FFCP PHASE1:Hg19::chr20:43538744..43538755,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=80336 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=15797 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q4VY17 | ||
|association_with_transcript=-9bp_to_ENST00000537323_5end | |association_with_transcript=-9bp_to_ENST00000537323_5end | ||
|cluster_id=chr20:43538744..43538755,+ | |cluster_id=chr20:43538744..43538755,+ |
Latest revision as of 08:53, 16 September 2015
Short description: | p3@PABPC1L |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PABPC1L_5end |
Coexpression cluster: | C4040_testicular_granulocyte_hepatoblastoma_somatostatinoma_smallcell_tubular_extraskeletal |
Association with transcript: | -9bp_to_ENST00000537323_5end |
EntrezGene: | PABPC1L |
HGNC: | 15797 |
UniProt: | Q4VY17 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@PABPC1L |
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0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.46e-12 | 7 |
germ cell | 2.46e-12 | 7 |
embryonic stem cell | 3.10e-11 | 5 |
endodermal cell | 2.93e-10 | 58 |
epithelial cell of pancreas | 7.12e-10 | 4 |
epithelial cell | 7.10e-09 | 253 |
epithelial cell of stomach | 2.31e-07 | 3 |
Showing 1 to 7 of 7 entries
Ontology term | p-value | n |
---|---|---|
pancreas | 6.39e-11 | 10 |
viscus | 4.38e-07 | 18 |
endocrine system | 8.29e-07 | 45 |
body cavity | 8.95e-07 | 46 |
Showing 1 to 4 of 4 entries
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.89e-21 | 106 |
cell type cancer | 7.75e-21 | 143 |
cancer | 5.16e-12 | 235 |
disease of cellular proliferation | 1.68e-11 | 239 |
germ cell and embryonal cancer | 5.06e-11 | 22 |
germ cell cancer | 5.06e-11 | 22 |
pancreatic cancer | 7.12e-10 | 4 |
disease of anatomical entity | 1.02e-07 | 39 |
Showing 1 to 8 of 8 entries