.802577647298789,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.316553979779393,0,0.0801588202515337,0,0,0,0.687219576995494,0,0,0,0,0.271808412147228,0.209205692624666,0,0,0,0.136905378891993,0,0,0,0,0.687481272035051,1.43574604915363,0.199679000498991,0,0.223171457441873,0.470284307407084,0,0,0.0787831823072236,0,0.0674035438541849,0,0,1.59045937961861,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0.315222829196793,0.104909176269996,0,0,0,0.714695326373367,0,0,0.542999601753713,1.72844298240254,0.326587360109409,0,0,0.511164065356265,0,0.146552233678082,0,0.258565912723101,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0,0.250381861413,0,0.332787154610557,0.248385611765534,0,0,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0.189403005275089,0.50313580350515,0.889811221596536,0,1.20984739010591,0.621748802331122,0.73927574994817,0.318593534327405,0,0,0,0,0,0.450772826991655,0,0.406870733204662,0.545545977607678,0.107410557042488,0,0.796191777397232,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0.6153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| |||
|short_description=p12@FAM198B | |||
}} |
Revision as of 03:42, 22 January 2014
Short description: | p12@FAM198B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_FAM198B_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | -242bp_to_AB527363, AM392540, AM392704_5end |
EntrezGene: | FAM198B |
HGNC: | 25312 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.05e-82 | 48 |
phagocyte | 1.05e-82 | 48 |
classical monocyte | 2.00e-77 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.00e-77 | 42 |
monopoietic cell | 3.37e-69 | 59 |
monocyte | 3.37e-69 | 59 |
monoblast | 3.37e-69 | 59 |
promonocyte | 3.37e-69 | 59 |
macrophage dendritic cell progenitor | 9.88e-67 | 61 |
myeloid lineage restricted progenitor cell | 3.31e-61 | 66 |
granulocyte monocyte progenitor cell | 3.37e-60 | 67 |
myeloid leukocyte | 1.42e-55 | 72 |
myeloid cell | 8.51e-35 | 108 |
common myeloid progenitor | 8.51e-35 | 108 |
nongranular leukocyte | 2.97e-32 | 115 |
hematopoietic lineage restricted progenitor cell | 1.28e-30 | 120 |
leukocyte | 3.48e-26 | 136 |
hematopoietic oligopotent progenitor cell | 5.16e-21 | 161 |
hematopoietic multipotent progenitor cell | 5.16e-21 | 161 |
hematopoietic stem cell | 7.69e-20 | 168 |
hematopoietic cell | 1.81e-18 | 177 |
multi fate stem cell | 5.42e-09 | 427 |
somatic stem cell | 9.51e-09 | 433 |
mesenchymal cell | 1.95e-08 | 354 |
stem cell | 1.97e-08 | 441 |
connective tissue cell | 4.01e-08 | 361 |
macrophage | 4.54e-07 | 6 |
motile cell | 5.07e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.63e-52 | 76 |
bone element | 5.38e-48 | 82 |
immune system | 2.45e-44 | 93 |
skeletal element | 3.93e-43 | 90 |
hematopoietic system | 4.71e-39 | 98 |
blood island | 4.71e-39 | 98 |
skeletal system | 3.91e-38 | 100 |
hemolymphoid system | 3.32e-37 | 108 |
lateral plate mesoderm | 1.31e-26 | 203 |
musculoskeletal system | 1.60e-26 | 167 |
mesoderm | 1.51e-17 | 315 |
mesoderm-derived structure | 1.51e-17 | 315 |
presumptive mesoderm | 1.51e-17 | 315 |
connective tissue | 1.07e-07 | 371 |