FFCP PHASE1:Mm9::chr3:106563719..106563730,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1633|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:106563719..106563730,-|id=chr3:106563719..106563730,-|ontology_enrichment_celltype=CL:0000988!1.12e-15!32;CL:0002032!1.12e-15!32;CL:0000037!1.12e-15!32;CL:0000566!1.12e-15!32;CL:0000837!1.12e-15!32;CL:0002031!7.46e-14!25;CL:0000738!2.59e-11!17;CL:0002087!2.59e-11!17;CL:0000838!2.78e-11!12;CL:0002320!5.53e-11!46;CL:0000134!5.53e-11!46;CL:0000084!1.68e-10!11;CL:0000827!1.68e-10!11;CL:0000542!4.74e-10!13;CL:0000051!4.74e-10!13;CL:0000791!1.34e-09!9;CL:0000789!1.34e-09!9;CL:0002420!1.34e-09!9;CL:0002419!1.34e-09!9;CL:0000790!1.34e-09!9;CL:0000624!1.05e-08!8;CL:0000219!2.44e-08!54;CL:0000049!2.82e-07!19;CL:0000893!5.59e-07!6;CL:0002489!5.59e-07!6;CL:0000898!5.59e-07!6;CL:0000809!5.59e-07!6;CL:0000810!5.59e-07!6;CL:0000895!5.59e-07!6;CL:0000808!5.59e-07!6;CL:0000894!5.59e-07!6;CL:0000806!5.59e-07!6;CL:0000807!5.59e-07!6;CL:0000805!5.59e-07!6;CL:0002425!5.59e-07!6;CL:0002436!5.59e-07!6;CL:0002427!5.59e-07!6;CL:0002428!5.59e-07!6;CL:0002429!5.59e-07!6;CL:0002433!5.59e-07!6;CL:0002431!5.59e-07!6;CL:0002432!5.59e-07!6|ontology_enrichment_celltype_v019_2=CL:0000988,6.66e-27,32;CL:0002032,6.66e-27,32;CL:0000037,6.66e-27,32;CL:0000837,6.66e-27,32;CL:0002031,5.89e-24,25;CL:0002320,1.03e-22,46;CL:0000134,1.03e-22,46;CL:0000838,3.95e-20,12;CL:0000738,1.43e-19,17;CL:0002087,1.43e-19,17;CL:0000791,4.00e-19,9;CL:0000789,4.00e-19,9;CL:0002420,4.00e-19,9;CL:0002419,4.00e-19,9;CL:0000790,4.00e-19,9;CL:0000084,1.99e-18,11;CL:0000827,1.99e-18,11;CL:0000219,2.12e-18,54;CL:0000542,2.22e-18,13;CL:0000051,2.22e-18,13;CL:0000624,3.60e-17,8;CL:0000034,9.37e-14,97;CL:0000893,2.07e-13,6;CL:0002489,2.07e-13,6;CL:0000898,2.07e-13,6;CL:0000809,2.07e-13,6;CL:0000810,2.07e-13,6;CL:0000895,2.07e-13,6;CL:0000808,2.07e-13,6;CL:0000894,2.07e-13,6;CL:0000806,2.07e-13,6;CL:0000807,2.07e-13,6;CL:0000805,2.07e-13,6;CL:0002425,2.07e-13,6;CL:0002436,2.07e-13,6;CL:0002427,2.07e-13,6;CL:0002428,2.07e-13,6;CL:0002429,2.07e-13,6;CL:0002433,2.07e-13,6;CL:0002431,2.07e-13,6;CL:0002432,2.07e-13,6;CL:0000723,1.24e-11,91;CL:0000048,1.24e-11,91;CL:0000049,8.89e-11,19;CL:0000763,6.62e-09,16;CL:0000553,4.24e-08,6;CL:0000556,4.24e-08,6;CL:0000839,4.59e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.54e-07,3;DOID:4045,1.54e-07,3|ontology_enrichment_uberon=UBERON:0002193!1.38e-24!48;UBERON:0002390!1.32e-22!45;UBERON:0003061!1.32e-22!45;UBERON:0002405!1.88e-20!70;UBERON:0004177!4.28e-12!29;UBERON:0002371!1.92e-11!16;UBERON:0002384!5.53e-11!46;UBERON:0001474!1.08e-10!22;UBERON:0004765!1.08e-10!22;UBERON:0001434!1.08e-10!22;UBERON:0002204!3.61e-10!32;UBERON:0006562!5.54e-10!24;UBERON:0001557!5.54e-10!24;UBERON:0001042!5.54e-10!24;UBERON:0008814!5.54e-10!24;UBERON:0009145!5.54e-10!24;UBERON:0002370!1.25e-09!23;UBERON:0000974!1.25e-09!23;UBERON:0004807!1.25e-09!23;UBERON:0005058!1.25e-09!23;UBERON:0003351!1.25e-09!23;UBERON:0009113!1.25e-09!23;UBERON:0003295!1.25e-09!23;UBERON:0009722!1.25e-09!23;UBERON:0005562!1.25e-09!23;UBERON:0007690!1.25e-09!23;UBERON:0005057!2.15e-09!51;UBERON:0003081!4.61e-09!88;UBERON:0000072!4.66e-09!27;UBERON:0003408!5.88e-09!24;UBERON:0000065!1.06e-07!41;UBERON:0001004!2.53e-07!42;UBERON:0000063!9.09e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.03e-22,46;UBERON:0002193,1.33e-22,48;UBERON:0002405,1.33e-22,48;UBERON:0002390,1.45e-20,45;UBERON:0003061,1.45e-20,45;UBERON:0002371,4.65e-16,16;UBERON:0001474,4.64e-15,22;UBERON:0004765,4.64e-15,22;UBERON:0001434,4.64e-15,22;UBERON:0002204,7.95e-15,32;UBERON:0003081,1.21e-09,87;UBERON:0000926,1.19e-07,120;UBERON:0004120,1.19e-07,120;UBERON:0006603,1.19e-07,120;UBERON:0004177,1.28e-07,29;UBERON:0005057,1.28e-07,29|phase1_expression=0,0,0,0,0,0,0,2.96983643915625,6.61706994112834,4.44722600011788,12.4989116804619,7.41881078656629,3.42401459862411,2.71003247498892,0.999329285446988,1.01237633694913,1.39912375625629,5.52058789376916,6.7186072466812,1.69755860719212,0.17008658030214,1.39007331681239,0.261199789138935,1.75991665072747,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,6.27797446105362,3.1253413780952,7.85285615960697,3.52938892818609,6.83045484958446,5.82612423637384,0.125896817975577,0,0.183546752161682,0,0,0,0,0,0,2.51673909086605,5.80289713609076,5.37750078627942,0,0,0,0,0,0,0,0,2.6996991518442,3.9554654502679,1.4209602298922,0.299600110518405,0,0,0.135005938331691,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0.253359865475099,0,0.68510327831436,1.8125651855302,0,0,0,0,0,0.352766121407114,0,0,0,2.65383165584962,0,0.662524555381181,1.45462575940567,0,0,0,0.255457055208591,1.7972268675888,0,1.90605340609597,0,0,0,0,0,0.20778804455956,0,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,0.772043721344145,2.55747149456033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0.898819408654221,0,0,0,0,0,0.203651327845314,0,0,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0.202860121388503,0.482354319504834,0,0,0.972811360650212,0.549122826376163,4.31304619582064,0.372140947668503,0,0,0.179397413521912,0.482443521363367,0.369506380333209,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0.163863314715738,0.172684981865896,0.144649058581512,16.5870412333199,8.70249094109935,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,2.39219233116994,1.23832120777933,0,1.31857919903284,0.546776910884101,2.28778173206523,2.37969801991397,3.35883485576779,1.93479963326193,0.954670618015114,0.158167996790568,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,1.58005560314089,0.202725215290164,0.308132871494482,0.129920822977795,0.179026695667481,0.39736270956253,1.08175904567972,0.738447635872886,0.403865799792591,0.0762068066549998,0.100826185136841,0.584747284438515,0.384847366561318,0.935015217452552,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0,0.685082519770642,0,0.675022500231806,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0.271608227691724,0.561142271657738,0,0,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p@chr3:106563719..106563730,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1633 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:106563719..106563730,- | |||
|description=CAGE_peak_at_chr3:106563719..106563730,- | |||
|id=chr3:106563719..106563730,- | |||
|ontology_enrichment_celltype=CL:0000988!1.12e-15!32;CL:0002032!1.12e-15!32;CL:0000037!1.12e-15!32;CL:0000566!1.12e-15!32;CL:0000837!1.12e-15!32;CL:0002031!7.46e-14!25;CL:0000738!2.59e-11!17;CL:0002087!2.59e-11!17;CL:0000838!2.78e-11!12;CL:0002320!5.53e-11!46;CL:0000134!5.53e-11!46;CL:0000084!1.68e-10!11;CL:0000827!1.68e-10!11;CL:0000542!4.74e-10!13;CL:0000051!4.74e-10!13;CL:0000791!1.34e-09!9;CL:0000789!1.34e-09!9;CL:0002420!1.34e-09!9;CL:0002419!1.34e-09!9;CL:0000790!1.34e-09!9;CL:0000624!1.05e-08!8;CL:0000219!2.44e-08!54;CL:0000049!2.82e-07!19;CL:0000893!5.59e-07!6;CL:0002489!5.59e-07!6;CL:0000898!5.59e-07!6;CL:0000809!5.59e-07!6;CL:0000810!5.59e-07!6;CL:0000895!5.59e-07!6;CL:0000808!5.59e-07!6;CL:0000894!5.59e-07!6;CL:0000806!5.59e-07!6;CL:0000807!5.59e-07!6;CL:0000805!5.59e-07!6;CL:0002425!5.59e-07!6;CL:0002436!5.59e-07!6;CL:0002427!5.59e-07!6;CL:0002428!5.59e-07!6;CL:0002429!5.59e-07!6;CL:0002433!5.59e-07!6;CL:0002431!5.59e-07!6;CL:0002432!5.59e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,6.66e-27,32;CL:0002032,6.66e-27,32;CL:0000037,6.66e-27,32;CL:0000837,6.66e-27,32;CL:0002031,5.89e-24,25;CL:0002320,1.03e-22,46;CL:0000134,1.03e-22,46;CL:0000838,3.95e-20,12;CL:0000738,1.43e-19,17;CL:0002087,1.43e-19,17;CL:0000791,4.00e-19,9;CL:0000789,4.00e-19,9;CL:0002420,4.00e-19,9;CL:0002419,4.00e-19,9;CL:0000790,4.00e-19,9;CL:0000084,1.99e-18,11;CL:0000827,1.99e-18,11;CL:0000219,2.12e-18,54;CL:0000542,2.22e-18,13;CL:0000051,2.22e-18,13;CL:0000624,3.60e-17,8;CL:0000034,9.37e-14,97;CL:0000893,2.07e-13,6;CL:0002489,2.07e-13,6;CL:0000898,2.07e-13,6;CL:0000809,2.07e-13,6;CL:0000810,2.07e-13,6;CL:0000895,2.07e-13,6;CL:0000808,2.07e-13,6;CL:0000894,2.07e-13,6;CL:0000806,2.07e-13,6;CL:0000807,2.07e-13,6;CL:0000805,2.07e-13,6;CL:0002425,2.07e-13,6;CL:0002436,2.07e-13,6;CL:0002427,2.07e-13,6;CL:0002428,2.07e-13,6;CL:0002429,2.07e-13,6;CL:0002433,2.07e-13,6;CL:0002431,2.07e-13,6;CL:0002432,2.07e-13,6;CL:0000723,1.24e-11,91;CL:0000048,1.24e-11,91;CL:0000049,8.89e-11,19;CL:0000763,6.62e-09,16;CL:0000553,4.24e-08,6;CL:0000556,4.24e-08,6;CL:0000839,4.59e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.54e-07,3;DOID:4045,1.54e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.38e-24!48;UBERON:0002390!1.32e-22!45;UBERON:0003061!1.32e-22!45;UBERON:0002405!1.88e-20!70;UBERON:0004177!4.28e-12!29;UBERON:0002371!1.92e-11!16;UBERON:0002384!5.53e-11!46;UBERON:0001474!1.08e-10!22;UBERON:0004765!1.08e-10!22;UBERON:0001434!1.08e-10!22;UBERON:0002204!3.61e-10!32;UBERON:0006562!5.54e-10!24;UBERON:0001557!5.54e-10!24;UBERON:0001042!5.54e-10!24;UBERON:0008814!5.54e-10!24;UBERON:0009145!5.54e-10!24;UBERON:0002370!1.25e-09!23;UBERON:0000974!1.25e-09!23;UBERON:0004807!1.25e-09!23;UBERON:0005058!1.25e-09!23;UBERON:0003351!1.25e-09!23;UBERON:0009113!1.25e-09!23;UBERON:0003295!1.25e-09!23;UBERON:0009722!1.25e-09!23;UBERON:0005562!1.25e-09!23;UBERON:0007690!1.25e-09!23;UBERON:0005057!2.15e-09!51;UBERON:0003081!4.61e-09!88;UBERON:0000072!4.66e-09!27;UBERON:0003408!5.88e-09!24;UBERON:0000065!1.06e-07!41;UBERON:0001004!2.53e-07!42;UBERON:0000063!9.09e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.03e-22,46;UBERON:0002193,1.33e-22,48;UBERON:0002405,1.33e-22,48;UBERON:0002390,1.45e-20,45;UBERON:0003061,1.45e-20,45;UBERON:0002371,4.65e-16,16;UBERON:0001474,4.64e-15,22;UBERON:0004765,4.64e-15,22;UBERON:0001434,4.64e-15,22;UBERON:0002204,7.95e-15,32;UBERON:0003081,1.21e-09,87;UBERON:0000926,1.19e-07,120;UBERON:0004120,1.19e-07,120;UBERON:0006603,1.19e-07,120;UBERON:0004177,1.28e-07,29;UBERON:0005057,1.28e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,2.96983643915625,6.61706994112834,4.44722600011788,12.4989116804619,7.41881078656629,3.42401459862411,2.71003247498892,0.999329285446988,1.01237633694913,1.39912375625629,5.52058789376916,6.7186072466812,1.69755860719212,0.17008658030214,1.39007331681239,0.261199789138935,1.75991665072747,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,6.27797446105362,3.1253413780952,7.85285615960697,3.52938892818609,6.83045484958446,5.82612423637384,0.125896817975577,0,0.183546752161682,0,0,0,0,0,0,2.51673909086605,5.80289713609076,5.37750078627942,0,0,0,0,0,0,0,0,2.6996991518442,3.9554654502679,1.4209602298922,0.299600110518405,0,0,0.135005938331691,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0.253359865475099,0,0.68510327831436,1.8125651855302,0,0,0,0,0,0.352766121407114,0,0,0,2.65383165584962,0,0.662524555381181,1.45462575940567,0,0,0,0.255457055208591,1.7972268675888,0,1.90605340609597,0,0,0,0,0,0.20778804455956,0,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,0.772043721344145,2.55747149456033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0.898819408654221,0,0,0,0,0,0.203651327845314,0,0,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0.202860121388503,0.482354319504834,0,0,0.972811360650212,0.549122826376163,4.31304619582064,0.372140947668503,0,0,0.179397413521912,0.482443521363367,0.369506380333209,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0.163863314715738,0.172684981865896,0.144649058581512,16.5870412333199,8.70249094109935,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,2.39219233116994,1.23832120777933,0,1.31857919903284,0.546776910884101,2.28778173206523,2.37969801991397,3.35883485576779,1.93479963326193,0.954670618015114,0.158167996790568,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,1.58005560314089,0.202725215290164,0.308132871494482,0.129920822977795,0.179026695667481,0.39736270956253,1.08175904567972,0.738447635872886,0.403865799792591,0.0762068066549998,0.100826185136841,0.584747284438515,0.384847366561318,0.935015217452552,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0,0.685082519770642,0,0.675022500231806,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0.271608227691724,0.561142271657738,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr3:106563719..106563730,- | |||
}} |
Latest revision as of 19:46, 5 August 2015
Short description: | p@chr3:106563719..106563730, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:106563719..106563730, - |
Coexpression cluster: | MCL_coexpression_mm9:1633 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.03e-22 | 46 |
hemolymphoid system | 1.33e-22 | 48 |
immune system | 1.33e-22 | 48 |
hematopoietic system | 1.45e-20 | 45 |
blood island | 1.45e-20 | 45 |
bone marrow | 4.65e-16 | 16 |
bone element | 4.64e-15 | 22 |
skeletal element | 4.64e-15 | 22 |
skeletal system | 4.64e-15 | 22 |
musculoskeletal system | 7.95e-15 | 32 |
lateral plate mesoderm | 1.21e-09 | 87 |
mesoderm | 1.19e-07 | 120 |
mesoderm-derived structure | 1.19e-07 | 120 |
presumptive mesoderm | 1.19e-07 | 120 |
hemopoietic organ | 1.28e-07 | 29 |
immune organ | 1.28e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.54e-07 | 3 |
muscle cancer | 1.54e-07 | 3 |