FFCP PHASE1:Hg19::chr7:5568847..5568888,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=132 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=142bp_to_uc003sor.3_5end | |||
|description=CAGE_peak_18_at_ACTB_5end | |||
|id=chr7:5568847..5568888,- | |||
|ontology_enrichment_celltype=CL:0000766!5.39e-11!76;CL:0000557!7.68e-11!71;CL:0002057!7.99e-11!42;CL:0002009!8.33e-11!65;CL:0000839!4.48e-10!70;CL:0002194!4.77e-10!63;CL:0000576!4.77e-10!63;CL:0000040!4.77e-10!63;CL:0000559!4.77e-10!63;CL:0000860!2.30e-09!45;CL:0000763!2.75e-08!112;CL:0000049!2.75e-08!112;CL:0000738!2.95e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.04e-12;39!CL:0000234;3.04e-12;39!CL:0000860;3.37e-12;33!CL:0002057;3.37e-12;33!CL:0000766;1.42e-08;69!CL:0000576;1.98e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,8.70e-16,67;CL:0000473,1.05e-15,48;CL:0000234,1.05e-15,48;CL:0000766,1.05e-15,72;CL:0002009,9.37e-15,61;CL:0000839,3.66e-14,66;CL:0000860,1.39e-13,42;CL:0002057,1.39e-13,42;CL:0002194,1.48e-13,59;CL:0000576,1.48e-13,59;CL:0000040,1.48e-13,59;CL:0000559,1.48e-13,59;CL:0000763,7.07e-12,108;CL:0000049,7.07e-12,108;CL:0000738,1.46e-09,136;CL:0002031,5.14e-08,120;CL:0002032,3.04e-07,161;CL:0000837,3.04e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;5.58e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.04e-10!80;UBERON:0002204!2.54e-09!167;UBERON:0004765!2.72e-09!101;UBERON:0001434!2.72e-09!101;UBERON:0001474!4.07e-09!86;UBERON:0002405!3.11e-08!115;UBERON:0002390!2.36e-07!102;UBERON:0003061!2.36e-07!102;UBERON:0003081!2.53e-07!216;UBERON:0002193!8.95e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.12e-14,76;UBERON:0001474,3.54e-14,82;UBERON:0002405,1.66e-12,93;UBERON:0004765,2.05e-12,90;UBERON:0003081,4.14e-12,203;UBERON:0001434,6.22e-12,100;UBERON:0002204,8.26e-12,167;UBERON:0002390,1.64e-10,98;UBERON:0003061,1.64e-10,98;UBERON:0002193,7.66e-10,108 | |||
|phase1_expression=1.09007027562334,0.428201047781966,0.704772020479856,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0.522371256399677,0,1.39560233594486,0.218441372130172,1.05506791291381,0.37129905888014,0,3.36162573225888,2.41077811209591,1.46062018077475,2.43966399395253,0.246242116153576,0.408001382488506,1.25381888591235,0.572471974262113,1.09499540058307,1.38096903554283,1.06978768047132,0.492603536699674,1.02324015707783,1.18009283054671,0.383829398097213,3.40595471295367,0.919421224478927,2.10844143144775,1.84877005083394,0.46480320348181,0.142169232487422,0.293600439334847,0.553995408531877,0,1.51907609501096,1.11957737119962,0,0.257575567634187,2.76256653681173,1.13362783106643,1.69808842831471,2.09186133215116,1.6446715520873,1.23882548358041,2.01384674625505,1.2808035326455,0.47296445977717,0.689491361473237,3.87290810150296,4.06279459783025,2.25890807451126,1.09162460023138,2.02251136000576,6.42776173978895,0.320929027076094,1.27867425159808,0.329851300186716,3.19141852194611,1.27867425159808,1.45104619314292,2.8369261234557,2.4912889959823,2.26123798731069,3.12889751052121,1.08594422352558,0.605399502633369,0.368277635987565,0.316462387440884,1.26753171787165,2.97646019951061,0,1.23561494261145,1.95229960693958,0.48217676009124,1.99508920618874,3.58050018958362,0.91332076882317,0,0,0,0.853460445133014,0.800791974072025,0,0,0,0,0,0,0,0,0.790152254325231,0.196709770113833,0.393010762749165,0.205601498999509,1.17030546773475,0.651844533267181,0.473447805734733,0,2.1167986808183,1.76763544484902,0.664601683750863,0.270803863765016,2.5618263945135,2.60118695119756,2.30213066445147,0.276350017785848,0.579606171470105,0.444859689486181,0.267540828089713,0,1.58633079776593,1.14966148080576,0.68725489096526,0.253019692019503,0,0,1.90090408889675,0.150575119077773,0.383959833463255,1.24930726552346,0.947109008176067,0.821127996921047,0.403213486449465,0.267440195783507,0.289648807765598,0,0.670700859703636,2.42938867502708,0.361439152384566,0,0.434539556882471,0,0.973269740605272,0.945348171640679,0.221729397462564,0.790513071238134,0.523916301990851,0.728590576585084,1.48313777113772,0.649094787309367,1.0447784237956,3.45690697349049,0,0.571994910780128,0.371457501329565,1.39133685156694,0.860234595106124,0.347140501607594,0.56530794192401,0.838998872419812,1.10047216776027,2.08994966536811,1.03366703667732,0,0.33472061276467,0.402829317109147,1.52054421143703,2.19655851793353,0.367663080345869,0,0.535798369704479,0.44905874525234,1.57656072676651,1.53316637465883,0,1.83201743930407,0,0,1.3082821564276,3.47880366186723,0.759783069987479,1.32409180813219,0,1.41867352879343,0.560677600142307,0,1.2333377420858,0,1.0776853765575,0.326923806226917,0,0,0.234321431833797,0.312160076830321,1.1409436430889,0.896692083310806,0.352303495931295,0,0.140450806702248,0.408308342509787,0.491337269247072,0.309977343527296,2.37600571456411,0.741800787835671,0.910161361938026,0,0.168336113954066,0.375355559615893,0.277064115484183,1.75591048352335,1.5324389789951,3.15499923703853,1.02088964844019,0.358779271377724,0.213557388818567,1.05965950579781,0,0.309157587715317,0,0.744467425326359,1.35021065793013,0.68205903612839,0.252433774244115,0.184099797284599,0.646584227275248,0,0.201504196455281,0.169560592310488,0.386521706326594,0.818238361772504,0,0.121973706129595,0,0.116193942869518,0.10366105501537,1.26160425437814,0,1.56449532329816,1.28648187638577,0,0,0,1.41968160047813,1.34867752062481,1.68707720918437,3.19852520923942,0.653638332277218,0.71181185733329,2.83145747136345,0.98110732562673,0.769494313892781,0.738155454624648,2.80483547606892,1.2347220339942,4.41026134156626,0,0.982827216677626,0,0,0.368965315629341,1.20097467208968,0.878002283269004,0,1.10581869652794,0.555530670951178,0,0,0,0.231860809950154,1.29149563659404,0,0.462985512576611,1.14152491340759,1.58040879591855,0,0.738651018262192,0,3.12125440806329,1.87467667973554,0.839910640994298,0.850650583454319,0.268675568108545,0.290633938513962,2.68367875415648,0,1.40877494421162,1.4512968087854,1.00883967391873,1.8936365013957,0.571481048629521,0.381988425558278,0,0,0.308482478109971,0.600686115687835,0.285826432630578,0,0,0.66004457238855,0.517086863031111,0,0,0.26593811658487,1.04007436911366,1.02882949704857,1.41849132023278,1.8649552531127,0.285955987316295,0,0,1.30294473717494,1.42156779497018,0.791951872933429,0,1.74306691720059,1.09970290300263,2.43247561282381,3.51579964002488,4.21667878966063,0.239624855491583,1.14861935834114,0,1.44781306667579,0.205476322550383,0.895304816199478,0.336255431980582,0.197030760201927,0.431255149719035,0.513372145118994,0.254094624222463,0,0,0.335032530668698,2.55175500661265,0.749007023947182,2.99161459204025,1.65766205374414,0.613457458595699,0.500170521059677,0.271265023699736,3.95144636908534,7.31558854068363,2.83864347061082,2.22568688486155,0.601892199455438,0,0,0,1.10621501125022,0.60818530127658,0.195801157462741,0,0.206768026122887,0.431428401637234,1.38745825144478,0.606255142892519,0,0.302390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| |||
|short_description=p18@ACTB | |||
}} |
Revision as of 15:34, 22 January 2014
Short description: | p18@ACTB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_ACTB_5end |
Coexpression cluster: | NA |
Association with transcript: | 142bp_to_uc003sor.3_5end |
EntrezGene: | ACTB |
HGNC: | 132 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 8.70e-16 | 67 |
defensive cell | 1.05e-15 | 48 |
phagocyte | 1.05e-15 | 48 |
myeloid leukocyte | 1.05e-15 | 72 |
macrophage dendritic cell progenitor | 9.37e-15 | 61 |
myeloid lineage restricted progenitor cell | 3.66e-14 | 66 |
classical monocyte | 1.39e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.39e-13 | 42 |
monopoietic cell | 1.48e-13 | 59 |
monocyte | 1.48e-13 | 59 |
monoblast | 1.48e-13 | 59 |
promonocyte | 1.48e-13 | 59 |
myeloid cell | 7.07e-12 | 108 |
common myeloid progenitor | 7.07e-12 | 108 |
leukocyte | 1.46e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 5.14e-08 | 120 |
hematopoietic oligopotent progenitor cell | 3.04e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.04e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.12e-14 | 76 |
bone element | 3.54e-14 | 82 |
immune system | 1.66e-12 | 93 |
skeletal element | 2.05e-12 | 90 |
lateral plate mesoderm | 4.14e-12 | 203 |
skeletal system | 6.22e-12 | 100 |
musculoskeletal system | 8.26e-12 | 167 |
hematopoietic system | 1.64e-10 | 98 |
blood island | 1.64e-10 | 98 |
hemolymphoid system | 7.66e-10 | 108 |