FF:11307-117C2: Difference between revisions

Revision as of 15:02, 15 May 2017

Name:	CD8+ T Cells, donor2
Species:	Human (Homo sapiens)
Library ID:	CNhs11956
Sample type:	primary cells
Genomic View:	UCSC
FANTOM CAT:	1, 2, 3, 4, 5, 6
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	blood
dev stage	57 years old adult
sex	male
age	57
cell type	t cell, CD8+
cell line	NA
company	3HBiomedical
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	CD8T726
catalog number	3H100-26-10
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers

Method		Sample accession id
sRNA-Seq		SAMD00013692

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs11956		CAGE		DRX008196		DRR009068
sRNA-Seq		DRX012364		DRR013812

Accession ID Hg19

Library id		BAM		CTSS
CNhs11956		DRZ000493		DRZ001878
DRZ003013

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0.186
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.0559
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0.0922
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.259
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.886
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0.89
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0.186
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.624
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0.744
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.836
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.6
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0.103
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0.515
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.203
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.103
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0.217
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.51
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0.821
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0.813
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.676
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0.157
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0.497
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0.369
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.0508
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.496
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.846
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.786
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0.744
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.0194
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0.458
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0.369
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.812
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.491
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.852
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0.699
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0.145
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.87
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0.803
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0.73
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0.103
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0.723
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11956

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	3.74238e-4
MA0003.1	MA0003.1	0.335
MA0004.1	MA0004.1	0.813
MA0006.1	MA0006.1	0.333
MA0007.1	MA0007.1	0.377
MA0009.1	MA0009.1	0.0289
MA0014.1	MA0014.1	0.647
MA0017.1	MA0017.1	0.0966
MA0018.2	MA0018.2	6.87486e-9
MA0019.1	MA0019.1	0.718
MA0024.1	MA0024.1	0.685
MA0025.1	MA0025.1	0.268
MA0027.1	MA0027.1	0.667
MA0028.1	MA0028.1	0.153
MA0029.1	MA0029.1	0.617
MA0030.1	MA0030.1	0.0203
MA0031.1	MA0031.1	3.20367e-5
MA0035.2	MA0035.2	0.406
MA0038.1	MA0038.1	0.016
MA0039.2	MA0039.2	0.195
MA0040.1	MA0040.1	0.609
MA0041.1	MA0041.1	0.225
MA0042.1	MA0042.1	0.594
MA0043.1	MA0043.1	0.00373
MA0046.1	MA0046.1	0.0339
MA0047.2	MA0047.2	0.67
MA0048.1	MA0048.1	0.64
MA0050.1	MA0050.1	2.60542e-5
MA0051.1	MA0051.1	0.0907
MA0052.1	MA0052.1	0.0289
MA0055.1	MA0055.1	0.583
MA0057.1	MA0057.1	0.205
MA0058.1	MA0058.1	0.746
MA0059.1	MA0059.1	0.783
MA0060.1	MA0060.1	0.0187
MA0061.1	MA0061.1	1.36991e-10
MA0062.2	MA0062.2	1.45051e-7
MA0065.2	MA0065.2	0.881
MA0066.1	MA0066.1	0.661
MA0067.1	MA0067.1	0.00378
MA0068.1	MA0068.1	0.9
MA0069.1	MA0069.1	0.616
MA0070.1	MA0070.1	0.413
MA0071.1	MA0071.1	0.772
MA0072.1	MA0072.1	0.0797
MA0073.1	MA0073.1	0.531
MA0074.1	MA0074.1	0.963
MA0076.1	MA0076.1	0.0822
MA0077.1	MA0077.1	0.0899
MA0078.1	MA0078.1	0.974
MA0079.2	MA0079.2	0.773
MA0080.2	MA0080.2	2.18565e-8
MA0081.1	MA0081.1	0.0425
MA0083.1	MA0083.1	0.314
MA0084.1	MA0084.1	0.244
MA0087.1	MA0087.1	0.548
MA0088.1	MA0088.1	0.197
MA0090.1	MA0090.1	2.68744e-4
MA0091.1	MA0091.1	0.279
MA0092.1	MA0092.1	0.825
MA0093.1	MA0093.1	0.713
MA0099.2	MA0099.2	0.634
MA0100.1	MA0100.1	0.905
MA0101.1	MA0101.1	8.27359e-7
MA0102.2	MA0102.2	0.74
MA0103.1	MA0103.1	0.937
MA0104.2	MA0104.2	0.715
MA0105.1	MA0105.1	4.37854e-8
MA0106.1	MA0106.1	0.0722
MA0107.1	MA0107.1	2.31565e-6
MA0108.2	MA0108.2	1.03725e-4
MA0111.1	MA0111.1	0.408
MA0112.2	MA0112.2	0.288
MA0113.1	MA0113.1	0.487
MA0114.1	MA0114.1	0.18
MA0115.1	MA0115.1	0.244
MA0116.1	MA0116.1	0.114
MA0117.1	MA0117.1	0.0137
MA0119.1	MA0119.1	0.268
MA0122.1	MA0122.1	0.706
MA0124.1	MA0124.1	0.0688
MA0125.1	MA0125.1	0.068
MA0131.1	MA0131.1	0.0812
MA0135.1	MA0135.1	0.178
MA0136.1	MA0136.1	9.32993e-12
MA0137.2	MA0137.2	0.0313
MA0138.2	MA0138.2	0.0593
MA0139.1	MA0139.1	0.841
MA0140.1	MA0140.1	0.672
MA0141.1	MA0141.1	0.186
MA0142.1	MA0142.1	0.124
MA0143.1	MA0143.1	0.206
MA0144.1	MA0144.1	0.192
MA0145.1	MA0145.1	0.0234
MA0146.1	MA0146.1	0.767
MA0147.1	MA0147.1	0.638
MA0148.1	MA0148.1	1
MA0149.1	MA0149.1	0.61
MA0150.1	MA0150.1	0.286
MA0152.1	MA0152.1	0.00132
MA0153.1	MA0153.1	0.144
MA0154.1	MA0154.1	0.779
MA0155.1	MA0155.1	0.182
MA0156.1	MA0156.1	2.59997e-7
MA0157.1	MA0157.1	0.00238
MA0159.1	MA0159.1	0.989
MA0160.1	MA0160.1	0.651
MA0162.1	MA0162.1	0.355
MA0163.1	MA0163.1	0.0205
MA0164.1	MA0164.1	0.592
MA0258.1	MA0258.1	0.964
MA0259.1	MA0259.1	0.767

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11956

Novel motif	Logo	P-value
1	1	0.954
10	10	0.00619
100	100	0.735
101	101	0.186
102	102	0.774
103	103	0.28
104	104	0.929
105	105	0.91
106	106	0.124
107	107	0.0632
108	108	0.749
109	109	0.986
11	11	0.74
110	110	0.36
111	111	0.476
112	112	0.802
113	113	0.26
114	114	0.701
115	115	0.566
116	116	0.192
117	117	0.0079
118	118	0.537
119	119	0.585
12	12	0.78
120	120	0.253
121	121	0.601
122	122	0.727
123	123	3.68154e-6
124	124	0.972
125	125	0.901
126	126	0.702
127	127	0.397
128	128	0.772
129	129	0.155
13	13	0.672
130	130	0.146
131	131	0.228
132	132	0.284
133	133	0.816
134	134	0.676
135	135	0.185
136	136	0.739
137	137	0.0626
138	138	0.69
139	139	0.102
14	14	0.492
140	140	0.799
141	141	0.948
142	142	0.326
143	143	0.0338
144	144	0.997
145	145	0.499
146	146	0.361
147	147	0.0418
148	148	0.259
149	149	0.216
15	15	0.456
150	150	0.828
151	151	0.496
152	152	0.917
153	153	0.404
154	154	0.0813
155	155	0.0925
156	156	0.909
157	157	0.726
158	158	0.0109
159	159	0.881
16	16	0.229
160	160	0.0671
161	161	0.676
162	162	0.0589
163	163	0.651
164	164	0.055
165	165	0.866
166	166	0.544
167	167	0.121
168	168	0.41
169	169	0.282
17	17	0.548
18	18	0.762
19	19	0.0616
2	2	0.188
20	20	0.142
21	21	0.999
22	22	0.146
23	23	0.732
24	24	0.379
25	25	0.238
26	26	0.996
27	27	0.461
28	28	0.308
29	29	0.0953
3	3	0.588
30	30	0.0358
31	31	0.564
32	32	0.0373
33	33	0.593
34	34	0.251
35	35	0.342
36	36	0.187
37	37	0.359
38	38	0.598
39	39	0.509
4	4	0.8
40	40	0.803
41	41	0.237
42	42	0.4
43	43	0.618
44	44	0.605
45	45	0.101
46	46	0.912
47	47	0.763
48	48	0.941
49	49	0.185
5	5	0.832
50	50	0.435
51	51	0.977
52	52	0.958
53	53	0.243
54	54	0.945
55	55	0.847
56	56	0.726
57	57	0.977
58	58	0.21
59	59	0.219
6	6	0.909
60	60	0.607
61	61	0.282
62	62	0.369
63	63	0.827
64	64	0.986
65	65	0.534
66	66	0.318
67	67	0.475
68	68	0.851
69	69	0.873
7	7	0.842
70	70	0.2
71	71	0.265
72	72	0.594
73	73	0.498
74	74	0.545
75	75	0.0558
76	76	0.0946
77	77	0.00272
78	78	0.724
79	79	0.586
8	8	0.302
80	80	0.173
81	81	0.906
82	82	0.667
83	83	0.782
84	84	0.115
85	85	0.665
86	86	0.0384
87	87	0.957
88	88	0.947
89	89	0.00157
9	9	0.579
90	90	0.664
91	91	0.791
92	92	0.909
93	93	0.958
94	94	0.325
95	95	0.203
96	96	0.792
97	97	0.214
98	98	0.529
99	99	8.09635e-6

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11956

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000030 CD8-positive T cell sample
FF:0000210 human sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000791 (mature alpha-beta T cell)
0000084 (T cell)
0000789 (alpha-beta T cell)
0002419 (mature T cell)
0000625 (CD8-positive, alpha-beta T cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000030 (CD8-positive T cell sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)
CL:0000790 (immature alpha-beta T cell)

@@ Line 13: / Line 13: @@
 |def=
 |expression_enrichment_score=chr1:25256756..25256774,-!p1@RUNX3!2.51!583.55!RUNX3;;chr2:192015701..192015743,-!p1@STAT4!2.16!193.63!STAT4;;chr2:157189180..157189290,-!p1@NR4A2!2.12!638.65!NR4A2;;chr19:45971246..45971265,+!p1@FOSB!2.10!2160.38!FOSB;;chr17:45810594..45810608,+!p1@TBX21!2.07!117.14!TBX21;;chr20:50159198..50159299,-!p1@NFATC2!2.01!143.88!NFATC2;;chr1:26697243..26697258,-!p1@ZNF683!1.99!97.35!ZNF683;;chr9:102584262..102584276,+!p1@NR4A3!1.98!204.32!NR4A3;;chr10:8096631..8096660,+!p1@GATA3!1.97!111.26!GATA3;;chr9:117150254..117150271,-!p1@AKNA!1.93!220.37!AKNA;;chr19:54058073..54058088,+!p1@ZNF331!1.88!75.15!ZNF331;;chr10:8096772..8096787,+!p2@GATA3!1.87!85.31!GATA3;;chr14:75745523..75745537,+!p1@FOS!1.85!7735.44!FOS;;chr14:75746722..75746777,+!p2@FOS!1.82!81.84!FOS;;chr19:54041669..54041697,+!p2@ZNF331!1.82!65.79!ZNF331;;chr15:60884706..60884743,-!p1@RORA!1.80!301.94!RORA;;chr7:50343634..50343717,+!p2@IKZF1!1.78!59.10!IKZF1;;chr2:231090433..231090469,+!p1@SP140!1.71!50.81!SP140;;chrX:106960285..106960299,-!p1@TSC22D3!1.68!1170.59!TSC22D3;;chr17:38020392..38020477,-!p1@IKZF3!1.68!47.07!IKZF3;;chr5:133450365..133450444,+!p1@TCF7!1.65!188.81!TCF7;;chr20:56195474..56195506,-!p1@ZBP1!1.65!43.86!ZBP1;;chr3:39195075..39195088,-!p1@CSRNP1!1.64!257.54!CSRNP1;;chr2:145271342..145271377,-!p5@ZEB2!1.64!43.06!ZEB2;;chr2:192015677..192015691,-!p3@STAT4!1.64!42.52!STAT4;;chr18:46475696..46475713,-!p1@SMAD7!1.63!46.53!SMAD7;;chr6:106546808..106546833,+!p3@PRDM1!1.62!50.81!PRDM1;;chr1:26697189..26697205,-!p2@ZNF683!1.62!40.92!ZNF683;;chr9:3525727..3525828,-!p2@RFX3!1.61!97.62!RFX3;;chr9:102584241..102584261,+!p4@NR4A3!1.61!61.24!NR4A3;;chr12:72056800..72056834,+!p1@THAP2!1.60!51.35!THAP2;;chr3:27763807..27763822,-!p1@EOMES!1.60!38.78!EOMES;;chr10:35484053..35484076,+!p1@CREM!1.59!92.00!CREM;;chr8:123793988..123794016,+!p1@ZHX2!1.58!64.19!ZHX2;;chrY:21906594..21906622,-!p1@KDM5D!1.58!36.91!KDM5D;;chr19:19729477..19729542,-!p1@PBX4!1.57!74.62!PBX4;;chr19:16435625..16435682,+!p1@KLF2!1.55!1048.90!KLF2;;chr1:59249688..59249703,-!p3@JUN!1.55!197.64!JUN;;chr3:63953435..63953499,+!p1@ATXN7!1.55!34.23!ATXN7;;chr2:61108878..61108891,+!p5@REL!1.54!33.43!REL;;chr10:3824332..3824425,-!p4@KLF6!1.52!50.55!KLF6;;chr14:64971288..64971316,-!p2@ZBTB25!1.51!94.94!ZBTB25;;chr9:102584128..102584144,+!p3@NR4A3!1.50!57.77!NR4A3;;chr1:25291475..25291511,-!p2@RUNX3!1.49!30.22!RUNX3;;chr3:5020939..5020952,+!p2@BHLHE40!1.46!84.24!BHLHE40;;chrX:106960221..106960236,-!p3@TSC22D3!1.46!74.62!TSC22D3;;chr2:192015750..192015793,-!p2@STAT4!1.45!36.64!STAT4;;chr2:43453734..43453751,-!p1@ZFP36L2!1.44!2696.60!ZFP36L2;;chr1:59249707..59249727,-!p1@JUN!1.43!1047.30!JUN;;chr3:23986824..23986848,+!p2@NR1D2!1.43!139.07!NR1D2;;chr7:104654690..104654704,+!p2@MLL5!1.43!51.08!MLL5;;chr4:103422499..103422632,+!p1@NFKB1!1.42!503.86!NFKB1;;chr6:91006518..91006570,-!p1@BACH2!1.42!57.50!BACH2;;chr7:104654718..104654741,+!p3@MLL5!1.42!36.64!MLL5;;chr4:57522166..57522260,-!p2@HOPX!1.42!28.88!HOPX;;chr2:231090471..231090504,+!p2@SP140!1.42!25.41!SP140;;chr4:57522674..57522699,-!p5@HOPX!1.42!25.14!HOPX;;chr14:35873947..35873965,-!p1@NFKBIA!1.41!1497.67!NFKBIA;;chrX:106960180..106960197,-!p2@TSC22D3!1.41!91.20!TSC22D3;;chr8:67525443..67525459,-!p2@MYBL1!1.40!35.57!MYBL1;;chr9:102584278..102584285,+!p5@NR4A3!1.40!24.34!NR4A3;;chr5:133451294..133451310,+!p2@TCF7!1.39!23.53!TCF7;;chr2:61108695..61108753,+!p1@REL!1.38!152.44!REL;;chr17:37934365..37934387,-!p2@IKZF3!1.38!23.00!IKZF3;;chr19:54041645..54041661,+!p5@ZNF331!1.38!23.00!ZNF331;;chr12:51158359..51158395,+!p4@ATF1!1.38!22.73!ATF1;;chr5:131826457..131826514,-!p1@IRF1!1.37!839.49!IRF1;;chr14:35872453..35872485,-!p2@NFKBIA!1.37!54.02!NFKBIA;;chr13:74707894..74707947,-!p6@KLF12!1.37!25.14!KLF12;;chr7:50343895..50343936,+!p5@IKZF1!1.37!22.46!IKZF1;;chr6:391743..391759,+!p1@IRF4!1.37!22.20!IRF4;;chr17:38497662..38497713,+!p4@RARA!1.35!24.60!RARA;;chr2:61108808..61108821,+!p3@REL!1.34!26.48!REL;;chr2:97202480..97202499,+!p1@ARID5A!1.31!189.88!ARID5A;;chr2:208394817..208394834,+!p3@CREB1!1.31!76.49!CREB1;;chr20:44600199..44600219,-!p3@ZNF335!1.28!24.07!ZNF335;;chr8:81397820..81397836,+!p2@ZBTB10!1.28!22.46!ZBTB10;;chr1:37940170..37940190,+!p1@ZC3H12A!1.27!210.74!ZC3H12A;;chr12:72056773..72056796,+!p3@THAP2!1.27!23.00!THAP2;;chr6:106546834..106546850,+!p4@PRDM1!1.26!17.38!PRDM1;;chr19:12902289..12902307,+!p1@JUNB!1.25!3755.13!JUNB;;chr11:67007548..67007610,+!p3@KDM2A!1.25!121.69!KDM2A;;chr10:35416142..35416169,+!p3@CREM!1.25!44.40!CREM;;chr3:39195037..39195069,-!p2@CSRNP1!1.24!101.09!CSRNP1;;chr8:81397846..81397860,+!p3@ZBTB10!1.24!20.59!ZBTB10;;chr1:25256175..25256228,-!p5@RUNX3!1.24!16.31!RUNX3;;chr1:10754477..10754517,-!p1@CASZ1!1.23!26.48!CASZ1;;chr16:89789271..89789291,+!p5@ZNF276!1.23!16.05!ZNF276;;chr4:38665769..38665801,+!p2@KLF3!1.22!139.60!KLF3;;chr3:39195139..39195150,-!p3@CSRNP1!1.22!19.79!CSRNP1;;chr2:157186630..157186686,-!p6@NR4A2!1.22!15.51!NR4A2;;chr14:35874077..35874091,-!p8@NFKBIA!1.22!15.51!NFKBIA;;chr3:18486354..18486377,-!p2@SATB1!1.21!18.99!SATB1;;chr21:36421347..36421380,-!p8@RUNX1!1.21!15.24!RUNX1;;chr9:102584159..102584174,+!p2@NR4A3!1.20!26.48!NR4A3;;chr8:81397876..81397898,+!p5@ZBTB10!1.20!17.38!ZBTB10;;chr17:38020557..38020572,-!p4@IKZF3!1.20!14.98!IKZF3;;chr2:97202991..97203043,+!p3@ARID5A!1.20!14.98!ARID5A;;chr4:57522598..57522664,-!p3@HOPX!1.20!14.71!HOPX;;chr7:17338324..17338341,+!p3@AHR!1.19!47.87!AHR;;chr10:3827389..3827408,-!p1@KLF6!1.18!1054.52!KLF6;;chr2:145277640..145277771,-!p1@ZEB2!1.18!184.80!ZEB2;;chr1:59249645..59249656,-!p4@JUN!1.18!35.84!JUN;;chr4:149365827..149365870,-!p5@NR3C2!1.18!14.17!NR3C2;;chr14:99738138..99738163,-!p1@BCL11B!1.18!14.17!BCL11B;;chr10:35484090..35484104,+!p6@CREM!1.17!13.91!CREM;;chr18:46477458..46477479,-!p4@SMAD7!1.17!13.64!SMAD7;;chrX:106960249..106960260,-!p5@TSC22D3!1.16!21.13!TSC22D3;;chr7:106809470..106809481,+!p2@HBP1!1.16!18.99!HBP1;;chr3:71542684..71542720,-!p18@FOXP1!1.16!13.37!FOXP1;;chr13:74708029..74708077,-!p2@KLF12!1.15!37.71!KLF12;;chr14:75746781..75746799,+!p6@FOS!1.15!13.10!FOS;;chr8:123793252..123793266,+!p10@ZHX2!1.15!13.10!ZHX2;;chr14:64971461..64971542,+!p1@ZBTB1!1.14!257.01!ZBTB1;;chr10:104154246..104154347,+!p3@NFKB2!1.14!77.29!NFKB2;;chr12:72056749..72056767,+!p6@THAP2!1.14!14.17!THAP2;;chr1:91487774..91487802,-!p2@ZNF644!1.12!32.63!ZNF644;;chr4:103498623..103498650,+!p9@NFKB1!1.12!12.30!NFKB1;;chr10:8097321..8097348,+!p4@GATA3!1.12!12.30!GATA3;;chr14:75747250..75747267,+!p5@FOS!1.12!12.30!FOS;;chr15:31619140..31619152,+!p11@KLF13!1.12!12.30!KLF13;;chr7:50344251..50344288,+!p3@IKZF1!1.12!12.03!IKZF1;;chr15:60884747..60884774,-!p3@RORA!1.11!29.15!RORA;;chr3:150126904..150126958,+!p7@TSC22D2!1.11!20.86!TSC22D2;;chr11:85375237..85375277,-!p4@CREBZF!1.11!13.64!CREBZF;;chr20:56195525..56195556,-!p2@ZBP1!1.11!11.77!ZBP1;;chr2:157189617..157189667,-!p4@NR4A2!1.11!11.77!NR4A2;;chr8:41909982..41910009,-!p2@KAT6A!1.10!13.10!KAT6A;;chr15:31619326..31619390,+!p2@KLF13!1.09!129.44!KLF13;;chr19:12721790..12721810,+!p2@ZNF791!1.09!31.56!ZNF791;;chr8:60031619..60031676,-!p1@TOX!1.09!24.34!TOX;;chr5:142782823..142782854,-!p3@NR3C1!1.09!16.31!NR3C1;;chr19:54041603..54041615,+!p10@ZNF331!1.09!11.23!ZNF331;;chr11:13299319..13299424,+!p1@ARNTL!1.08!111.52!ARNTL;;chr14:35872962..35873025,-!p3@NFKBIA!1.08!28.08!NFKBIA;;chr1:45805693..45805718,+!p3@TOE1!1.08!24.07!TOE1;;chr14:35872926..35872951,-!p4@NFKBIA!1.08!15.51!NFKBIA;;chr7:127032330..127032356,-!p3@ZNF800!1.08!14.17!ZNF800;;chr8:102218439..102218455,-!p3@ZNF706!1.08!10.97!ZNF706;;chr8:103668114..103668134,-!p5@KLF10!1.08!10.97!KLF10;;chr14:75747296..75747329,+!p4@FOS!1.08!10.97!FOS;;chr19:45504688..45504782,+!p1@RELB!1.07!65.52!RELB;;chr8:67525473..67525518,-!p1@MYBL1!1.07!24.87!MYBL1;;chr15:57211634..57211657,+!p5@TCF12!1.07!16.58!TCF12;;chr14:75988831..75988847,+!p2@BATF!1.07!10.70!BATF;;chr17:45810816..45810838,+!p2@TBX21!1.07!10.70!TBX21;;chr2:68592394..68592405,+!p2@PLEK!1.07!10.70!PLEK;;chr19:54041574..54041589,+!p6@ZNF331!1.07!10.70!ZNF331;;chr1:92951607..92951661,-!p1@GFI1!1.07!10.70!GFI1;;chr19:45972701..45972774,+!p2@FOSB!1.06!14.44!FOSB;;chr10:3827371..3827386,-!p2@KLF6!1.05!86.65!KLF6;;chr13:41240717..41240735,-!p2@FOXO1!1.05!70.07!FOXO1;;chr11:67007611..67007622,+!p6@KDM2A!1.05!13.64!KDM2A;;chr10:135121763..135121783,+!p5@ZNF511!1.05!10.16!ZNF511;;chr8:123794038..123794056,+!p5@ZHX2!1.05!10.16!ZHX2;;chr19:45977697..45977713,+!p4@FOSB!1.05!10.16!FOSB;;chr11:67007477..67007493,+!p2@KDM2A!1.04!86.12!KDM2A;;chr17:40440481..40440550,+!p1@STAT5A!1.04!72.48!STAT5A;;chr3:23986876..23986885,+!p4@NR1D2!1.04!14.17!NR1D2;;chr10:35416223..35416234,+!p12@CREM!1.04!9.90!CREM;;chr7:50344289..50344323,+!p1@IKZF1!1.04!9.90!IKZF1;;chr11:128392085..128392232,-!p1@ETS1!1.03!331.09!ETS1;;chr1:153895251..153895342,-!p2@GATAD2B!1.03!36.10!GATAD2B;;chr2:174828545..174828644,-!p1@SP3!1.02!146.82!SP3;;chr1:59249732..59249749,-!p2@JUN!1.02!115.53!JUN;;chr2:28616358..28616380,+!p3@FOSL2!1.02!50.28!FOSL2;;chr3:71542651..71542683,-!p22@FOXP1!1.02!9.36!FOXP1;;chr14:99737850..99737852,-!p3@BCL11B!1.02!9.36!BCL11B;;chr19:16435735..16435773,+!p4@KLF2!1.02!9.36!KLF2;;chr19:18392422..18392440,-!p1@JUND!1.01!1292.81!JUND;;chr3:5021113..5021180,+!p1@BHLHE40!1.01!652.55!BHLHE40;;chr6:91006575..91006602,-!p2@BACH2!1.01!13.91!BACH2;;chr14:35872494..35872511,-!p5@NFKBIA!1.01!12.30!NFKBIA;;chr3:63898321..63898396,+!p3@ATXN7!1.00!20.86!ATXN7;;chr19:18391593..18391611,-!p6@JUND!1.00!14.98!JUND;;chr6:106546786..106546802,+!p6@PRDM1!1.00!9.09!PRDM1;;chr14:90085458..90085557,-!p1@FOXN3!0.99!93.87!FOXN3;;chr14:74353454..74353469,+!p4@ZNF410!0.99!17.12!ZNF410;;chr15:31619407..31619419,+!p9@KLF13!0.99!10.97!KLF13;;chr14:69262947..69262986,-!p3@ZFP36L1!0.99!10.70!ZFP36L1;;chr17:38020516..38020544,-!p5@IKZF3!0.99!8.83!IKZF3;;chr3:71542615..71542644,-!p12@FOXP1!0.99!8.83!FOXP1;;chr9:129567282..129567353,+!p1@ZBTB43!0.98!115.80!ZBTB43;;chr9:32550839..32550962,-!p3@TOPORS!0.98!21.66!TOPORS;;chr17:36861675..36861697,+!p3@MLLT6!0.98!20.33!ML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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000084;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000542;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000625;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000789;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988
 |ffid_belonging_in_development=CL:0000134,CL:0000051,CL:0000790
 |fonse_cell_line=

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FF:11307-117C2: Difference between revisions

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Revision as of 15:02, 15 May 2017

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0