FF:11245-116E3: Difference between revisions

Revision as of 14:56, 15 May 2017

Name:	Fibroblast - Aortic Adventitial, donor1
Species:	Human (Homo sapiens)
Library ID:	CNhs10874
Sample type:	primary cells
Genomic View:	UCSC
FANTOM CAT:	1, 2, 3, 4, 5, 6, 7, 8, 9
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	aorta
dev stage	68 years old adult
sex	female
age	68
cell type	fibroblast
cell line	NA
company	Lonza
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	N/A
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005860

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs10874		CAGE		DRX008240		DRR009112

Accession ID Hg19

Library id		BAM		CTSS
CNhs10874		DRZ000537		DRZ001922

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.0308
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.245
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0.0259
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.658
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.137
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.105
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0.0518
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.33
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.0475
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.0426
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0.098
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.152
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.00935
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.098
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	-0.0292
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.0339
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.148
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.261
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.0518
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.826
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.29
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.499
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.774
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.591
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.692
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10874

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.123
MA0003.1	MA0003.1	0.955
MA0004.1	MA0004.1	0.0686
MA0006.1	MA0006.1	0.0704
MA0007.1	MA0007.1	0.797
MA0009.1	MA0009.1	0.286
MA0014.1	MA0014.1	0.452
MA0017.1	MA0017.1	0.151
MA0018.2	MA0018.2	6.68389e-7
MA0019.1	MA0019.1	0.456
MA0024.1	MA0024.1	0.926
MA0025.1	MA0025.1	0.0426
MA0027.1	MA0027.1	0.705
MA0028.1	MA0028.1	0.886
MA0029.1	MA0029.1	0.318
MA0030.1	MA0030.1	0.0933
MA0031.1	MA0031.1	0.074
MA0035.2	MA0035.2	0.388
MA0038.1	MA0038.1	0.224
MA0039.2	MA0039.2	0.039
MA0040.1	MA0040.1	0.806
MA0041.1	MA0041.1	0.665
MA0042.1	MA0042.1	0.913
MA0043.1	MA0043.1	1.40105e-4
MA0046.1	MA0046.1	0.0816
MA0047.2	MA0047.2	0.363
MA0048.1	MA0048.1	0.0257
MA0050.1	MA0050.1	0.00607
MA0051.1	MA0051.1	0.214
MA0052.1	MA0052.1	0.312
MA0055.1	MA0055.1	0.447
MA0057.1	MA0057.1	0.327
MA0058.1	MA0058.1	0.0238
MA0059.1	MA0059.1	0.76
MA0060.1	MA0060.1	0.0647
MA0061.1	MA0061.1	0.0304
MA0062.2	MA0062.2	3.90044e-4
MA0065.2	MA0065.2	0.303
MA0066.1	MA0066.1	0.45
MA0067.1	MA0067.1	8.83091e-4
MA0068.1	MA0068.1	0.72
MA0069.1	MA0069.1	0.222
MA0070.1	MA0070.1	0.937
MA0071.1	MA0071.1	0.342
MA0072.1	MA0072.1	0.257
MA0073.1	MA0073.1	0.799
MA0074.1	MA0074.1	0.897
MA0076.1	MA0076.1	0.297
MA0077.1	MA0077.1	0.63
MA0078.1	MA0078.1	0.797
MA0079.2	MA0079.2	0.669
MA0080.2	MA0080.2	5.43151e-8
MA0081.1	MA0081.1	0.0342
MA0083.1	MA0083.1	0.0275
MA0084.1	MA0084.1	0.0838
MA0087.1	MA0087.1	0.231
MA0088.1	MA0088.1	0.702
MA0090.1	MA0090.1	7.04462e-5
MA0091.1	MA0091.1	0.123
MA0092.1	MA0092.1	0.0501
MA0093.1	MA0093.1	0.0783
MA0099.2	MA0099.2	0.361
MA0100.1	MA0100.1	0.927
MA0101.1	MA0101.1	9.17684e-4
MA0102.2	MA0102.2	0.0039
MA0103.1	MA0103.1	0.00242
MA0104.2	MA0104.2	0.0415
MA0105.1	MA0105.1	0.638
MA0106.1	MA0106.1	0.163
MA0107.1	MA0107.1	0.00149
MA0108.2	MA0108.2	0.445
MA0111.1	MA0111.1	0.086
MA0112.2	MA0112.2	0.0714
MA0113.1	MA0113.1	0.503
MA0114.1	MA0114.1	0.0546
MA0115.1	MA0115.1	0.0351
MA0116.1	MA0116.1	0.219
MA0117.1	MA0117.1	0.485
MA0119.1	MA0119.1	0.0633
MA0122.1	MA0122.1	0.72
MA0124.1	MA0124.1	0.762
MA0125.1	MA0125.1	0.869
MA0131.1	MA0131.1	0.895
MA0135.1	MA0135.1	0.167
MA0136.1	MA0136.1	9.60864e-9
MA0137.2	MA0137.2	0.777
MA0138.2	MA0138.2	0.843
MA0139.1	MA0139.1	0.494
MA0140.1	MA0140.1	0.626
MA0141.1	MA0141.1	0.357
MA0142.1	MA0142.1	0.346
MA0143.1	MA0143.1	0.699
MA0144.1	MA0144.1	0.736
MA0145.1	MA0145.1	0.544
MA0146.1	MA0146.1	0.149
MA0147.1	MA0147.1	0.284
MA0148.1	MA0148.1	0.412
MA0149.1	MA0149.1	0.89
MA0150.1	MA0150.1	0.069
MA0152.1	MA0152.1	0.0061
MA0153.1	MA0153.1	0.224
MA0154.1	MA0154.1	0.428
MA0155.1	MA0155.1	0.397
MA0156.1	MA0156.1	3.10264e-5
MA0157.1	MA0157.1	0.641
MA0159.1	MA0159.1	0.535
MA0160.1	MA0160.1	0.0117
MA0162.1	MA0162.1	0.0353
MA0163.1	MA0163.1	0.0172
MA0164.1	MA0164.1	0.937
MA0258.1	MA0258.1	0.912
MA0259.1	MA0259.1	0.356

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10874

Novel motif	Logo	P-value
1	1	0.9
10	10	0.538
100	100	0.735
101	101	0.508
102	102	0.295
103	103	0.277
104	104	0.878
105	105	0.156
106	106	0.578
107	107	0.0835
108	108	0.813
109	109	0.286
11	11	0.735
110	110	0.729
111	111	0.457
112	112	0.949
113	113	0.00468
114	114	0.471
115	115	0.0756
116	116	0.104
117	117	0.981
118	118	0.322
119	119	0.554
12	12	0.182
120	120	0.184
121	121	0.923
122	122	0.101
123	123	2.27635e-4
124	124	0.0798
125	125	0.948
126	126	0.26
127	127	0.0952
128	128	0.809
129	129	0.692
13	13	0.892
130	130	0.622
131	131	0.342
132	132	0.764
133	133	0.501
134	134	0.647
135	135	0.867
136	136	0.221
137	137	0.243
138	138	0.0842
139	139	0.801
14	14	0.14
140	140	0.517
141	141	0.903
142	142	0.692
143	143	0.754
144	144	0.857
145	145	0.267
146	146	0.448
147	147	0.128
148	148	0.551
149	149	0.0121
15	15	0.52
150	150	0.0388
151	151	0.456
152	152	0.0828
153	153	0.681
154	154	0.935
155	155	0.00345
156	156	0.425
157	157	0.096
158	158	0.00212
159	159	0.167
16	16	0.0363
160	160	0.555
161	161	0.834
162	162	0.894
163	163	0.9
164	164	0.331
165	165	0.612
166	166	0.31
167	167	0.757
168	168	0.631
169	169	0.254
17	17	0.628
18	18	0.199
19	19	0.0165
2	2	0.599
20	20	0.657
21	21	0.0673
22	22	0.608
23	23	0.675
24	24	0.677
25	25	0.359
26	26	0.79
27	27	0.894
28	28	0.248
29	29	0.309
3	3	0.729
30	30	0.458
31	31	0.66
32	32	6.11409e-11
33	33	0.866
34	34	0.694
35	35	0.687
36	36	0.0779
37	37	0.251
38	38	0.328
39	39	0.266
4	4	0.444
40	40	0.297
41	41	0.783
42	42	0.728
43	43	0.66
44	44	0.106
45	45	0.474
46	46	0.537
47	47	0.788
48	48	0.832
49	49	0.125
5	5	0.897
50	50	0.946
51	51	0.732
52	52	0.832
53	53	0.0691
54	54	0.905
55	55	0.243
56	56	0.653
57	57	0.955
58	58	0.238
59	59	0.268
6	6	0.284
60	60	0.645
61	61	0.591
62	62	0.743
63	63	0.547
64	64	0.592
65	65	0.657
66	66	0.703
67	67	0.721
68	68	0.876
69	69	0.606
7	7	0.47
70	70	0.797
71	71	0.301
72	72	0.957
73	73	0.0184
74	74	0.0721
75	75	0.394
76	76	0.313
77	77	0.0559
78	78	0.344
79	79	0.00357
8	8	0.217
80	80	0.497
81	81	0.793
82	82	0.984
83	83	0.75
84	84	0.418
85	85	0.965
86	86	0.607
87	87	0.017
88	88	0.608
89	89	0.0765
9	9	0.933
90	90	0.646
91	91	0.673
92	92	0.502
93	93	0.487
94	94	0.85
95	95	0.319
96	96	0.433
97	97	0.572
98	98	0.104
99	99	0.0075

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs10874

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000058 human fibroblast of the aortic adventitia sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000057 (fibroblast)
1000306 (fibroblast of tunica adventitia of artery)
0002547 (fibroblast of the aortic adventitia)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000947 (aorta)
0001637 (artery)
0000483 (epithelium)
0002384 (connective tissue)
0000479 (tissue)
0000055 (vessel)
0000064 (organ part)
0000062 (organ)
0004111 (anatomical conduit)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0003914 (epithelial tube)
0000025 (tube)
0004923 (organ component layer)
0000477 (anatomical cluster)
0000467 (anatomical system)
0000060 (anatomical wall)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0004573 (systemic artery)
0003509 (arterial blood vessel)
0007500 (epithelial tube open at both ends)
0001981 (blood vessel)
0002049 (vasculature)
0004797 (blood vessel layer)
0010317 (germ layer / neural crest derived structure)
0007798 (vascular system)
0000415 (artery wall)
0007240 (tunica adventitia of artery)
0005742 (adventitia)
0005734 (tunica adventitia of blood vessel)
0004664 (aorta tunica adventitia)
0004535 (cardiovascular system)
0004571 (systemic arterial system)
0010191 (aortic system)
0004572 (arterial system)
0004537 (blood vasculature)
0001009 (circulatory system)
0004663 (aorta wall)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000057 (fibroblast sample)
0000001 (sample)
0000058 (human fibroblast of the aortic adventitia sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)

@@ Line 13: / Line 13: @@
 |def=
 |expression_enrichment_score=chr1:170632285..170632309,+!p1@PRRX1!1.70!55.84!PRRX1;;chr8:55370487..55370503,+!p1@SOX17!1.59!37.48!SOX17;;chr1:170633348..170633399,+!p2@PRRX1!1.56!47.49!PRRX1;;chr2:19558373..19558392,-!p1@OSR1!1.53!87.25!OSR1;;chr1:170633262..170633285,+!p3@PRRX1!1.43!29.25!PRRX1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.36!21.91!ZBED1;;chr21:38071430..38071456,+!p1@SIM2!1.33!20.26!SIM2;;chr18:19749541..19749557,+!p1@GATA6!1.26!53.44!GATA6;;chr18:19749386..19749404,+!p2@GATA6!1.25!24.06!GATA6;;chr20:30433396..30433414,-!p1@FOXS1!1.25!16.59!FOXS1;;chr4:174450089..174450153,-!p2@HAND2!1.24!16.46!HAND2;;chr4:174451370..174451387,-!p1@HAND2!1.14!12.92!HAND2;;chr11:46299199..46299233,+!p1@CREB3L1!1.13!64.08!CREB3L1;;chr1:170633058..170633084,+!p5@PRRX1!1.13!12.41!PRRX1;;chr1:170632959..170632987,+!p4@PRRX1!1.12!13.42!PRRX1;;chr8:72756637..72756664,-!p3@MSC!1.06!11.90!MSC;;chr16:86600426..86600441,+!p1@FOXC2!1.05!25.71!FOXC2;;chr15:42749722..42749739,-!p2@ZFP106!1.02!17.10!ZFP106;;chr8:72756667..72756736,-!p2@MSC!1.02!15.07!MSC;;chr1:170632477..170632506,+!p6@PRRX1!0.99!8.74!PRRX1;;chr19:13134772..13134822,+!p2@NFIX!0.97!12.28!NFIX;;chr11:46299539..46299620,+!p2@CREB3L1!0.95!13.80!CREB3L1;;chr5:139492456..139492489,+!p7@PURA!0.95!7.98!PURA;;chr5:72744594..72744609,-!p1@FOXD1!0.93!35.46!FOXD1;;chr9:132427972..132428056,+!p1@PRRX2!0.93!10.00!PRRX2;;chr7:44143925..44143970,+!p1@AEBP1!0.90!161.58!AEBP1;;chr2:239756671..239756732,+!p1@TWIST2!0.90!23.17!TWIST2;;chr3:141087393..141087426,+!p3@ZBTB38!0.88!27.61!ZBTB38;;chr12:66218255..66218304,+!p3@HMGA2!0.88!18.49!HMGA2;;chr3:141121847..141121868,+!p5@ZBTB38!0.87!10.00!ZBTB38;;chr9:132427883..132427951,+!p2@PRRX2!0.87!6.46!PRRX2;;chr3:25470156..25470227,+!p2@RARB!0.87!6.33!RARB;;chr19:47523058..47523114,+!p1@NPAS1!0.87!6.33!NPAS1;;chr21:38071403..38071428,+!p2@SIM2!0.87!6.33!SIM2;;chr7:19157248..19157268,-!p1@TWIST1!0.86!18.11!TWIST1;;chr11:65686802..65686818,+!p6@DRAP1!0.86!11.14!DRAP1;;chr18:53068911..53068935,-!p4@TCF4!0.86!7.09!TCF4;;chr1:170632250..170632277,+!p7@PRRX1!0.86!6.20!PRRX1;;chr1:158979872..158979898,+!p3@IFI16!0.83!18.61!IFI16;;chr2:239756739..239756755,+!p2@TWIST2!0.83!10.26!TWIST2;;chr7:44143997..44144008,+!p3@AEBP1!0.82!7.22!AEBP1;;chr19:50432453..50432468,+!p1@ATF5!0.80!326.20!ATF5;;chr1:170632439..170632465,+!p11@PRRX1!0.80!5.32!PRRX1;;chr7:35293685..35293718,-!p1@TBX20!0.80!5.32!TBX20;;chr10:63809013..63809041,+!p3@ARID5B!0.77!29.88!ARID5B;;chr11:65667884..65667895,-!p2@FOSL1!0.77!20.77!FOSL1;;chr12:66218212..66218244,+!p5@HMGA2!0.77!7.47!HMGA2;;chr8:72756063..72756125,-!p1@MSC!0.76!10.13!MSC;;chr3:168864315..168864339,-!p2@MECOM!0.76!8.10!MECOM;;chr1:170632723..170632739,+!p8@PRRX1!0.76!4.81!PRRX1;;chr8:77593474..77593612,+!p1@ZFHX4!0.75!21.65!ZFHX4;;chr12:66218598..66218645,+!p2@HMGA2!0.74!22.67!HMGA2;;chr18:19749517..19749531,+!p3@GATA6!0.74!8.48!GATA6;;chr18:19749353..19749367,+!p4@GATA6!0.74!4.56!GATA6;;chr5:72743793..72743855,-!p4@FOXD1!0.73!5.19!FOXD1;;chr15:80843484..80843499,+!p5@ARNT2!0.73!4.43!ARNT2;;chr11:65686732..65686756,+!p2@DRAP1!0.72!19.75!DRAP1;;chr7:44143978..44143989,+!p2@AEBP1!0.72!8.23!AEBP1;;chr5:72744445..72744466,-!p2@FOXD1!0.71!7.34!FOXD1;;chr3:141105705..141105770,+!p4@ZBTB38!0.71!5.19!ZBTB38;;chr8:72756267..72756296,-!p4@MSC!0.70!6.20!MSC;;chr10:131762504..131762555,-!p1@EBF3!0.70!4.05!EBF3;;chr11:65687222..65687240,+!p7@DRAP1!0.69!5.19!DRAP1;;chr5:142780189..142780223,-!p6@NR3C1!0.69!3.93!NR3C1;;chr8:93074803..93074845,-!p1@RUNX1T1!0.69!3.93!RUNX1T1;;chr15:67418177..67418204,+!p9@SMAD3!0.69!3.93!SMAD3;;chr15:96869255..96869291,+!p6@NR2F2!0.68!7.47!NR2F2;;chr15:67430351..67430366,+!p10@SMAD3!0.68!3.80!SMAD3;;chr16:86600870..86600921,+!p2@FOXC2!0.68!3.80!FOXC2;;chr3:141087339..141087387,+!p2@ZBTB38!0.67!43.18!ZBTB38;;chr13:45151259..45151326,-!p2@TSC22D1!0.67!25.33!TSC22D1;;chr11:65687362..65687436,+!p3@DRAP1!0.67!19.12!DRAP1;;chr1:158979851..158979865,+!p5@IFI16!0.67!8.86!IFI16;;chr12:80085061..80085119,-!p6@PAWR!0.67!6.33!PAWR;;chr11:125034640..125034655,+!p1@PKNOX2!0.67!3.67!PKNOX2;;chr16:31076332..31076388,-!p3@ZNF668!0.67!3.67!ZNF668;;chr3:157823517..157823562,-!p1@SHOX2!0.66!3.93!SHOX2;;chr6:134210243..134210257,+!p1@TCF21!0.66!3.55!TCF21;;chr11:65687243..65687276,+!p8@DRAP1!0.65!4.94!DRAP1;;chr6:10415276..10415341,-!p2@TFAP2A!0.65!4.43!TFAP2A;;chr6:85473156..85473210,-!p2@TBX18!0.65!4.43!TBX18;;chr13:45150455..45150472,-!p8@TSC22D1!0.65!3.42!TSC22D1;;chr10:63809106..63809127,+!p1@ARID5B!0.64!54.07!ARID5B;;chr15:67418047..67418093,+!p4@SMAD3!0.64!4.43!SMAD3;;chr1:158979792..158979814,+!p2@IFI16!0.63!36.85!IFI16;;chr15:67418119..67418162,+!p5@SMAD3!0.63!3.67!SMAD3;;chr1:170633100..170633112,+!p19@PRRX1!0.63!3.29!PRRX1;;chr7:1577899..1577943,+!p3@MAFK!0.63!3.29!MAFK;;chr3:169381420..169381535,-!p1@MECOM!0.62!3.80!MECOM;;chr8:11561684..11561751,+!p1@GATA4!0.62!3.17!GATA4;;chr1:119530493..119530572,-!p1@TBX15!0.62!3.17!TBX15;;chr10:63853436..63853442,+!p4@ARID5B!0.61!19.63!ARID5B;;chr7:19157043..19157088,-!p2@TWIST1!0.61!8.74!TWIST1;;chr12:66218183..66218209,+!p4@HMGA2!0.61!6.58!HMGA2;;chr12:66218904..66218913,+!p11@HMGA2!0.61!3.04!HMGA2;;chr1:170632137..170632172,+!p10@PRRX1!0.61!3.04!PRRX1;;chr1:170633245..170633256,+!p14@PRRX1!0.61!3.04!PRRX1;;chr2:85981107..85981120,+!p3@ATOH8!0.61!3.04!ATOH8;;chr4:174451350..174451363,-!p3@HAND2!0.61!3.04!HAND2;;chr8:72755987..72756002,-!p7@MSC!0.61!3.04!MSC;;chr6:34204921..34204939,+!p3@HMGA1!0.60!108.40!HMGA1;;chr14:62162258..62162269,+!p2@HIF1A!0.60!34.82!HIF1A;;chr14:62162285..62162296,+!p3@HIF1A!0.60!18.36!HIF1A;;chr1:151032860..151032918,+!p1@MLLT11!0.59!41.66!MLLT11;;chr12:27485762..27485776,+!p3@ARNTL2!0.59!8.86!ARNTL2;;chr9:14083467..14083483,-!p4@NFIB!0.59!8.10!NFIB;;chr6:85474299..85474324,-!p1@TBX18!0.59!5.70!TBX18;;chr6:10412600..10412637,-!p1@TFAP2A!0.59!5.32!TFAP2A;;chr15:96876966..96877017,+!p12@NR2F2!0.59!4.43!NR2F2;;chr6:1389789..1389821,+!p1@FOXF2!0.59!4.31!FOXF2;;chr19:13135582..13135600,+!p3@NFIX!0.59!2.91!NFIX;;chr1:170632115..170632136,+!p9@PRRX1!0.59!2.91!PRRX1;;chr1:170632762..170632786,+!p13@PRRX1!0.59!2.91!PRRX1;;chr16:67881588..67881612,-!p2@CENPT!0.58!4.05!CENPT;;chr6:135502501..135502546,+!p1@MYB!0.58!3.55!MYB;;chr1:170632683..170632696,+!p12@PRRX1!0.58!2.79!PRRX1;;chr12:66218836..66218888,+!p1@HMGA2!0.57!31.40!HMGA2;;chr9:14082760..14082775,-!p6@NFIB!0.57!4.94!NFIB;;chr19:47922750..47922795,-!p1@MEIS3!0.57!4.94!MEIS3;;chr5:134369905..134369972,-!p1@PITX1!0.57!4.56!PITX1;;chr19:16435625..16435682,+!p1@KLF2!0.56!106.37!KLF2;;chr2:231280954..231280965,+!p2@SP100!0.56!5.45!SP100;;chr19:16435705..16435726,+!p3@KLF2!0.56!2.66!KLF2;;chr19:16435735..16435773,+!p4@KLF2!0.56!2.66!KLF2;;chr19:13106214..13106382,+!p1@NFIX!0.55!74.46!NFIX;;chr3:25469724..25469773,+!p1@RARB!0.55!4.05!RARB;;chr3:21792682..21792720,-!p1@ZNF385D!0.55!2.53!ZNF385D;;chr9:14314522..14314556,-!p3@NFIB!0.54!6.84!NFIB;;chr15:96874145..96874166,+!p7@NR2F2!0.54!5.45!NR2F2;;chr15:96869114..96869160,+!p11@NR2F2!0.54!3.67!NR2F2;;chr19:50435736..50435781,+!p3@ATF5!0.54!3.67!ATF5;;chr9:14314566..14314618,-!p1@NFIB!0.53!36.60!NFIB;;chr5:88178983..88179012,-!p1@MEF2C!0.53!23.68!MEF2C;;chr11:65686952..65686975,+!p5@DRAP1!0.53!16.34!DRAP1;;chr5:321810..321877,+!p1@AHRR!0.53!9.24!AHRR;;chr3:21792585..21792625,-!p2@ZNF385D!0.53!2.79!ZNF385D;;chr11:125034605..125034636,+!p2@PKNOX2!0.53!2.41!PKNOX2;;chr12:80085120..80085156,-!p14@PAWR!0.53!2.41!PAWR;;chr15:67430381..67430396,+!p21@SMAD3!0.53!2.41!SMAD3;;chr1:170632028..170632043,+!p20@PRRX1!0.53!2.41!PRRX1;;chr2:191878874..191878938,-!p1@STAT1!0.52!162.47!STAT1;;chr10:77161504..77161530,-!p1@ZNF503!0.52!39.89!ZNF503;;chr2:85980951..85981004,+!p1@ATOH8!0.52!4.31!ATOH8;;chr2:85981222..85981259,+!p2@ATOH8!0.52!4.31!ATOH8;;chr2:119604456..119604501,-!p2@EN1!0.52!2.28!EN1;;chr11:46333934..46333963,+!p5@CREB3L1!0.52!2.28!CREB3L1;;chr5:2751762..2751784,-!p1@IRX2!0.52!2.28!IRX2;;chr8:72756380..72756427,-!p8@MSC!0.52!2.28!MSC;;chr8:93074848..93074871,-!p3@RUNX1T1!0.52!2.28!RUNX1T1;;chr19:13136241..13136258,+!p7@NFIX!0.51!3.29!NFIX;;chr6:144329384..144329405,-!p1@PLAGL1!0.50!32.92!PLAGL1;;chr6:19837592..19837621,+!p1@ID4!0.50!16.97!ID4;;chr9:14314131..14314147,-!p2@NFIB!0.50!15.58!NFIB;;chr2:178128149..178128198,-!p2@NFE2L2!0.50!14.94!NFE2L2;;chr15:96869292..96869320,+!p15@NR2F2!0.50!3.42!NR2F2;;chr9:16705069..16705086,-!p3@BNC2!0.50!2.15!BNC2;;chr6:28321971..28321995,-!p1@ZNF323!0.50!2.15!ZNF323;;chr7:150945865..150945896,-!p4@SMARCD3!0.50!2.15!SMARCD3;;chr3:141121871..141121885,+!p13@ZBTB38!0.50!2.15!ZBTB38;;chr3:169381183..169381205,-!p4@MECOM!0.50!2.15!MECOM;;chr12:66218923..66218934,+!p14@HMGA2!0.50!2.15!HMGA2;;chr7:150945754..150945789,-!p2@SMARCD3!0.49!8.10!SMARCD3;;chr10:63809134..63809145,+!p6@ARID5B!0.49!5.83!ARID5B;;chr12:80084137..80084165,-!p10@PAWR!0.49!2.91!PAWR;;chr15:37391588..37391604,-!p11@MEIS2!0.49!2.91!MEIS2;;chr8:72756213..72756243,-!p5@MSC!0.49!2.91!MSC;;chr3:168865194..168865245,-!p3@MECOM!0.49!2.91!MECOM;;chr20:48599506..48599526,+!p1@SNAI1!0.48!17.22!SNAI1;;chr17:1959369..1959388,+!p2@HIC1!0.48!6.58!HIC1;;chr10:63809077..63809089,+!p5@ARID5B!0.48!5.32!ARID5B;;chr9:14313893..14313908,-!p7@NFIB!0.48!3.29!NFIB;;chr8:72756023..72756055,-!p6@MSC!0.48!2.66!MSC;;chr5:142780237..142780261,-!p7@NR3C1!0.48!2.03!NR3C1;;chr11:46299443..46299459,+!p4@CREB3L1!0.48!2.03!CREB3L1;;chr3:141121820..141121838,+!p9@ZBTB38!0.48!2.03!ZBTB38;;chr7:77428149..77428220,+!p1@PHTF2!0.47!26.97!PHTF2;;chr6:126102292..126102329,+!p3@NCOA7!0.47!8.23!NCOA7;;chr19:13134457..13134462,+!p5@NFIX!0.47!4.05!NFIX;;chr1:151032922..151032951,+!p2@MLLT11!0.47!3.80!MLLT11;;chr12:80085255..80085284,-!p9@PAWR!0.47!3.17!PAWR;;chr11:46299186..46299195,+!p3@CREB3L1!0.47!2.28!CREB3L1;;chr3:52001448..52001478,-!p2@PCBP4!0.46!35.96!PCBP4;;chr12:96588368..96588394,+!p3@ELK3!0.46!6.33!ELK3;;chr8:106330656..106330684,+!p1@ZFPM2!0.46!6.20!ZFPM2;;chr13:45151403..45151433,-!p5@TSC22D1!0.46!5.07!TSC22D1;;chr1:158979922..158979933,+!p13@IFI16!0.46!1.90!IFI16;;chr1:170632310..170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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000057;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002547;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000060;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000947;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001637;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001981;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004573;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0007798
 |ffid_belonging_in_development=CL:0000134
 |fonse_cell_line=

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FF:11245-116E3: Difference between revisions

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Revision as of 14:56, 15 May 2017

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0