FF:10774-110F9: Difference between revisions

Revision as of 19:50, 9 July 2012

Name:	neuroectodermal tumor cell line:TASK1
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	thorax
dev stage	NA
sex	female
age	21
cell type	unclassifiable
cell line	TASK1
company	JAPAN HEALTH SCIENCES FOUNDATION - Health Science Research Resources Bank
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.114
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.444
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.085
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.0796
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.171
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0.179
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.148
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0.0441
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.442
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.0068
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.0508
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.504
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.0681
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.225
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0.0681
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0.127
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11866

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.003
MA0003.1	MA0003.1	0.316
MA0004.1	MA0004.1	0.0563
MA0006.1	MA0006.1	0.0545
MA0007.1	MA0007.1	0.413
MA0009.1	MA0009.1	0.334
MA0014.1	MA0014.1	0.72
MA0017.1	MA0017.1	0.106
MA0018.2	MA0018.2	0.37
MA0019.1	MA0019.1	0.012
MA0024.1	MA0024.1	1.90084e-8
MA0025.1	MA0025.1	0.255
MA0027.1	MA0027.1	0.22
MA0028.1	MA0028.1	8.27716e-4
MA0029.1	MA0029.1	0.878
MA0030.1	MA0030.1	0.125
MA0031.1	MA0031.1	0.412
MA0035.2	MA0035.2	0.561
MA0038.1	MA0038.1	0.0527
MA0039.2	MA0039.2	0.653
MA0040.1	MA0040.1	0.214
MA0041.1	MA0041.1	0.224
MA0042.1	MA0042.1	0.466
MA0043.1	MA0043.1	0.723
MA0046.1	MA0046.1	0.293
MA0047.2	MA0047.2	0.507
MA0048.1	MA0048.1	0.0492
MA0050.1	MA0050.1	7.7863e-10
MA0051.1	MA0051.1	7.55975e-5
MA0052.1	MA0052.1	0.0147
MA0055.1	MA0055.1	3.83195e-4
MA0057.1	MA0057.1	0.606
MA0058.1	MA0058.1	0.029
MA0059.1	MA0059.1	0.0039
MA0060.1	MA0060.1	2.59273e-9
MA0061.1	MA0061.1	0.0189
MA0062.2	MA0062.2	0.00123
MA0065.2	MA0065.2	0.523
MA0066.1	MA0066.1	0.382
MA0067.1	MA0067.1	0.92
MA0068.1	MA0068.1	0.0397
MA0069.1	MA0069.1	0.926
MA0070.1	MA0070.1	0.709
MA0071.1	MA0071.1	0.614
MA0072.1	MA0072.1	0.99
MA0073.1	MA0073.1	0.126
MA0074.1	MA0074.1	0.478
MA0076.1	MA0076.1	7.0469e-5
MA0077.1	MA0077.1	0.528
MA0078.1	MA0078.1	0.513
MA0079.2	MA0079.2	0.102
MA0080.2	MA0080.2	4.96672e-10
MA0081.1	MA0081.1	0.124
MA0083.1	MA0083.1	3.56728e-5
MA0084.1	MA0084.1	0.302
MA0087.1	MA0087.1	0.327
MA0088.1	MA0088.1	2.46323e-4
MA0090.1	MA0090.1	0.173
MA0091.1	MA0091.1	0.376
MA0092.1	MA0092.1	0.478
MA0093.1	MA0093.1	0.0444
MA0099.2	MA0099.2	1.1205e-16
MA0100.1	MA0100.1	0.582
MA0101.1	MA0101.1	0.011
MA0102.2	MA0102.2	0.00419
MA0103.1	MA0103.1	0.9
MA0104.2	MA0104.2	3.25098e-4
MA0105.1	MA0105.1	0.579
MA0106.1	MA0106.1	0.877
MA0107.1	MA0107.1	0.00185
MA0108.2	MA0108.2	2.38491e-4
MA0111.1	MA0111.1	0.722
MA0112.2	MA0112.2	0.00839
MA0113.1	MA0113.1	0.42
MA0114.1	MA0114.1	0.698
MA0115.1	MA0115.1	0.843
MA0116.1	MA0116.1	0.606
MA0117.1	MA0117.1	0.983
MA0119.1	MA0119.1	0.251
MA0122.1	MA0122.1	0.619
MA0124.1	MA0124.1	0.236
MA0125.1	MA0125.1	0.705
MA0131.1	MA0131.1	0.188
MA0135.1	MA0135.1	0.037
MA0136.1	MA0136.1	4.73959e-6
MA0137.2	MA0137.2	0.0324
MA0138.2	MA0138.2	0.557
MA0139.1	MA0139.1	0.945
MA0140.1	MA0140.1	0.762
MA0141.1	MA0141.1	0.99
MA0142.1	MA0142.1	0.982
MA0143.1	MA0143.1	0.327
MA0144.1	MA0144.1	0.00301
MA0145.1	MA0145.1	0.00205
MA0146.1	MA0146.1	0.989
MA0147.1	MA0147.1	7.31634e-5
MA0148.1	MA0148.1	0.474
MA0149.1	MA0149.1	4.80459e-5
MA0150.1	MA0150.1	2.10988e-4
MA0152.1	MA0152.1	0.881
MA0153.1	MA0153.1	0.0383
MA0154.1	MA0154.1	0.321
MA0155.1	MA0155.1	0.369
MA0156.1	MA0156.1	0.0626
MA0157.1	MA0157.1	0.513
MA0159.1	MA0159.1	0.139
MA0160.1	MA0160.1	0.414
MA0162.1	MA0162.1	0.381
MA0163.1	MA0163.1	0.0389
MA0164.1	MA0164.1	0.68
MA0258.1	MA0258.1	0.262
MA0259.1	MA0259.1	0.00844

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11866

Novel motif	Logo	P-value
1	1	0.185
10	10	0.367
100	100	0.0667
101	101	0.501
102	102	0.836
103	103	0.0685
104	104	0.641
105	105	0.567
106	106	1.84871e-4
107	107	0.0266
108	108	0.699
109	109	0.703
11	11	0.741
110	110	0.419
111	111	0.549
112	112	0.167
113	113	0.172
114	114	0.0576
115	115	0.319
116	116	0.372
117	117	0.318
118	118	0.447
119	119	0.489
12	12	0.814
120	120	0.962
121	121	0.715
122	122	0.786
123	123	9.44134e-4
124	124	0.687
125	125	0.766
126	126	0.59
127	127	0.379
128	128	0.0332
129	129	0.722
13	13	0.0672
130	130	0.401
131	131	0.147
132	132	0.524
133	133	0.321
134	134	0.372
135	135	0.0589
136	136	0.868
137	137	0.0661
138	138	0.964
139	139	0.82
14	14	0.397
140	140	0.572
141	141	0.387
142	142	0.678
143	143	0.0437
144	144	0.807
145	145	0.877
146	146	0.89
147	147	0.756
148	148	0.165
149	149	0.369
15	15	0.913
150	150	0.578
151	151	0.33
152	152	0.00507
153	153	0.955
154	154	0.477
155	155	0.678
156	156	0.825
157	157	0.852
158	158	0.264
159	159	0.123
16	16	0.345
160	160	0.426
161	161	0.761
162	162	0.545
163	163	0.0543
164	164	0.135
165	165	0.559
166	166	0.971
167	167	0.111
168	168	0.0872
169	169	0.13
17	17	0.518
18	18	0.283
19	19	0.134
2	2	0.0126
20	20	0.331
21	21	0.75
22	22	0.16
23	23	3.84795e-4
24	24	0.66
25	25	0.897
26	26	0.677
27	27	0.234
28	28	0.986
29	29	0.508
3	3	0.554
30	30	0.183
31	31	0.555
32	32	0.0514
33	33	0.958
34	34	0.285
35	35	0.598
36	36	0.072
37	37	0.272
38	38	0.771
39	39	0.398
4	4	0.739
40	40	0.265
41	41	0.147
42	42	0.254
43	43	0.261
44	44	0.719
45	45	0.302
46	46	0.622
47	47	0.317
48	48	0.266
49	49	0.875
5	5	0.45
50	50	0.957
51	51	0.799
52	52	0.0526
53	53	0.397
54	54	0.48
55	55	0.24
56	56	0.558
57	57	0.124
58	58	0.557
59	59	0.0369
6	6	0.148
60	60	0.027
61	61	0.825
62	62	0.213
63	63	0.885
64	64	0.298
65	65	0.304
66	66	0.291
67	67	0.644
68	68	0.737
69	69	0.654
7	7	0.51
70	70	0.149
71	71	0.983
72	72	0.225
73	73	0.0376
74	74	0.543
75	75	0.338
76	76	0.231
77	77	0.228
78	78	0.359
79	79	0.131
8	8	0.484
80	80	0.061
81	81	0.993
82	82	0.484
83	83	0.924
84	84	0.538
85	85	0.00357
86	86	0.372
87	87	0.998
88	88	0.601
89	89	0.138
9	9	0.0705
90	90	0.142
91	91	0.3
92	92	0.188
93	93	0.973
94	94	0.606
95	95	0.839
96	96	0.629
97	97	0.538
98	98	0.815
99	99	0.604

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11866

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
DOID:171 neuroectodermal tumor
EFO:0002091 biological replicate
FF:0000003 cell line sample
FF:0000210 human sample
UBERON:0002346 neurectoderm

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
171 (neuroectodermal tumor)
3095 (germ cell and embryonal cancer)
2994 (germ cell cancer)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0000479 (tissue)
0002346 (neurectoderm)
0004121 (ectoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000923 (germ layer)
0002050 (embryonic structure)
0005423 (developing anatomical structure)
0001062 (anatomical entity)
0010316 (germ layer / neural crest)
0005291 (embryonic tissue)
0010317 (germ layer / neural crest derived structure)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chrX:25034067..25034088,-!p1@ARX!2.32!210.13!ARX;;chr3:128212033..128212051,-!p1@GATA2!1.87!72.98!GATA2;;chrX:30327504..30327509,-!p1@NR0B1!1.84!67.55!NR0B1;;chr7:19157248..19157268,-!p1@TWIST1!1.78!156.66!TWIST1;;chr20:42574529..42574563,+!p3@TOX2!1.76!56.86!TOX2;;chr14:57277178..57277203,-!p1@OTX2!1.73!52.79!OTX2;;chr6:50786591..50786614,+!p1@TFAP2B!1.72!51.43!TFAP2B;;chr14:76842457..76842494,+!p1@ESRRB!1.60!38.36!ESRRB;;chr1:25256756..25256774,-!p1@RUNX3!1.51!57.20!RUNX3;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.45!27.16!ZBED1;;chr2:5832508..5832524,+!p1@SOX11!1.43!26.14!SOX11;;chr15:57511609..57511651,+!p2@TCF12!1.42!42.09!TCF12;;chr6:50789717..50789729,+!p4@TFAP2B!1.42!25.46!TFAP2B;;chr2:176969228..176969260,+!p1@HOXD11!1.39!23.59!HOXD11;;chr13:100634031..100634045,+!p1@ZIC2!1.38!23.25!ZIC2;;chr3:128206762..128206781,-!p2@GATA2!1.37!135.45!GATA2;;chr2:176957443..176957457,+!p1@HOXD13!1.35!21.39!HOXD13;;chr13:100623375..100623425,-!p1@ZIC5!1.33!20.54!ZIC5;;chr7:121944796..121944814,-!p1@FEZF1!1.31!19.52!FEZF1;;chr1:18957333..18957375,+!p1@PAX7!1.27!17.65!PAX7;;chr6:50786571..50786590,+!p2@TFAP2B!1.26!17.31!TFAP2B;;chr3:181429704..181429722,+!p1@SOX2!1.25!16.97!SOX2;;chr10:131762504..131762555,-!p1@EBF3!1.23!16.12!EBF3;;chr6:50786509..50786527,+!p5@TFAP2B!1.21!15.28!TFAP2B;;chr1:18958008..18958023,+!p2@PAX7!1.19!14.60!PAX7;;chr11:16629369..16629392,-!p5@SOX6!1.18!14.09!SOX6;;chr6:50786547..50786564,+!p3@TFAP2B!1.17!13.92!TFAP2B;;chr14:99738138..99738163,-!p1@BCL11B!1.15!13.24!BCL11B;;chr20:39317868..39317884,-!p1@MAFB!1.12!142.91!MAFB;;chr2:223163706..223163730,-!p1@PAX3!1.12!12.05!PAX3;;chr2:176969179..176969226,+!p2@HOXD11!1.10!11.71!HOXD11;;chr6:50786057..50786069,+!p9@TFAP2B!1.10!11.71!TFAP2B;;chr7:113726357..113726443,+!p1@FOXP2!1.08!19.18!FOXP2;;chr4:299227..299272,-!p1@ZNF732!1.08!11.03!ZNF732;;chr2:66662281..66662308,+!p1@MEIS1!1.07!37.17!MEIS1;;chr2:176972000..176972025,+!p4@HOXD11!1.06!10.52!HOXD11;;chr12:85673977..85674015,+!p1@ALX1!1.04!9.84!ALX1;;chr2:239148671..239148686,-!p1@HES6!1.03!36.15!HES6;;chr20:62680984..62680999,-!p1@SOX18!1.03!12.90!SOX18;;chr19:22817119..22817145,+!p1@ZNF492!1.00!15.11!ZNF492;;chrX:84499081..84499115,+!p2@ZNF711!1.00!13.41!ZNF711;;chrX:84498989..84499003,+!p1@ZNF711!1.00!12.56!ZNF711;;chr14:37131058..37131139,+!p1@PAX9!1.00!9.00!PAX9;;chr2:176969097..176969109,+!p3@HOXD11!0.99!8.83!HOXD11;;chr15:83953397..83953425,-!p1@BNC1!0.98!9.84!BNC1;;chr20:42543441..42543497,+!p1@TOX2!0.95!36.49!TOX2;;chr13:100634004..100634025,+!p2@ZIC2!0.95!7.98!ZIC2;;chr8:128748308..128748324,+!p2@MYC!0.94!221.67!MYC;;chr8:11561684..11561751,+!p1@GATA4!0.94!7.64!GATA4;;chr1:24645832..24645853,+!p1@GRHL3!0.93!7.47!GRHL3;;chr17:38465441..38465481,+!p6@RARA!0.92!9.00!RARA;;chr8:145669791..145669834,-!p1@TONSL!0.91!21.39!TONSL;;chr2:71127699..71127744,+!p1@VAX2!0.91!14.94!VAX2;;chr5:134369905..134369972,-!p1@PITX1!0.91!11.03!PITX1;;chr9:132427883..132427951,+!p2@PRRX2!0.91!7.13!PRRX2;;chr2:219849012..219849065,-!p1@FEV!0.91!7.13!FEV;;chr11:16627528..16627550,-!p7@SOX6!0.90!6.96!SOX6;;chr2:145277640..145277771,-!p1@ZEB2!0.89!96.41!ZEB2;;chr20:32274179..32274213,-!p1@E2F1!0.88!46.34!E2F1;;chr20:42543506..42543549,+!p2@TOX2!0.88!16.63!TOX2;;chr2:113993052..113993097,-!p2@PAX8!0.88!15.45!PAX8;;chr1:18958059..18958081,+!p6@PAX7!0.88!6.62!PAX7;;chr13:100638100..100638115,+!p4@ZIC2!0.88!6.62!ZIC2;;chr19:23433144..23433204,-!p1@ZNF724P!0.87!30.04!ZNF724P;;chr7:121944689..121944705,-!p2@FEZF1!0.87!6.45!FEZF1;;chr8:40755333..40755352,-!p1@ZMAT4!0.87!6.45!ZMAT4;;chr12:85674018..85674039,+!p3@ALX1!0.87!6.45!ALX1;;chr1:153940354..153940395,+!p1@CREB3L4!0.86!26.99!CREB3L4;;chr2:25475120..25475176,-!p2@DNMT3A!0.86!8.66!DNMT3A;;chr2:5832493..5832507,+!p2@SOX11!0.86!6.28!SOX11;;chr10:102891048..102891078,+!p1@TLX1!0.86!6.28!TLX1;;chr7:150974206..150974255,-!p1@SMARCD3!0.85!39.89!SMARCD3;;chr17:46688334..46688385,-!p1@HOXB7!0.85!9.00!HOXB7;;chr17:53342311..53342400,+!p1@HLF!0.85!6.96!HLF;;chr15:57511589..57511608,+!p4@TCF12!0.85!6.11!TCF12;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!0.85!6.11!PEG3;;chr11:44331576..44331650,-!p1@ALX4!0.85!6.11!ALX4;;chr1:23857698..23857733,-!p1@E2F2!0.84!11.20!E2F2;;chrX:131624056..131624069,-!p2@MBNL3!0.84!8.32!MBNL3;;chr19:24097675..24097699,+!p1@ZNF726!0.83!20.54!ZNF726;;chr15:42749722..42749739,-!p2@ZFP106!0.83!10.86!ZFP106;;chr20:35202909..35202963,+!p2@TGIF2,p3@C20orf24!0.83!8.49!TGIF2;;chr2:176969124..176969155,+!p5@HOXD11!0.82!5.60!HOXD11;;chr11:16629288..16629315,-!p8@SOX6!0.82!5.60!SOX6;;chr12:54348655..54348693,+!p1@HOXC12!0.82!5.60!HOXC12;;chr20:42295745..42295765,+!p1@MYBL2!0.81!96.75!MYBL2;;chr17:46806067..46806097,-!p1@HOXB13!0.81!5.43!HOXB13;;chr17:46806035..46806059,-!p2@HOXB13!0.80!5.26!HOXB13;;chr3:193853927..193853944,+!p1@HES1!0.79!181.95!HES1;;chr14:21994337..21994442,-!p1@SALL2!0.79!15.28!SALL2;;chr10:70320074..70320106,+!p1@TET1!0.79!10.86!TET1;;chr8:86089369..86089408,+!p1@E2F5!0.78!14.60!E2F5;;chr8:86089417..86089440,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!0.18!0.85!YBX1;;chrX:24167800..24167811,+!p3@ZFX!0.18!0.85!ZFX;;chr11:65686702..65686715,+!p11@DRAP1!0.18!0.68!DRAP1;;chr15:96876340..96876348,+!p22@NR2F2!0.18!0.68!NR2F2;;chr17:46622440..46622477,-!p5@HOXB2!0.18!0.68!HOXB2;;chr15:31631789..31631811,+!p13@KLF13!0.18!0.51!KLF13;;chr15:83953474..83953483,-!p3@BNC1!0.18!0.51!BNC1;;chr16:54320127..54320148,-!p6@IRX3!0.18!0.51!IRX3;;chr17:40719286..40719299,+!p6@MLX!0.18!0.51!MLX;;chr17:41739283..41739297,-!p1@MEOX1!0.18!0.51!MEOX1;;chr17:4981535..4981551,+!p2@ZFP3!0.18!0.51!ZFP3;;chr17:7387459..7387470,-!p10@ZBTB4!0.18!0.51!ZBTB4;;chr17:7387486..7387497,-!p11@ZBTB4!0.18!0.51!ZBTB4;;chr18:53068940..53068951,-!p21@TCF4!0.18!0.51!TCF4;;chr19:19281060..19281078,-!p2@MEF2BNB-MEF2B,p2@MEF2B!0.18!0.51!MEF2B;;chrX:2418598..2418621,-!p2@ZBED1!0.18!0.51!ZBED1;;chr5:134369848..134369853,-!p6@PITX1!0.18!0.51!PITX1;;chr6:135502472..135502489,+!p3@MYB!0.18!0.51!MYB;;chr6:41040905..41040916,+!p4@NFYA!0.18!0.51!NFYA;;chr7:27196267..27196311,-!p1@HOXA7!0.18!0.51!HOXA7;;chr7:50343634..50343717,+!p2@IKZF1!0.18!0.51!IKZF1;;chr7:63505799..63505904,+!p1@ZNF727!0.18!0.51!ZNF727;;chr7:64126496..64126498,+!p3@ZNF107!0.18!0.51!ZNF107;;chr7:73038867..73038878,-!p2@MLXIPL!0.18!0.51!MLXIPL;;chr8:72756194..72756208,-!p9@MSC!0.18!0.51!MSC;;chr8:86089531..86089544,+!p7@E2F5!0.18!0.51!E2F5;;chr8:86089662..86089671,+!p12@E2F5!0.18!0.51!E2F5;;chr2:145147356..145147376,-!p24@ZEB2!0.18!0.51!ZEB2;;chr2:145277632..145277638,-!p17@ZEB2!0.18!0.51!ZEB2;;chr2:145277870..145277874,-!p39@ZEB2!0.18!0.51!ZEB2;;chr2:169312350..169312362,+!p4@CERS6!0.18!0.51!CERS6;;chr2:178129619..178129633,-!p16@NFE2L2!0.18!0.51!NFE2L2;;chr2:219849008..219849011,-!p13@FEV!0.18!0.51!FEV;;chr2:25474941..25474953,-!p16@DNMT3A!0.18!0.51!DNMT3A;;chr2:25475185..25475196,-!p15@DNMT3A!0.18!0.51!DNMT3A;;chr2:42721205..42721307,+!p4@MTA3!0.18!0.51!MTA3;;chr2:66662797..66662818,+!p10@MEIS1!0.18!0.51!MEIS1;;chr2:66666432..66666462,+!p7@MEIS1!0.18!0.51!MEIS1;;chr3:128205779..128205797,-!p5@GATA2!0.18!0.51!GATA2;;chr3:128205801..128205819,-!p6@GATA2!0.18!0.51!GATA2;;chr3:141106458..141106491,+!p20@ZBTB38!0.18!0.51!ZBTB38;;chr3:157824001..157824078,-!p2@SHOX2!0.18!0.51!SHOX2;;chr3:181429641..181429650,+!p3@SOX2!0.18!0.51!SOX2;;chr3:193854202..193854232,+!p2@HES1!0.18!0.51!HES1;;chr3:33431150..33431185,-!p9@UBP1!0.18!0.51!UBP1;;chr4:174450089..174450153,-!p2@HAND2!0.18!0.51!HAND2;;chr4:174451350..174451363,-!p3@HAND2!0.18!0.51!HAND2;;chr4:87927888..87927912,+!p18@AFF1!0.18!0.51!AFF1;;chr10:70320041..70320065,+!p2@TET1!0.18!0.51!TET1;;chr10:70320115..70320126,+!p3@TET1!0.18!0.51!TET1;;chr11:113930401..113930422,+!p3@ZBTB16!0.18!0.51!ZBTB16;;chr11:16133375..16133390,-!p19@SOX6!0.18!0.51!SOX6;;chr11:31832687..31832704,-!p6@PAX6!0.18!0.51!PAX6;;chr11:76092029..76092038,-!p4@PRKRIR!0.18!0.51!PRKRIR;;chr12:125003168..125003180,-!p15@NCOR2!0.18!0.51!NCOR2;;chr12:54348702..54348715,+!p2@HOXC12!0.18!0.51!HOXC12;;chr12:54378864..54378884,+!p6@HOXC10!0.18!0.51!HOXC10;;chr12:54378984..54378996,+!p7@HOXC10!0.18!0.51!HOXC10;;chr12:54379477..54379498,+!p5@HOXC5!0.18!0.51!HOXC5;;chr12:57853634..57853662,+!p2@GLI1!0.18!0.51!GLI1;;chr12:57917037..57917052,+!p9@MBD6!0.18!0.51!MBD6;;chr12:85673913..85673919,+!p7@ALX1!0.18!0.51!ALX1;;chr13:46543936..46543949,-!p19@ZC3H13!0.18!0.51!ZC3H13;;chr13:46619549..46619573,-!p28@ZC3H13!0.18!0.51!ZC3H13;;chr14:22005018..22005040,-!p6@SALL2!0.18!0.51!SALL2;;chr14:22005062..22005082,-!p7@SALL2!0.18!0.51!SALL2;;chr14:33403930..33403943,+!p7@NPAS3!0.18!0.51!NPAS3;;chr19:38720356..38720369,-!p4@DPF1!0.18!0.51!DPF1;;chr19:47523058..47523114,+!p1@NPAS1!0.18!0.51!NPAS1;;chr19:54024313..54024361,+!p7@ZNF331!0.18!0.51!ZNF331;;
+|ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0010316
 |fonse_cell_line=FF:10774-110F9
 |fonse_cell_line_closure=FF:10774-110F9

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FF:10774-110F9: Difference between revisions

From FANTOM5_SSTAR

Revision as of 19:50, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0