FFCP PHASE1:Mm9::chr5:37419556..37419567,+: Difference between revisions
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{{FFCP|EntrezGene=76071|HGNC=|MCL_coexpression_id=1|UniProt=G3UXP1|association_with_transcript=-6bp_to_ENSMUST00000173836_5end|description=CAGE_peak_7_at_Jakmip1_5end|id=chr5:37419556..37419567,+|ontology_enrichment_celltype=CL:0000117!9.67e-18!23;CL:0000337!9.67e-18!23;CL:0000540!1.59e-10!33;CL:0000047!1.59e-10!33;CL:0000031!1.59e-10!33;CL:0000404!1.59e-10!33;CL:0000393!1.36e-07!39;CL:0000211!1.36e-07!39;CL:0002319!4.08e-07!43;CL:0000221!9.09e-07!44;CL:0000133!9.09e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,9.39e-30,23;CL:0000337,9.39e-30,23;CL:0000540,4.66e-19,33;CL:0000047,4.66e-19,33;CL:0000031,4.66e-19,33;CL:0000404,4.66e-19,33;CL:0000393,2.72e-15,39;CL:0000211,2.72e-15,39;CL:0002319,2.25e-13,43;CL:0000221,5.97e-13,44;CL:0000133,5.97e-13,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.10e-26!71;UBERON:0003075!1.10e-26!71;UBERON:0007284!1.10e-26!71;UBERON:0001049!3.67e-25!52;UBERON:0005068!3.67e-25!52;UBERON:0006241!3.67e-25!52;UBERON:0007135!3.67e-25!52;UBERON:0000955!5.74e-24!50;UBERON:0006238!5.74e-24!50;UBERON:0002020!7.91e-24!34;UBERON:0000033!1.80e-23!63;UBERON:0002616!4.41e-23!49;UBERON:0000073!1.04e-22!75;UBERON:0001016!1.04e-22!75;UBERON:0001017!2.32e-22!73;UBERON:0005743!2.32e-22!73;UBERON:0004121!1.39e-21!102;UBERON:0000924!1.39e-21!102;UBERON:0006601!1.39e-21!102;UBERON:0003056!1.29e-20!49;UBERON:0002791!6.21e-20!29;UBERON:0003528!6.21e-20!29;UBERON:0001893!6.21e-20!29;UBERON:0003080!1.47e-19!40;UBERON:0002780!1.13e-18!39;UBERON:0001890!1.13e-18!39;UBERON:0006240!1.13e-18!39;UBERON:0000956!1.38e-13!21;UBERON:0001869!1.38e-13!21;UBERON:0000203!1.38e-13!21;UBERON:0007811!3.05e-12!86;UBERON:0002619!1.07e-10!17;UBERON:0000153!2.28e-10!94;UBERON:0002021!4.42e-10!10;UBERON:0000411!4.42e-10!10;UBERON:0001950!4.42e-10!10;UBERON:0002420!1.36e-07!8;UBERON:0007245!1.36e-07!8;UBERON:0010009!1.36e-07!8;UBERON:0010011!1.36e-07!8;UBERON:0000454!1.36e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.21e-43,34;UBERON:0000073,1.67e-43,54;UBERON:0001017,4.37e-40,73;UBERON:0001049,7.20e-40,52;UBERON:0005068,7.20e-40,52;UBERON:0006241,7.20e-40,52;UBERON:0007135,7.20e-40,52;UBERON:0001016,9.52e-39,75;UBERON:0003528,1.04e-35,29;UBERON:0002791,1.04e-35,29;UBERON:0001893,1.04e-35,29;UBERON:0000955,1.11e-32,47;UBERON:0006238,1.11e-32,47;UBERON:0003080,1.95e-31,40;UBERON:0002616,4.77e-31,46;UBERON:0002346,1.12e-30,64;UBERON:0003075,1.12e-30,64;UBERON:0007284,1.12e-30,64;UBERON:0002780,9.97e-30,39;UBERON:0001890,9.97e-30,39;UBERON:0006240,9.97e-30,39;UBERON:0004121,1.83e-28,95;UBERON:0000924,1.83e-28,95;UBERON:0006601,1.83e-28,95;UBERON:0010371,9.07e-26,73;UBERON:0003056,2.85e-24,49;UBERON:0000956,6.80e-23,21;UBERON:0001869,6.80e-23,21;UBERON:0000203,6.80e-23,21;UBERON:0002021,5.38e-19,10;UBERON:0000411,5.38e-19,10;UBERON:0001950,5.38e-19,10;UBERON:0010314,1.44e-18,92;UBERON:0002619,4.12e-17,17;UBERON:0002420,6.51e-14,8;UBERON:0007245,6.51e-14,8;UBERON:0010009,6.51e-14,8;UBERON:0010011,6.51e-14,8;UBERON:0000454,6.51e-14,8;UBERON:0000025,3.00e-13,114;UBERON:0004111,8.51e-12,122;UBERON:0002240,4.17e-10,6;UBERON:0005174,4.17e-10,6;UBERON:0001137,4.17e-10,6;UBERON:0000369,1.17e-09,5;UBERON:0002435,1.17e-09,5;UBERON:0000204,1.17e-09,5;UBERON:0010082,1.17e-09,5;UBERON:0001948,8.10e-09,5;UBERON:0002315,8.10e-09,5;UBERON:0011216,9.74e-09,194;UBERON:0003076,1.71e-08,12;UBERON:0003057,1.71e-08,12;UBERON:0002950,1.28e-07,4;UBERON:0001891,1.28e-07,4;UBERON:0009616,1.28e-07,4;UBERON:0010286,1.28e-07,4|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83243045203437,2.64495489636016,3.1691570175309,0,0,0,0,0,0,0,2.48855069540346,1.62007125998029,2.10324961351382,1.99955689082663,1.54607978666129,0.367472397644862,0.479227355091182,1.83843757322004,4.40463523997555,2.55374676170375,2.76491759861238,2.50583946687368,2.74462930807229,2.6045668527838,2.23346399201105,2.8138130501584,1.98637722109853,2.35702868378934,3.98640706237488,2.60959224155421,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0.173485326766136,0.608930956624282,0.230615497256059,0.150722640552623,0.117588707135705,0.251333182659351,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0.11981512450592,0,0,3.89455662452539,5.94750783664214,3.01570445070875,3.65031072403781,5.62574006126727,2.70124457927428,4.54275536589721,0,0,0.252722758433675,0.210441855886474,0,0,0.180062129805349,0.452114453507145,0.272145996605311,0.512454881139399,0.187403449119458,0.776110112217047,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57492912559016,2.26390147234426,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0.397912944082302,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21101179975584,3.5163505977661,0,0,0,0,0,0,0,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:76071 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G3UXP1 | |||
|association_with_transcript=-6bp_to_ENSMUST00000173836_5end | |||
|cluster_id=chr5:37419556..37419567,+ | |||
|description=CAGE_peak_7_at_Jakmip1_5end | |||
|id=chr5:37419556..37419567,+ | |||
|ontology_enrichment_celltype=CL:0000117!9.67e-18!23;CL:0000337!9.67e-18!23;CL:0000540!1.59e-10!33;CL:0000047!1.59e-10!33;CL:0000031!1.59e-10!33;CL:0000404!1.59e-10!33;CL:0000393!1.36e-07!39;CL:0000211!1.36e-07!39;CL:0002319!4.08e-07!43;CL:0000221!9.09e-07!44;CL:0000133!9.09e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.39e-30,23;CL:0000337,9.39e-30,23;CL:0000540,4.66e-19,33;CL:0000047,4.66e-19,33;CL:0000031,4.66e-19,33;CL:0000404,4.66e-19,33;CL:0000393,2.72e-15,39;CL:0000211,2.72e-15,39;CL:0002319,2.25e-13,43;CL:0000221,5.97e-13,44;CL:0000133,5.97e-13,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.10e-26!71;UBERON:0003075!1.10e-26!71;UBERON:0007284!1.10e-26!71;UBERON:0001049!3.67e-25!52;UBERON:0005068!3.67e-25!52;UBERON:0006241!3.67e-25!52;UBERON:0007135!3.67e-25!52;UBERON:0000955!5.74e-24!50;UBERON:0006238!5.74e-24!50;UBERON:0002020!7.91e-24!34;UBERON:0000033!1.80e-23!63;UBERON:0002616!4.41e-23!49;UBERON:0000073!1.04e-22!75;UBERON:0001016!1.04e-22!75;UBERON:0001017!2.32e-22!73;UBERON:0005743!2.32e-22!73;UBERON:0004121!1.39e-21!102;UBERON:0000924!1.39e-21!102;UBERON:0006601!1.39e-21!102;UBERON:0003056!1.29e-20!49;UBERON:0002791!6.21e-20!29;UBERON:0003528!6.21e-20!29;UBERON:0001893!6.21e-20!29;UBERON:0003080!1.47e-19!40;UBERON:0002780!1.13e-18!39;UBERON:0001890!1.13e-18!39;UBERON:0006240!1.13e-18!39;UBERON:0000956!1.38e-13!21;UBERON:0001869!1.38e-13!21;UBERON:0000203!1.38e-13!21;UBERON:0007811!3.05e-12!86;UBERON:0002619!1.07e-10!17;UBERON:0000153!2.28e-10!94;UBERON:0002021!4.42e-10!10;UBERON:0000411!4.42e-10!10;UBERON:0001950!4.42e-10!10;UBERON:0002420!1.36e-07!8;UBERON:0007245!1.36e-07!8;UBERON:0010009!1.36e-07!8;UBERON:0010011!1.36e-07!8;UBERON:0000454!1.36e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.21e-43,34;UBERON:0000073,1.67e-43,54;UBERON:0001017,4.37e-40,73;UBERON:0001049,7.20e-40,52;UBERON:0005068,7.20e-40,52;UBERON:0006241,7.20e-40,52;UBERON:0007135,7.20e-40,52;UBERON:0001016,9.52e-39,75;UBERON:0003528,1.04e-35,29;UBERON:0002791,1.04e-35,29;UBERON:0001893,1.04e-35,29;UBERON:0000955,1.11e-32,47;UBERON:0006238,1.11e-32,47;UBERON:0003080,1.95e-31,40;UBERON:0002616,4.77e-31,46;UBERON:0002346,1.12e-30,64;UBERON:0003075,1.12e-30,64;UBERON:0007284,1.12e-30,64;UBERON:0002780,9.97e-30,39;UBERON:0001890,9.97e-30,39;UBERON:0006240,9.97e-30,39;UBERON:0004121,1.83e-28,95;UBERON:0000924,1.83e-28,95;UBERON:0006601,1.83e-28,95;UBERON:0010371,9.07e-26,73;UBERON:0003056,2.85e-24,49;UBERON:0000956,6.80e-23,21;UBERON:0001869,6.80e-23,21;UBERON:0000203,6.80e-23,21;UBERON:0002021,5.38e-19,10;UBERON:0000411,5.38e-19,10;UBERON:0001950,5.38e-19,10;UBERON:0010314,1.44e-18,92;UBERON:0002619,4.12e-17,17;UBERON:0002420,6.51e-14,8;UBERON:0007245,6.51e-14,8;UBERON:0010009,6.51e-14,8;UBERON:0010011,6.51e-14,8;UBERON:0000454,6.51e-14,8;UBERON:0000025,3.00e-13,114;UBERON:0004111,8.51e-12,122;UBERON:0002240,4.17e-10,6;UBERON:0005174,4.17e-10,6;UBERON:0001137,4.17e-10,6;UBERON:0000369,1.17e-09,5;UBERON:0002435,1.17e-09,5;UBERON:0000204,1.17e-09,5;UBERON:0010082,1.17e-09,5;UBERON:0001948,8.10e-09,5;UBERON:0002315,8.10e-09,5;UBERON:0011216,9.74e-09,194;UBERON:0003076,1.71e-08,12;UBERON:0003057,1.71e-08,12;UBERON:0002950,1.28e-07,4;UBERON:0001891,1.28e-07,4;UBERON:0009616,1.28e-07,4;UBERON:0010286,1.28e-07,4 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83243045203437,2.64495489636016,3.1691570175309,0,0,0,0,0,0,0,2.48855069540346,1.62007125998029,2.10324961351382,1.99955689082663,1.54607978666129,0.367472397644862,0.479227355091182,1.83843757322004,4.40463523997555,2.55374676170375,2.76491759861238,2.50583946687368,2.74462930807229,2.6045668527838,2.23346399201105,2.8138130501584,1.98637722109853,2.35702868378934,3.98640706237488,2.60959224155421,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0.173485326766136,0.608930956624282,0.230615497256059,0.150722640552623,0.117588707135705,0.251333182659351,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0.11981512450592,0,0,3.89455662452539,5.94750783664214,3.01570445070875,3.65031072403781,5.62574006126727,2.70124457927428,4.54275536589721,0,0,0.252722758433675,0.210441855886474,0,0,0.180062129805349,0.452114453507145,0.272145996605311,0.512454881139399,0.187403449119458,0.776110112217047,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57492912559016,2.26390147234426,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0.397912944082302,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21101179975584,3.5163505977661,0,0,0,0,0,0,0,0,0,0,0,3.53453448063988,0,0.178065603667255,0,0.494910368917606,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0,0,0.188368457004691,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0.337912250981556,0.234714477291508,0.13020438484395,0.314578033277133,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.0827665835536,2.30162618253588,6.87474616127276,5.84300819968538,2.74033007908257,1.5107877947794,6.75022500231806,4.95353323546643,4.07828168085784,3.62432218226274,0,0,0.341467211508268,0.243106717068294,1.04806581313991,1.2869045591501,0.44449345560323,0.824140228955577,0.320919209591815,0,0.760437899670719,0.188626341386076,0.37456602987953,0.384150914429216,0.402048282689293,0.952587382566147,0.579421629724277,0.578727661391115,0.412085900803307,0.294397840268795,1.02860775715625,0.177475806159338,0,0.290692833264657,0.658765662907314,0.930760686808441,0.548783918618318,0.263069711437843,0.271608227691724,1.12228454331548,0.711810108745045,0.886540341380071,1.63692417267876,0.619747364743864,0.578719832943424,0.249810577937946,0.233931608445408,0,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p7@Jakmip1 | |||
}} |
Revision as of 09:24, 4 August 2015
Short description: | p7@Jakmip1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Jakmip1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -6bp_to_ENSMUST00000173836_5end |
EntrezGene: | 76071 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.39e-30 | 23 |
neuroblast (sensu Vertebrata) | 9.39e-30 | 23 |
neuron | 4.66e-19 | 33 |
neuronal stem cell | 4.66e-19 | 33 |
neuroblast | 4.66e-19 | 33 |
electrically signaling cell | 4.66e-19 | 33 |
electrically responsive cell | 2.72e-15 | 39 |
electrically active cell | 2.72e-15 | 39 |
neural cell | 2.25e-13 | 43 |
ectodermal cell | 5.97e-13 | 44 |
neurectodermal cell | 5.97e-13 | 44 |