FFCP PHASE2:Hg19::chr6:11111950..11111959,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:405754 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:33823 |TSScl...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=405754 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=33823 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 19:56, 19 September 2015
Short description: | p1@ERVFRD-1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ERVFRD-1_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 0bp_to_uc003mzt.2_5end |
EntrezGene: | ERVFRD-1 |
HGNC: | 33823 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@ERVFRD-1 |
---|
0
500
1000
1500
2000
2500
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 8.62e-37 | 5 |
basophil mast progenitor cell | 8.62e-37 | 5 |
endocrine cell | 3.42e-29 | 9 |
glomerular endothelial cell | 2.41e-13 | 5 |
lymphangioblast | 2.48e-11 | 6 |
endothelial cell of lymphatic vessel | 2.48e-11 | 6 |
vascular lymphangioblast | 2.48e-11 | 6 |
retinal pigment epithelial cell | 8.67e-11 | 3 |
lining cell | 1.25e-10 | 58 |
barrier cell | 1.25e-10 | 58 |
Showing 1 to 10 of 16 entries
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 8.67e-11 | 3 |
presumptive retinal pigmented epithelium | 8.67e-11 | 3 |
primitive nephron | 1.11e-09 | 7 |
renal glomerulus | 1.11e-09 | 7 |
renal corpuscle | 1.11e-09 | 7 |
glomerular capsule | 1.11e-09 | 7 |
metanephric mesenchyme | 1.11e-09 | 7 |
glomerular tuft | 1.11e-09 | 7 |
S-shaped body | 1.11e-09 | 7 |
renal vesicle | 1.11e-09 | 7 |
Showing 1 to 10 of 30 entries