FF:11269-116G9: Difference between revisions

Revision as of 20:24, 9 July 2012

Name:	Fibroblast - Dermal, donor1
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	skin
dev stage	71 years old adult
sex	male
age	71
cell type	fibroblast
cell line	NA
company	Cell Applications
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	1378
catalog number	CA106-R10a
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.0654
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.0954
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	-0.011
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.226
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.0964
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.608
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.0965
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.065
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.194
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.114
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	-0.0385
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.0309
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.127
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.0799
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	-0.0333
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.37
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.581
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.118
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.836
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12499

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.794
MA0003.1	MA0003.1	0.199
MA0004.1	MA0004.1	0.117
MA0006.1	MA0006.1	0.965
MA0007.1	MA0007.1	0.028
MA0009.1	MA0009.1	0.289
MA0014.1	MA0014.1	0.998
MA0017.1	MA0017.1	0.407
MA0018.2	MA0018.2	5.54934e-7
MA0019.1	MA0019.1	0.748
MA0024.1	MA0024.1	1.16689e-4
MA0025.1	MA0025.1	0.00332
MA0027.1	MA0027.1	0.864
MA0028.1	MA0028.1	0.59
MA0029.1	MA0029.1	0.308
MA0030.1	MA0030.1	0.0679
MA0031.1	MA0031.1	0.22
MA0035.2	MA0035.2	0.188
MA0038.1	MA0038.1	3.71776e-4
MA0039.2	MA0039.2	0.23
MA0040.1	MA0040.1	0.854
MA0041.1	MA0041.1	0.559
MA0042.1	MA0042.1	0.722
MA0043.1	MA0043.1	1.16004e-7
MA0046.1	MA0046.1	0.602
MA0047.2	MA0047.2	0.219
MA0048.1	MA0048.1	0.352
MA0050.1	MA0050.1	9.94855e-6
MA0051.1	MA0051.1	0.0088
MA0052.1	MA0052.1	0.931
MA0055.1	MA0055.1	0.4
MA0057.1	MA0057.1	0.179
MA0058.1	MA0058.1	0.131
MA0059.1	MA0059.1	0.0108
MA0060.1	MA0060.1	6.40247e-7
MA0061.1	MA0061.1	0.535
MA0062.2	MA0062.2	0.00315
MA0065.2	MA0065.2	0.0861
MA0066.1	MA0066.1	0.0286
MA0067.1	MA0067.1	0.0177
MA0068.1	MA0068.1	0.16
MA0069.1	MA0069.1	0.374
MA0070.1	MA0070.1	0.937
MA0071.1	MA0071.1	0.282
MA0072.1	MA0072.1	0.949
MA0073.1	MA0073.1	0.768
MA0074.1	MA0074.1	0.202
MA0076.1	MA0076.1	0.138
MA0077.1	MA0077.1	0.525
MA0078.1	MA0078.1	0.613
MA0079.2	MA0079.2	0.971
MA0080.2	MA0080.2	3.64887e-5
MA0081.1	MA0081.1	0.132
MA0083.1	MA0083.1	0.434
MA0084.1	MA0084.1	0.704
MA0087.1	MA0087.1	0.636
MA0088.1	MA0088.1	0.00295
MA0090.1	MA0090.1	0.0765
MA0091.1	MA0091.1	0.112
MA0092.1	MA0092.1	0.597
MA0093.1	MA0093.1	0.177
MA0099.2	MA0099.2	2.04336e-4
MA0100.1	MA0100.1	0.949
MA0101.1	MA0101.1	0.0178
MA0102.2	MA0102.2	0.0827
MA0103.1	MA0103.1	0.0956
MA0104.2	MA0104.2	0.0225
MA0105.1	MA0105.1	0.138
MA0106.1	MA0106.1	0.0133
MA0107.1	MA0107.1	0.00517
MA0108.2	MA0108.2	0.625
MA0111.1	MA0111.1	0.926
MA0112.2	MA0112.2	0.00318
MA0113.1	MA0113.1	0.0918
MA0114.1	MA0114.1	0.206
MA0115.1	MA0115.1	0.878
MA0116.1	MA0116.1	0.121
MA0117.1	MA0117.1	0.164
MA0119.1	MA0119.1	0.0759
MA0122.1	MA0122.1	0.675
MA0124.1	MA0124.1	0.351
MA0125.1	MA0125.1	0.169
MA0131.1	MA0131.1	0.0652
MA0135.1	MA0135.1	0.384
MA0136.1	MA0136.1	9.36107e-5
MA0137.2	MA0137.2	0.124
MA0138.2	MA0138.2	0.612
MA0139.1	MA0139.1	0.618
MA0140.1	MA0140.1	0.295
MA0141.1	MA0141.1	0.00915
MA0142.1	MA0142.1	0.336
MA0143.1	MA0143.1	0.36
MA0144.1	MA0144.1	0.984
MA0145.1	MA0145.1	0.529
MA0146.1	MA0146.1	0.215
MA0147.1	MA0147.1	0.0109
MA0148.1	MA0148.1	0.288
MA0149.1	MA0149.1	0.178
MA0150.1	MA0150.1	0.974
MA0152.1	MA0152.1	0.312
MA0153.1	MA0153.1	0.86
MA0154.1	MA0154.1	0.376
MA0155.1	MA0155.1	0.629
MA0156.1	MA0156.1	2.2634e-4
MA0157.1	MA0157.1	0.703
MA0159.1	MA0159.1	0.223
MA0160.1	MA0160.1	0.389
MA0162.1	MA0162.1	0.115
MA0163.1	MA0163.1	6.66194e-4
MA0164.1	MA0164.1	0.598
MA0258.1	MA0258.1	0.202
MA0259.1	MA0259.1	0.178

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12499

Novel motif	Logo	P-value
1	1	0.224
10	10	0.162
100	100	0.607
101	101	0.782
102	102	0.732
103	103	0.0788
104	104	0.573
105	105	0.394
106	106	0.458
107	107	0.61
108	108	0.0945
109	109	0.0362
11	11	0.0664
110	110	0.0627
111	111	0.0696
112	112	0.392
113	113	0.0248
114	114	0.083
115	115	0.428
116	116	0.0394
117	117	0.245
118	118	0.218
119	119	0.946
12	12	0.663
120	120	0.0172
121	121	0.808
122	122	0.301
123	123	0.0142
124	124	0.559
125	125	0.515
126	126	0.544
127	127	0.413
128	128	0.286
129	129	0.748
13	13	0.616
130	130	0.696
131	131	0.911
132	132	0.436
133	133	0.387
134	134	0.154
135	135	0.762
136	136	0.651
137	137	0.183
138	138	0.81
139	139	0.827
14	14	0.235
140	140	0.771
141	141	0.704
142	142	0.937
143	143	0.063
144	144	0.386
145	145	0.297
146	146	0.495
147	147	0.0594
148	148	0.48
149	149	0.0539
15	15	0.444
150	150	0.347
151	151	0.587
152	152	0.102
153	153	0.386
154	154	0.52
155	155	0.0632
156	156	0.327
157	157	0.986
158	158	0.0683
159	159	0.286
16	16	0.0629
160	160	0.0666
161	161	0.614
162	162	0.579
163	163	0.883
164	164	0.112
165	165	0.821
166	166	0.641
167	167	0.853
168	168	0.13
169	169	0.0149
17	17	0.215
18	18	0.0566
19	19	0.0258
2	2	0.488
20	20	0.855
21	21	0.0709
22	22	0.074
23	23	0.586
24	24	0.373
25	25	0.693
26	26	0.059
27	27	0.116
28	28	0.146
29	29	0.0604
3	3	0.342
30	30	0.677
31	31	0.514
32	32	0.00862
33	33	0.426
34	34	0.872
35	35	0.459
36	36	0.324
37	37	0.0357
38	38	0.818
39	39	0.244
4	4	0.108
40	40	0.623
41	41	0.709
42	42	0.907
43	43	0.153
44	44	0.118
45	45	0.853
46	46	0.0749
47	47	0.365
48	48	0.234
49	49	0.308
5	5	0.847
50	50	0.313
51	51	0.172
52	52	0.883
53	53	0.252
54	54	0.251
55	55	0.079
56	56	0.804
57	57	0.297
58	58	0.768
59	59	0.156
6	6	0.888
60	60	0.969
61	61	0.76
62	62	0.685
63	63	0.0898
64	64	0.649
65	65	0.251
66	66	0.711
67	67	0.705
68	68	0.473
69	69	0.222
7	7	0.547
70	70	0.0461
71	71	0.115
72	72	0.826
73	73	0.0247
74	74	0.323
75	75	0.135
76	76	0.63
77	77	0.0711
78	78	0.78
79	79	0.114
8	8	0.00768
80	80	0.265
81	81	0.589
82	82	0.467
83	83	0.884
84	84	0.134
85	85	0.0785
86	86	0.72
87	87	0.0234
88	88	0.732
89	89	0.0635
9	9	0.252
90	90	0.993
91	91	0.985
92	92	0.0799
93	93	0.87
94	94	0.209
95	95	0.0672
96	96	0.874
97	97	0.85
98	98	0.398
99	99	0.011

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12499

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000062 human dermal fibroblast sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000057 (fibroblast)
0002620 (skin fibroblast)
0002551 (fibroblast of dermis)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002097 (skin of body)
0002199 (integument)
0002384 (connective tissue)
0000479 (tissue)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0004923 (organ component layer)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003102 (surface structure)
0010317 (germ layer / neural crest derived structure)
0002067 (dermis)
0002416 (integumental system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000057 (fibroblast sample)
0000250 (human fibroblast of skin sample)
0000001 (sample)
0000062 (human dermal fibroblast sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr6:34204921..34204939,+!p3@HMGA1!1.83!1859.85!HMGA1;;chr1:170632285..170632309,+!p1@PRRX1!1.62!45.89!PRRX1;;chr2:239756671..239756732,+!p1@TWIST2!1.55!107.70!TWIST2;;chr1:170633348..170633399,+!p2@PRRX1!1.50!40.89!PRRX1;;chr2:239756739..239756755,+!p2@TWIST2!1.47!48.07!TWIST2;;chr12:66218836..66218888,+!p1@HMGA2!1.46!247.86!HMGA2;;chr3:12330560..12330579,+!p1@PPARG!1.45!30.90!PPARG;;chr2:19558373..19558392,-!p1@OSR1!1.37!60.87!OSR1;;chr6:134210243..134210257,+!p1@TCF21!1.35!21.23!TCF21;;chr12:66218255..66218304,+!p3@HMGA2!1.32!52.44!HMGA2;;chr15:57511609..57511651,+!p2@TCF12!1.30!31.22!TCF12;;chr12:66218923..66218934,+!p14@HMGA2!1.30!18.73!HMGA2;;chr19:46801639..46801699,+!p1@HIF3A!1.30!18.73!HIF3A;;chr12:66218598..66218645,+!p2@HMGA2!1.29!84.60!HMGA2;;chr8:25902876..25902936,-!p1@EBF2!1.27!17.48!EBF2;;chr12:66218904..66218913,+!p11@HMGA2!1.24!16.23!HMGA2;;chr1:170633262..170633285,+!p3@PRRX1!1.23!18.42!PRRX1;;chr15:42749722..42749739,-!p2@ZFP106!1.20!26.53!ZFP106;;chr11:47279504..47279563,+!p1@NR1H3!1.19!33.09!NR1H3;;chr11:65687362..65687436,+!p3@DRAP1!1.17!62.12!DRAP1;;chr3:12329397..12329433,+!p2@PPARG!1.15!29.66!PPARG;;chr17:59477233..59477263,+!p1@TBX2!1.14!39.64!TBX2;;chr1:170632250..170632277,+!p7@PRRX1!1.14!12.80!PRRX1;;chr1:170632959..170632987,+!p4@PRRX1!1.12!13.42!PRRX1;;chr5:2751762..2751784,-!p1@IRX2!1.11!11.86!IRX2;;chr9:132427972..132428056,+!p1@PRRX2!1.10!15.30!PRRX2;;chr2:102091566..102091581,-!p1@RFX8!1.08!10.93!RFX8;;chr8:128748308..128748324,+!p2@MYC!1.07!301.23!MYC;;chr11:65686802..65686818,+!p6@DRAP1!1.07!18.73!DRAP1;;chr11:65686732..65686756,+!p2@DRAP1!1.06!44.95!DRAP1;;chr3:141105705..141105770,+!p4@ZBTB38!1.05!12.49!ZBTB38;;chr1:170632723..170632739,+!p8@PRRX1!1.03!9.68!PRRX1;;chr1:170633058..170633084,+!p5@PRRX1!1.00!9.05!PRRX1;;chr8:49833948..49833973,-!p2@SNAI2!0.99!56.50!SNAI2;;chr2:223163706..223163730,-!p1@PAX3!0.99!8.74!PAX3;;chr3:138665937..138665968,-!p1@FOXL2!0.96!8.12!FOXL2;;chr6:85474299..85474324,-!p1@TBX18!0.95!14.36!TBX18;;chr12:66218443..66218461,+!p8@HMGA2!0.94!9.99!HMGA2;;chr12:85673977..85674015,+!p1@ALX1!0.94!7.80!ALX1;;chr11:65667884..65667895,-!p2@FOSL1!0.93!29.97!FOSL1;;chr7:19157248..19157268,-!p1@TWIST1!0.93!21.54!TWIST1;;chr4:26322267..26322334,+!p3@RBPJ!0.92!18.11!RBPJ;;chr5:133450365..133450444,+!p1@TCF7!0.88!31.53!TCF7;;chr1:170632477..170632506,+!p6@PRRX1!0.88!6.56!PRRX1;;chr12:66358080..66358094,+!p15@HMGA2!0.88!6.56!HMGA2;;chr3:157823517..157823562,-!p1@SHOX2!0.87!6.87!SHOX2;;chr15:57511589..57511608,+!p4@TCF12!0.86!6.24!TCF12;;chr3:12329358..12329393,+!p3@PPARG!0.85!15.61!PPARG;;chr20:55204351..55204377,+!p1@TFAP2C!0.85!7.80!TFAP2C;;chr6:34204973..34204990,+!p4@HMGA1!0.84!83.66!HMGA1;;chr12:66357214..66357233,+!p13@HMGA2!0.84!5.93!HMGA2;;chr12:53614115..53614154,-!p1@RARG!0.83!33.09!RARG;;chr11:46299199..46299233,+!p1@CREB3L1!0.82!30.90!CREB3L1;;chr2:200323414..200323455,-!p1@SATB2!0.81!12.17!SATB2;;chr12:66218212..66218244,+!p5@HMGA2!0.81!8.12!HMGA2;;chr11:65687222..65687240,+!p7@DRAP1!0.81!7.18!DRAP1;;chr1:170632137..170632172,+!p10@PRRX1!0.80!5.31!PRRX1;;chr2:119604456..119604501,-!p2@EN1!0.80!5.31!EN1;;chr16:86600426..86600441,+!p1@FOXC2!0.79!13.42!FOXC2;;chr7:19157043..19157088,-!p2@TWIST1!0.78!13.42!TWIST1;;chr15:96874145..96874166,+!p7@NR2F2!0.78!10.30!NR2F2;;chr2:102091144..102091183,-!p2@RFX8!0.78!4.99!RFX8;;chr2:175199675..175199688,+!p1@SP9!0.78!4.99!SP9;;chr12:115122318..115122331,-!p2@TBX3!0.78!4.99!TBX3;;chr7:14029283..14029311,-!p1@ETV1!0.77!28.72!ETV1;;chr6:34205372..34205412,+!p5@HMGA1!0.77!26.85!HMGA1;;chr20:42543441..42543497,+!p1@TOX2!0.77!23.72!TOX2;;chr12:66218183..66218209,+!p4@HMGA2!0.76!9.68!HMGA2;;chr1:158985493..158985535,+!p4@IFI16!0.76!7.49!IFI16;;chr17:59477275..59477286,+!p3@TBX2!0.76!6.56!TBX2;;chr6:34204672..34204692,+!p1@HMGA1!0.75!578.43!HMGA1;;chr19:13134772..13134822,+!p2@NFIX!0.75!7.18!NFIX;;chr12:66218573..66218596,+!p7@HMGA2!0.75!7.18!HMGA2;;chr11:47279248..47279264,+!p3@NR1H3!0.75!5.31!NR1H3;;chr2:176994408..176994492,+!p1@HOXD8!0.75!4.68!HOXD8;;chr17:59477403..59477414,+!p4@TBX2!0.75!4.68!TBX2;;chr17:59477197..59477212,+!p2@TBX2!0.74!8.12!TBX2;;chr2:200322654..200322707,-!p2@SATB2!0.74!6.87!SATB2;;chr8:49833978..49833996,-!p1@SNAI2!0.73!100.52!SNAI2;;chr17:7492684..7492778,-!p2@SOX15!0.73!9.99!SOX15;;chr12:66218469..66218477,+!p16@HMGA2!0.73!4.37!HMGA2;;chrY:21906594..21906622,-!p1@KDM5D!0.73!4.37!KDM5D;;chr5:174151553..174151610,+!p1@MSX2!0.70!7.18!MSX2;;chr12:66218378..66218401,+!p6@HMGA2!0.70!6.56!HMGA2;;chr5:158526459..158526481,-!p2@EBF1!0.70!5.62!EBF1;;chr12:85674018..85674039,+!p3@ALX1!0.70!4.06!ALX1;;chr1:170632683..170632696,+!p12@PRRX1!0.70!4.06!PRRX1;;chr1:170633100..170633112,+!p19@PRRX1!0.70!4.06!PRRX1;;chr5:158526917..158526932,-!p1@EBF1!0.69!10.61!EBF1;;chr17:1959369..1959388,+!p2@HIC1!0.68!10.93!HIC1;;chr14:24837368..24837401,+!p1@NFATC4!0.68!9.68!NFATC4;;chr11:65687243..65687276,+!p8@DRAP1!0.68!5.31!DRAP1;;chr10:131762504..131762555,-!p1@EBF3!0.68!3.75!EBF3;;chr11:65688877..65688891,+!p13@DRAP1!0.68!3.75!DRAP1;;chr1:170632439..170632465,+!p11@PRRX1!0.68!3.75!PRRX1;;chr1:170632762..170632786,+!p13@PRRX1!0.68!3.75!PRRX1;;chr1:170633245..170633256,+!p14@PRRX1!0.68!3.75!PRRX1;;chr9:16705069..16705086,-!p3@BNC2!0.68!3.75!BNC2;;chr9:132427883..132427951,+!p2@PRRX2!0.68!3.75!PRRX2;;chr11:65667846..65667868,-!p1@FOSL1!0.67!112.38!FOSL1;;chr12:115121962..115121987,-!p1@TBX3!0.67!35.59!TBX3;;chr5:321810..321877,+!p1@AHRR!0.67!13.11!AHRR;;chr17:41622765..41622821,-!p2@ETV4!0.67!5.93!ETV4;;chr8:128750654..128750793,+!p3@MYC!0.66!16.54!MYC;;chr11:46299539..46299620,+!p2@CREB3L1!0.66!6.56!CREB3L1;;chr8:128747661..128747703,+!p6@MYC!0.65!4.99!MYC;;chr16:86612320..86612394,+!p1@FOXL1!0.65!3.43!FOXL1;;chr3:138665969..138665993,-!p2@FOXL2!0.65!3.43!FOXL2;;chr20:42543506..42543549,+!p2@TOX2!0.63!8.74!TOX2;;chr5:43067636..43067674,+!p6@ZNF131!0.63!4.68!ZNF131;;chr8:128747757..128747800,+!p7@MYC!0.63!4.68!MYC;;chr8:93074803..93074845,-!p1@RUNX1T1!0.62!3.12!RUNX1T1;;chr1:170632115..170632136,+!p9@PRRX1!0.62!3.12!PRRX1;;chr11:46299443..46299459,+!p4@CREB3L1!0.62!3.12!CREB3L1;;chr12:66218420..66218439,+!p12@HMGA2!0.62!3.12!HMGA2;;chrY:2803415..2803468,+!p1@ZFY!0.62!3.12!ZFY;;chr2:177016272..177016286,+!p2@HOXD4!0.62!3.12!HOXD4;;chr2:191906489..191906517,-!p6@STAT4!0.62!3.12!STAT4;;chr2:19558327..19558334,-!p2@OSR1!0.62!3.12!OSR1;;chr16:86600870..86600921,+!p2@FOXC2!0.62!3.12!FOXC2;;chr4:26322373..26322393,+!p4@RBPJ!0.60!4.68!RBPJ;;chr6:1389789..1389821,+!p1@FOXF2!0.60!4.37!FOXF2;;chr17:41622925..41622976,-!p3@ETV4!0.59!4.68!ETV4;;chr14:21566731..21566836,-!p1@ZNF219!0.58!36.83!ZNF219;;chr21:30671690..30671762,+!p2@BACH1!0.58!11.24!BACH1;;chr2:242576431..242576458,-!p3@THAP4!0.58!7.80!THAP4;;chr15:96869255..96869291,+!p6@NR2F2!0.58!5.62!NR2F2;;chr15:96869114..96869160,+!p11@NR2F2!0.58!4.06!NR2F2;;chr2:102091478..102091490,-!p3@RFX8!0.58!2.81!RFX8;;chr2:177016336..177016350,+!p1@HOXD4!0.58!2.81!HOXD4;;chr12:115122303..115122314,-!p6@TBX3!0.58!2.81!TBX3;;chr19:9609272..9609297,-!p1@ZNF560!0.58!2.81!ZNF560;;chr1:119530493..119530572,-!p1@TBX15!0.58!2.81!TBX15;;chr1:170632028..170632043,+!p20@PRRX1!0.58!2.81!PRRX1;;chr5:2751785..2751808,-!p2@IRX2!0.58!2.81!IRX2;;chr11:65687158..65687216,+!p4@DRAP1!0.57!18.73!DRAP1;;chr7:100076723..100076737,-!p3@TSC22D4!0.56!4.68!TSC22D4;;chr20:39946361..39946379,-!p2@ZHX3!0.55!9.05!ZHX3;;chr15:96874244..96874259,+!p5@NR2F2!0.55!7.18!NR2F2;;chr8:128750555..128750609,+!p5@MYC!0.55!5.93!MYC;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!0.55!2.81!GLIS1;;chr12:96588143..96588185,+!p1@ELK3!0.54!38.08!ELK3;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!0.54!2.50!POU3F3;;chr2:175199697..175199706,+!p2@SP9!0.54!2.50!SP9;;chr3:21792631..21792665,-!p3@ZNF385D!0.54!2.50!ZNF385D;;chr4:26322673..26322684,+!p11@RBPJ!0.54!2.50!RBPJ;;chr7:44143925..44143970,+!p1@AEBP1!0.53!68.68!AEBP1;;chr1:158979792..158979814,+!p2@IFI16!0.53!29.34!IFI16;;chr5:72744594..72744609,-!p1@FOXD1!0.53!13.42!FOXD1;;chr20:48807456..48807475,+!p3@CEBPB!0.53!5.31!CEBPB;;chr12:10875351..10875422,-!p4@CSDA!0.53!5.31!CSDA;;chr7:113726357..113726443,+!p1@FOXP2!0.53!4.68!FOXP2;;chr3:141121847..141121868,+!p5@ZBTB38!0.53!4.06!ZBTB38;;chr15:96874216..96874236,+!p13@NR2F2!0.52!4.06!NR2F2;;chr20:48807648..48807671,+!p9@CEBPB!0.52!3.75!CEBPB;;chr10:31607702..31607755,+!p3@ZEB1!0.52!2.81!ZEB1;;chr12:96588219..96588263,+!p2@ELK3!0.51!20.91!ELK3;;chr17:61919985..61920012,-!p3@SMARCD2!0.51!6.56!SMARCD2;;chr2:113993052..113993097,-!p2@PAX8!0.51!5.93!PAX8;;chr7:4721870..4721878,+!p2@FOXK1!0.51!3.75!FOXK1;;chr3:178789522..178789564,-!p2@ZMAT3!0.50!20.60!ZMAT3;;chr6:85473156..85473210,-!p2@TBX18!0.50!2.81!TBX18;;chr8:93074848..93074871,-!p3@RUNX1T1!0.50!2.19!RUNX1T1;;chr3:12329464..12329472,+!p6@PPARG!0.50!2.19!PPARG;;chr12:53613935..53613947,-!p8@RARG!0.50!2.19!RARG;;chr1:170632310..170632321,+!p15@PRRX1!0.50!2.19!PRRX1;;chr1:170632907..170632916,+!p22@PRRX1!0.50!2.19!PRRX1;;chr1:170633194..170633205,+!p18@PRRX1!0.50!2.19!PRRX1;;chr1:170633225..170633230,+!p25@PRRX1!0.50!2.19!PRRX1;;chr20:48807351..48807384,+!p1@CEBPB!0.49!289.37!CEBPB;;chr3:37217736..37217753,-!p2@LRRFIP2!0.49!11.24!LRRFIP2;;chr19:42636586..42636607,-!p1@POU2F2!0.49!7.18!POU2F2;;chr10:77161133..77161176,-!p3@ZNF503!0.48!5.31!ZNF503;;chr7:44143978..44143989,+!p2@AEBP1!0.48!4.37!AEBP1;;chr9:16870710..16870763,-!p1@BNC2!0.48!4.06!BNC2;;chr17:41623009..41623053,-!p4@ETV4!0.48!3.75!ETV4;;chr10:31288398..31288455,-!p2@ZNF438!0.48!2.50!ZNF438;;chr5:72743793..72743855,-!p4@FOXD1!0.48!2.50!FOXD1;;chr5:72744445..72744466,-!p2@FOXD1!0.47!3.75!FOXD1;;chr15:96876966..96877017,+!p12@NR2F2!0.47!3.12!NR2F2;;chr1:158985469..158985489,+!p7@IFI16!0.47!2.50!IFI16;;chr11:120107344..120107351,+!p1@POU2F3!0.47!2.50!POU2F3;;chr14:61116183..61116208,-!p1@SIX1!0.46!9.36!SIX1;;chr12:26277956..26277980,-!p1@BHLHE41!0.46!8.74!BHLHE41;;chr20:6748325..6748352,+!p1@BMP2!0.46!3.12!BMP2;;chr9:16870659..16870675,-!p2@BNC2!0.46!2.50!BNC2;;chr15:67418119..67418162,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+|ffid_belonging_in_development=CL:0000134
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:11269-116G9: Difference between revisions

From FANTOM5_SSTAR

Revision as of 20:24, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0