FFCP PHASE1:Mm9::chr7:29940690..29940710,+: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=88|UniProt=|association_with_transcript=0bp_to_ENSMUST00000053062_5end|description=CAGE_peak_2_at_ENSMUST00000053062_5end|id=chr7:29940690..29940710,+|ontology_enrichment_celltype=CL:0002563!1.36e-07!9;CL:0002251!1.36e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,4.85e-20,9;CL:0002251,4.85e-20,9;CL:0000239,4.72e-14,6;CL:0000677,4.72e-14,6;CL:0000584,4.72e-14,6;CL:0000066,1.10e-12,25;CL:0000075,6.55e-12,7;CL:0002076,3.29e-11,15;CL:0000223,8.90e-10,20;CL:0002250,1.46e-07,3;CL:0000682,4.67e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!2.18e-09!15;UBERON:0001242!2.08e-08!13;UBERON:0000060!2.08e-08!13;UBERON:0001262!2.08e-08!13;UBERON:0004786!2.08e-08!13;UBERON:0000160!2.94e-08!43;UBERON:0003350!1.36e-07!9;UBERON:0004808!1.36e-07!9;UBERON:0001277!1.36e-07!9;UBERON:0005409!7.01e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.28e-23,31;UBERON:0003350,4.85e-20,9;UBERON:0004808,4.85e-20,9;UBERON:0001277,4.85e-20,9;UBERON:0000344,1.88e-19,15;UBERON:0001242,2.15e-19,13;UBERON:0001262,2.15e-19,13;UBERON:0004786,2.15e-19,13;UBERON:0000485,5.06e-16,11;UBERON:0005409,2.37e-15,47;UBERON:0004923,4.77e-11,24;UBERON:0001007,6.79e-07,116;UBERON:0001555,6.79e-07,116;UBERON:0007026,6.79e-07,116|phase1_expression=0,3.14077866875425,7.27998783023258,17.5429242557961,13.5241847085514,3.86122325397347,4.43864017131499,1.80772652818207,2.53419699873,0.936258105287974,0.171217968225505,0.239316476986009,0.513602189793617,1.74840804837995,0,0,0,0.630924330716475,0.685572168028694,0.42438965179803,0.425216450755349,1.29078236561151,0.261199789138935,0.95995453676044,1.83527424853736,4.59385571292016,2.15380998079537,2.15471232685889,0.570070258369122,0.252030129759931,1.33038306393183,3.81018404075779,1.84519436275371,0,6.93243887403059,2.49351968037739,5.3084032628216,0.418531630736908,0.7813353445238,0,0,0,0,0.377690453926732,0.101376931219515,0.183546752161682,0,0,0,0.388859798148567,0.139986421625363,0,0.335565212115473,2.90144856804538,0.672187598284928,0.257259436035947,0,1.03134418455488,0.202316460859598,0,0,0,0,0.449949858640699,0,1.4209602298922,0.898800331555214,1.15265491596466,0,0.270011876663381,0.210324961351382,0,0.220868540951614,0.244981598429908,0.0958454710182364,0,0,0.383062014255563,0.153606533256243,0,0,0,0.558365998002762,0,0.30559649555362,0,0,0,0.151452386666368,0,2.89864488701678,0.860423876981386,0,0,0.649776417447669,0.448026887097336,0.280888840263504,0,0.259786004602869,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,0.34255163915718,0.517875767294343,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0.251333182659351,0,0.144599356919912,2.65383165584962,0.323533699894818,0.662524555381181,0.484875253135222,1.86391761218122,0.878342391034642,0.209446706813455,1.27728527604296,0.479260498023681,0,0.508280908292259,0.299581278809645,0.457500602818626,0,0.347648640384553,0.255715457330331,0.20778804455956,0.162241263067758,0.203678727700633,0.248813941220186,0.505445516867349,0.420883711772948,0,0.229902104433473,0.540186389416048,0.150704817835715,0.408218994907967,0.2562274405697,0,0.517406741478031,0.215567992932842,0,0,0,0,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0,0.16455984991348,0,0.243206428637567,0.146199987425332,0.219550115291051,0.402619256281115,0.210289948564127,0.205809224758569,3.30418782983798,0.793351699990633,0,0,0.644337306610467,0.80673409849337,0.444756087689741,0.570676878337677,2.37264530772256,0.658795818896044,1.75934646160189,1.59165177632921,0.974820435595601,2.69645822596266,3.6743468478698,3.38540164532424,0.379335801906163,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.252946148497029,0.147610147979602,0.156998727841375,0.740382983530803,0,0.333690211432188,0.196558995113203,0,0,0,0.25462585178142,0,0,0,1.43768206527355,0.372140947668503,0,0.252578877947112,0.358794827043824,0.482443521363367,0.369506380333209,0.189491411770485,0,0.339490171550376,0,0.502518772325447,0,0.585400943573396,0.472905432318573,0.8858587585951,0.318909537314974,0.491589944147214,0.345369963731791,0.867894351489069,0,0,0.491764273019036,0,0.160550589987792,0.468846746368813,0,0.504941854408746,0.631016438832513,0,0.646270193198397,0.716906393857656,0.668396022247182,0.283076530788832,0,0.584511715822624,0.395287777946524,0,0.425820255624806,0,0.162886959353576,0.659880491890142,0,0.485561272309963,0.302323556964751,0,0.295301892880773,0,0.516856586336442,0.363533729477506,0,0,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0,0,0,0.42366414172764,0.661585194164886,1.15420377059036,0.161464426695906,0.482503399425247,0.954978752025092,1.80554989719567,1.45740418314925,0.370850604021019,0.341741761595705,0.206386867963223,0,0.188368457004691,0.546776910884101,0,0.509935289981566,0.69975726161829,0.276399947608848,0,0,0.20331946712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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=88 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000053062_5end | |||
|cluster_id=chr7:29940690..29940710,+ | |||
|description=CAGE_peak_2_at_ENSMUST00000053062_5end | |||
|id=chr7:29940690..29940710,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.36e-07!9;CL:0002251!1.36e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.85e-20,9;CL:0002251,4.85e-20,9;CL:0000239,4.72e-14,6;CL:0000677,4.72e-14,6;CL:0000584,4.72e-14,6;CL:0000066,1.10e-12,25;CL:0000075,6.55e-12,7;CL:0002076,3.29e-11,15;CL:0000223,8.90e-10,20;CL:0002250,1.46e-07,3;CL:0000682,4.67e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.18e-09!15;UBERON:0001242!2.08e-08!13;UBERON:0000060!2.08e-08!13;UBERON:0001262!2.08e-08!13;UBERON:0004786!2.08e-08!13;UBERON:0000160!2.94e-08!43;UBERON:0003350!1.36e-07!9;UBERON:0004808!1.36e-07!9;UBERON:0001277!1.36e-07!9;UBERON:0005409!7.01e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.28e-23,31;UBERON:0003350,4.85e-20,9;UBERON:0004808,4.85e-20,9;UBERON:0001277,4.85e-20,9;UBERON:0000344,1.88e-19,15;UBERON:0001242,2.15e-19,13;UBERON:0001262,2.15e-19,13;UBERON:0004786,2.15e-19,13;UBERON:0000485,5.06e-16,11;UBERON:0005409,2.37e-15,47;UBERON:0004923,4.77e-11,24;UBERON:0001007,6.79e-07,116;UBERON:0001555,6.79e-07,116;UBERON:0007026,6.79e-07,116 | |||
|phase1_expression=0,3.14077866875425,7.27998783023258,17.5429242557961,13.5241847085514,3.86122325397347,4.43864017131499,1.80772652818207,2.53419699873,0.936258105287974,0.171217968225505,0.239316476986009,0.513602189793617,1.74840804837995,0,0,0,0.630924330716475,0.685572168028694,0.42438965179803,0.425216450755349,1.29078236561151,0.261199789138935,0.95995453676044,1.83527424853736,4.59385571292016,2.15380998079537,2.15471232685889,0.570070258369122,0.252030129759931,1.33038306393183,3.81018404075779,1.84519436275371,0,6.93243887403059,2.49351968037739,5.3084032628216,0.418531630736908,0.7813353445238,0,0,0,0,0.377690453926732,0.101376931219515,0.183546752161682,0,0,0,0.388859798148567,0.139986421625363,0,0.335565212115473,2.90144856804538,0.672187598284928,0.257259436035947,0,1.03134418455488,0.202316460859598,0,0,0,0,0.449949858640699,0,1.4209602298922,0.898800331555214,1.15265491596466,0,0.270011876663381,0.210324961351382,0,0.220868540951614,0.244981598429908,0.0958454710182364,0,0,0.383062014255563,0.153606533256243,0,0,0,0.558365998002762,0,0.30559649555362,0,0,0,0.151452386666368,0,2.89864488701678,0.860423876981386,0,0,0.649776417447669,0.448026887097336,0.280888840263504,0,0.259786004602869,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,0.34255163915718,0.517875767294343,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0.251333182659351,0,0.144599356919912,2.65383165584962,0.323533699894818,0.662524555381181,0.484875253135222,1.86391761218122,0.878342391034642,0.209446706813455,1.27728527604296,0.479260498023681,0,0.508280908292259,0.299581278809645,0.457500602818626,0,0.347648640384553,0.255715457330331,0.20778804455956,0.162241263067758,0.203678727700633,0.248813941220186,0.505445516867349,0.420883711772948,0,0.229902104433473,0.540186389416048,0.150704817835715,0.408218994907967,0.2562274405697,0,0.517406741478031,0.215567992932842,0,0,0,0,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0,0.16455984991348,0,0.243206428637567,0.146199987425332,0.219550115291051,0.402619256281115,0.210289948564127,0.205809224758569,3.30418782983798,0.793351699990633,0,0,0.644337306610467,0.80673409849337,0.444756087689741,0.570676878337677,2.37264530772256,0.658795818896044,1.75934646160189,1.59165177632921,0.974820435595601,2.69645822596266,3.6743468478698,3.38540164532424,0.379335801906163,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.252946148497029,0.147610147979602,0.156998727841375,0.740382983530803,0,0.333690211432188,0.196558995113203,0,0,0,0.25462585178142,0,0,0,1.43768206527355,0.372140947668503,0,0.252578877947112,0.358794827043824,0.482443521363367,0.369506380333209,0.189491411770485,0,0.339490171550376,0,0.502518772325447,0,0.585400943573396,0.472905432318573,0.8858587585951,0.318909537314974,0.491589944147214,0.345369963731791,0.867894351489069,0,0,0.491764273019036,0,0.160550589987792,0.468846746368813,0,0.504941854408746,0.631016438832513,0,0.646270193198397,0.716906393857656,0.668396022247182,0.283076530788832,0,0.584511715822624,0.395287777946524,0,0.425820255624806,0,0.162886959353576,0.659880491890142,0,0.485561272309963,0.302323556964751,0,0.295301892880773,0,0.516856586336442,0.363533729477506,0,0,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0,0,0,0.42366414172764,0.661585194164886,1.15420377059036,0.161464426695906,0.482503399425247,0.954978752025092,1.80554989719567,1.45740418314925,0.370850604021019,0.341741761595705,0.206386867963223,0,0.188368457004691,0.546776910884101,0,0.509935289981566,0.69975726161829,0.276399947608848,0,0,0.203319467126849,0.432021363287205,0.418176592028937,0.436725127492355,0.269728692769641,0.247960367176008,0.26175594198403,3.6292192521702,0.621339313086926,7.32800820289447,0.149516546043979,0.330916980914195,0.194451188344048,0.258319646955462,0,0.234714477291508,0.2604087696879,0.209718688851422,1.69108884578204,2.30424005006292,0,0.405450430580328,0.410843828659309,0.129920822977795,0,0.198681354781265,0.120195449519969,0.443068581523732,0.100966449948148,0.228620419965,0.302478555410522,0.292373642219257,0.288635524920988,0.116876902181569,0.680191150845634,0.221985953374065,0.358855426437903,0.167884616364078,1.15913756419314,0.375364950902364,0,0.428736758158132,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0.252697211763798,1.2673964994512,0,0.655490552289177,0.320125762024346,0.17230640686684,0,0.347652977834566,0.192909220463705,0.412085900803307,0.147198920134397,0,0.177475806159338,0.476872379894642,0.145346416632329,0.282328141245992,0.25384382367503,0.365855945745545,0.263069711437843,0.407412341537585,0,0.118635018124174,0,0,0,0.385813221962283,0.249810577937946,0.233931608445408,0.859484216193193,0.191288332068843,0,0 | |||
|short_description=p2@ENSMUST00000053062 | |||
}} |
Latest revision as of 23:54, 4 August 2015
Short description: | p2@ENSMUST00000053062 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENSMUST00000053062_5end |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | 0bp_to_ENSMUST00000053062_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.85e-20 | 9 |
epithelial cell of alimentary canal | 4.85e-20 | 9 |
brush border epithelial cell | 4.72e-14 | 6 |
gut absorptive cell | 4.72e-14 | 6 |
enterocyte | 4.72e-14 | 6 |
epithelial cell | 1.10e-12 | 25 |
columnar/cuboidal epithelial cell | 6.55e-12 | 7 |
endo-epithelial cell | 3.29e-11 | 15 |
endodermal cell | 8.90e-10 | 20 |
intestinal crypt stem cell | 1.46e-07 | 3 |
M cell of gut | 4.67e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.28e-23 | 31 |
epithelium of mucosa | 4.85e-20 | 9 |
gastrointestinal system epithelium | 4.85e-20 | 9 |
intestinal epithelium | 4.85e-20 | 9 |
mucosa | 1.88e-19 | 15 |
intestinal mucosa | 2.15e-19 | 13 |
wall of intestine | 2.15e-19 | 13 |
gastrointestinal system mucosa | 2.15e-19 | 13 |
simple columnar epithelium | 5.06e-16 | 11 |
gastrointestinal system | 2.37e-15 | 47 |
organ component layer | 4.77e-11 | 24 |
digestive system | 6.79e-07 | 116 |
digestive tract | 6.79e-07 | 116 |
primitive gut | 6.79e-07 | 116 |