FFCP PHASE1:Hg19::chr15:72522527..72522551,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=5315 | |EntrezGene=entrezgene:5315 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=9021 | |HGNC=HGNC:9021 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=P14618 | |UniProt=uniprot:P14618 | ||
|association_with_transcript=-464bp_to_NM_001206799,uc010bit.1_5end | |association_with_transcript=-464bp_to_NM_001206799,uc010bit.1_5end | ||
|cluster_id=chr15:72522527..72522551,- | |||
|coexpression_cluster_id=C6 | |coexpression_cluster_id=C6 | ||
|description=CAGE_peak_18_at_PKM2_5end | |description=CAGE_peak_18_at_PKM2_5end | ||
Revision as of 03:59, 25 July 2015
| Short description: | p18@PKM2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_18_at_PKM2_5end |
| Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
| Association with transcript: | -464bp_to_NM_001206799, uc010bit.1_5end |
| EntrezGene: | 5315 |
| HGNC: | 9021 |
| UniProt: | P14618 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p18@PKM2 |
|---|
0
5
10
15
20
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| classical monocyte | 9.93e-66 | 42 |
| CD14-positive, CD16-negative classical monocyte | 9.93e-66 | 42 |
| defensive cell | 5.81e-57 | 48 |
| phagocyte | 5.81e-57 | 48 |
| myeloid leukocyte | 7.40e-56 | 72 |
| monopoietic cell | 1.11e-44 | 59 |
| monocyte | 1.11e-44 | 59 |
| monoblast | 1.11e-44 | 59 |
| promonocyte | 1.11e-44 | 59 |
| macrophage dendritic cell progenitor | 4.27e-43 | 61 |
Showing 1 to 10 of 35 entries
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 7.90e-34 | 76 |
| bone element | 4.65e-31 | 82 |
| hematopoietic system | 8.19e-31 | 98 |
| blood island | 8.19e-31 | 98 |
| skeletal element | 6.22e-28 | 90 |
| hemolymphoid system | 1.52e-27 | 108 |
| immune system | 6.75e-27 | 93 |
| skeletal system | 1.01e-24 | 100 |
| musculoskeletal system | 4.66e-13 | 167 |
| lateral plate mesoderm | 1.87e-12 | 203 |
Showing 1 to 10 of 11 entries
