FFCP PHASE1:Hg19::chr7:127672146..127672170,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64101 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15586 | |||
|TSSclassifier=strong | |||
|UniProt=C9JA92 | |||
|association_with_transcript=0bp_to_ENST00000476782_5end | |||
|coexpression_cluster_id=C1767 | |||
|description=CAGE_peak_3_at_LRRC4_5end | |||
|id=chr7:127672146..127672170,- | |||
|ontology_enrichment_celltype=CL:0000766!9.58e-11!76;CL:0002057!2.65e-09!42;CL:0000094!2.28e-08!8;CL:0000860!4.79e-08!45;CL:0002194!4.25e-07!63;CL:0000576!4.25e-07!63;CL:0000040!4.25e-07!63;CL:0000559!4.25e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000094;4.92e-21;8!CL:0000081;7.07e-15;11!CL:0000775;2.49e-09;3!CL:0000767;3.04e-08;3!CL:0000771;7.25e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,5.10e-21,8;CL:0000081,7.25e-15,11;CL:0000775,2.53e-09,3;CL:0000767,3.17e-08,3;CL:0000771,7.06e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.46e-12;82!UBERON:0006215;2.20e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.17e-38!94;UBERON:0001016!3.17e-38!94;UBERON:0005743!1.25e-37!86;UBERON:0001017!1.21e-36!82;UBERON:0001049!1.52e-35!57;UBERON:0005068!1.52e-35!57;UBERON:0006241!1.52e-35!57;UBERON:0007135!1.52e-35!57;UBERON:0003080!1.69e-33!42;UBERON:0000955!8.65e-33!69;UBERON:0006238!8.65e-33!69;UBERON:0002780!1.00e-32!41;UBERON:0001890!1.00e-32!41;UBERON:0006240!1.00e-32!41;UBERON:0007023!6.56e-32!115;UBERON:0002616!1.09e-30!59;UBERON:0002346!6.39e-28!90;UBERON:0003075!1.41e-27!86;UBERON:0007284!1.41e-27!86;UBERON:0001893!1.56e-27!34;UBERON:0002020!1.06e-26!34;UBERON:0003528!1.06e-26!34;UBERON:0002791!1.35e-26!33;UBERON:0001869!1.96e-26!32;UBERON:0003056!8.25e-26!61;UBERON:0000924!2.41e-22!173;UBERON:0006601!2.41e-22!173;UBERON:0000033!8.31e-22!123;UBERON:0004121!8.94e-22!169;UBERON:0002619!1.63e-21!22;UBERON:0000153!2.69e-21!129;UBERON:0007811!2.69e-21!129;UBERON:0000956!1.02e-20!25;UBERON:0000203!1.02e-20!25;UBERON:0001950!6.39e-20!20;UBERON:0000025!3.69e-11!194;UBERON:0004111!4.15e-11!241;UBERON:0000922!9.33e-11!612;UBERON:0002050!7.12e-10!605;UBERON:0005423!7.12e-10!605;UBERON:0000467!1.01e-09!625;UBERON:0000480!1.32e-09!626;UBERON:0000923!1.34e-09!604;UBERON:0005291!1.34e-09!604;UBERON:0006598!1.34e-09!604;UBERON:0002532!1.34e-09!604;UBERON:0000468!2.10e-09!659;UBERON:0000062!1.76e-08!511;UBERON:0002420!1.79e-08!9;UBERON:0007245!1.79e-08!9;UBERON:0010009!1.79e-08!9;UBERON:0010011!1.79e-08!9;UBERON:0000454!1.79e-08!9;UBERON:0001871!2.30e-08!7;UBERON:0002308!2.03e-07!9;UBERON:0000125!2.03e-07!9;UBERON:0000477!2.52e-07!286;UBERON:0000200!4.72e-07!6;UBERON:0009663!9.48e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.32e-59;22!UBERON:0001869;6.30e-57;32!UBERON:0001950;3.25e-54;20!UBERON:0002791;4.03e-53;32!UBERON:0000956;3.20e-51;25!UBERON:0000203;3.20e-51;25!UBERON:0001893;6.00e-51;34!UBERON:0003528;5.64e-49;34!UBERON:0002020;5.64e-49;34!UBERON:0002780;6.89e-44;41!UBERON:0001890;6.89e-44;41!UBERON:0000073;3.82e-31;53!UBERON:0002616;3.82e-31;53!UBERON:0000955;1.59e-27;68!UBERON:0001017;1.08e-23;75!UBERON:0001016;3.49e-21;83!UBERON:0001871;1.60e-18;6!UBERON:0000200;3.07e-17;6!UBERON:0001872;1.50e-14;5!UBERON:0002420;6.51e-14;9!UBERON:0007245;6.51e-14;9!UBERON:0010009;6.51e-14;9!UBERON:0010011;6.51e-14;9!UBERON:0000454;6.51e-14;9!UBERON:0002021;6.51e-14;5!UBERON:0000349;1.29e-13;5!UBERON:0000369;2.71e-11;4!UBERON:0002435;2.71e-11;4!UBERON:0000204;2.71e-11;4!UBERON:0007023;3.60e-10;114!UBERON:0009663;1.99e-09;7!UBERON:0001870;2.29e-09;3!UBERON:0011216;3.55e-09;132!UBERON:0005383;1.02e-08;3!UBERON:0005382;1.02e-08;3!UBERON:0000125;3.04e-07;9!UBERON:0002308;3.04e-07;9!UBERON:0010314;7.72e-07;132!UBERON:0002771;8.11e-07;2!UBERON:0002702;8.94e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.25e-63,32;UBERON:0002780,2.47e-63,41;UBERON:0001890,2.47e-63,41;UBERON:0003080,2.47e-63,41;UBERON:0006240,2.47e-63,41;UBERON:0000073,2.99e-60,53;UBERON:0002616,2.99e-60,53;UBERON:0001049,8.17e-60,56;UBERON:0005068,8.17e-60,56;UBERON:0006241,8.17e-60,56;UBERON:0007135,8.17e-60,56;UBERON:0001893,1.71e-59,34;UBERON:0002619,6.82e-59,22;UBERON:0002791,7.20e-59,32;UBERON:0001017,2.19e-58,81;UBERON:0001016,1.89e-56,89;UBERON:0000955,1.80e-55,68;UBERON:0006238,1.80e-55,68;UBERON:0003528,5.04e-55,34;UBERON:0002020,5.04e-55,34;UBERON:0001950,2.77e-54,20;UBERON:0000956,2.69e-51,25;UBERON:0000203,2.69e-51,25;UBERON:0003056,1.31e-47,61;UBERON:0003075,2.71e-44,82;UBERON:0007284,2.71e-44,82;UBERON:0002346,1.00e-41,86;UBERON:0010371,1.32e-32,104;UBERON:0007023,3.33e-31,114;UBERON:0004121,6.09e-29,171;UBERON:0000924,6.09e-29,171;UBERON:0006601,6.09e-29,171;UBERON:0010314,2.24e-26,132;UBERON:0011216,2.89e-22,223;UBERON:0001871,1.47e-18,6;UBERON:0000200,2.89e-17,6;UBERON:0001872,1.25e-14,5;UBERON:0002420,6.11e-14,9;UBERON:0007245,6.11e-14,9;UBERON:0010009,6.11e-14,9;UBERON:0010011,6.11e-14,9;UBERON:0000454,6.11e-14,9;UBERON:0002021,7.70e-14,5;UBERON:0000349,1.12e-13,5;UBERON:0000025,1.19e-13,192;UBERON:0000369,2.41e-11,4;UBERON:0002435,2.41e-11,4;UBERON:0000204,2.41e-11,4;UBERON:0010082,2.41e-11,4;UBERON:0004111,6.30e-11,240;UBERON:0001870,2.03e-09,3;UBERON:0009663,2.09e-09,7;UBERON:0005383,8.57e-09,3;UBERON:0005382,8.57e-09,3;UBERON:0000125,3.15e-07,9;UBERON:0002308,3.15e-07,9;UBERON:0002702,8.60e-07,2;UBERON:0002771,9.09e-07,2 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0,0,0,0,1.20538905604795,0,0,0,0,0,0.85870796139317,0,0.125542639594803,0,0,0,3.14691421479123,1.53531759238885,1.23852898652861,0,0.30120591877825,0.369754010166788,0,0,0,1.10799081706375,0.401088894940283,0.651032612147555,4.03047853631864,0,2.31818010870768,3.34415949192999,1.13362783106643,2.42584061187816,0.464858073811369,0.411167888021826,0.619412741790207,0,0,0,0.344745680736619,0.645484683583826,0,3.01187743268168,0.818718450173537,0.674170453335254,0.306083892370903,0.962787081228281,0,0.329851300186716,0.997318288108159,0.852449501065388,0,0,0,0.502497330513487,0.521482918420201,0,0,0.368277635987565,0,0,0.425208599930087,0.209658645508376,0.22465726229299,0.450530678524519,0.964353520182481,0.855038231223746,1.19350006319454,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,1.00803371612366,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,1.76821751921912,0.728590576585084,0,0.324547393654683,0.174129737299267,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0,0.550236083880135,0.208994966536811,0.258416759169329,0,0,0,0,0,0.367663080345869,1.62028389576352,0.17859945656816,0.22452937262617,0.337834441449967,0,0,0.183201743930407,11.8602375692457,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0,0.179389635688862,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0.355009592516614,0,0,0,0,0,0.365921118388786,0.132529768321485,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0,0,0,0,0,0,0.370353780634118,0,0,0,0.231860809950154,0,0.288732895522148,0.462985512576611,0.380508304469197,0,0,0.984868024349589,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0.207328115540772,0.288239906833923,0,0.190493682876507,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.285955987316295,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0.579125226670317,0.410952645100767,0.895304816199478,0,0.591092280605782,0.215627574859517,0.128343036279748,0.254094624222463,1.30139853857622,4.63973287666617,0.837581326671744,2.55175500661265,4.49404214368309,11.966458368161,2.48649308061621,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0.841980283299221,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0.0920809889358963,0,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0,0,0.541892875087706,0,0,0,0.223874754722178,0,0,0.512900250232778,0,0.650756789328606,0.618246069886334,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0,0,0.2023155617111,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0.383010740264733,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,4.97073823883149,2.53204949538923,0,0,0.211125408127993,0.398495976502139,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,3.87733098438087,5.47331779154922,3.99227596002388,0,0.524759999977174,1.44999915086959,0.1137934482855,0,0,0,0,0,3.54296554325536,2.77371808838438,4.5774520895125,1.99042667876204,1.47773809476774,4.8264787373874,0,0.278847488557207,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0.611030144933625,0,0,0.104421949505455,0.67401132980677,0,1.63985112007737,0,0,0,0.394584402849391,1.20990716048664,1.53036380815245,0.821425535170343,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,0.698906672968121,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,4.7483096966909,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0,0,0.577901179803038,1.20084057741958,0.821432273351958,0,0,0,0,0.229160424011684,0,0.199679000498991,0.858452096273142,0,0.268733889946905,0,0,0,0,0,0,0,3.18091875923721,1.49823746722733,0,0.275078873194468,0,0,0,5.1637123159321,0,1.10327990218877,0.472091293214983,0,0,0,0,0.662091970365432,0,0.542999601753713,0,0,1.19730191562487,0,0,0,1.02586563574658,0,0.258565912723101,0.52893040697076,0,0,0.427149650270779,0.314408610199332,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0,5.31640907980192,4.39294553647067,3.8809188519015,0.573409195690071,0.332787154610557,1.67660287941735,0.691743174681154,0,0,0,0,0,0.434763085832475,0,0.467426619694449,0,0.189403005275089,0,0,0,0.151230923763239,0.310874401165561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0.643324774124777,0,0,0,0,0.179088841081487,0.617602894321944,0,0,0,0.168942440653073,0,0.345430341731199,0,4.28601152070365,0,0,0,0,0,0,0,0,0,0,0,0,0.6220772600329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| |||
|short_description=p3@LRRC4 | |||
}} |
Revision as of 19:08, 22 January 2014
Short description: | p3@LRRC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LRRC4_5end |
Coexpression cluster: | C1767_occipital_temporal_cerebellum_postcentral_insula_amygdala_paracentral |
Association with transcript: | 0bp_to_ENST00000476782_5end |
EntrezGene: | LRRC4 |
HGNC: | 15586 |
UniProt: | C9JA92 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 5.10e-21 | 8 |
blood cell | 7.25e-15 | 11 |
neutrophil | 2.53e-09 | 3 |
basophil | 3.17e-08 | 3 |
eosinophil | 7.06e-07 | 2 |