FF:11394-118C8: Difference between revisions

Revision as of 20:53, 9 July 2012

Name:	Fibroblast - Gingival, donor3
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	gum
dev stage	fetus
sex	unknown
age	fetal
cell type	fibroblast
cell line	NA
company	Sciencell/3H
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	427
catalog number	SC2625
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.107
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.0991
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.117
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.0105
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.224
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0.117
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.479
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.0613
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-4.220012e-5
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.446
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.0427
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0.0427
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.0059
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.266
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.0427
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.0816
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.0816
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.15
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.0816
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.0427
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.21
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.33
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12006

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.174
MA0003.1	MA0003.1	0.26
MA0004.1	MA0004.1	0.919
MA0006.1	MA0006.1	0.609
MA0007.1	MA0007.1	0.26
MA0009.1	MA0009.1	0.372
MA0014.1	MA0014.1	0.199
MA0017.1	MA0017.1	0.211
MA0018.2	MA0018.2	0.0552
MA0019.1	MA0019.1	0.894
MA0024.1	MA0024.1	0.0157
MA0025.1	MA0025.1	0.143
MA0027.1	MA0027.1	0.237
MA0028.1	MA0028.1	0.267
MA0029.1	MA0029.1	0.217
MA0030.1	MA0030.1	0.0467
MA0031.1	MA0031.1	0.122
MA0035.2	MA0035.2	0.131
MA0038.1	MA0038.1	0.535
MA0039.2	MA0039.2	0.179
MA0040.1	MA0040.1	0.144
MA0041.1	MA0041.1	0.0856
MA0042.1	MA0042.1	0.112
MA0043.1	MA0043.1	0.284
MA0046.1	MA0046.1	0.58
MA0047.2	MA0047.2	0.113
MA0048.1	MA0048.1	0.444
MA0050.1	MA0050.1	0.744
MA0051.1	MA0051.1	0.539
MA0052.1	MA0052.1	0.561
MA0055.1	MA0055.1	0.937
MA0057.1	MA0057.1	0.707
MA0058.1	MA0058.1	0.757
MA0059.1	MA0059.1	0.0332
MA0060.1	MA0060.1	0.611
MA0061.1	MA0061.1	9.10635e-4
MA0062.2	MA0062.2	1.69646e-4
MA0065.2	MA0065.2	0.0159
MA0066.1	MA0066.1	0.271
MA0067.1	MA0067.1	0.468
MA0068.1	MA0068.1	0.58
MA0069.1	MA0069.1	0.429
MA0070.1	MA0070.1	0.422
MA0071.1	MA0071.1	0.624
MA0072.1	MA0072.1	0.857
MA0073.1	MA0073.1	0.759
MA0074.1	MA0074.1	0.556
MA0076.1	MA0076.1	0.0655
MA0077.1	MA0077.1	0.517
MA0078.1	MA0078.1	0.727
MA0079.2	MA0079.2	0.12
MA0080.2	MA0080.2	1.11094e-8
MA0081.1	MA0081.1	0.156
MA0083.1	MA0083.1	0.643
MA0084.1	MA0084.1	0.132
MA0087.1	MA0087.1	0.345
MA0088.1	MA0088.1	0.732
MA0090.1	MA0090.1	0.289
MA0091.1	MA0091.1	0.481
MA0092.1	MA0092.1	0.451
MA0093.1	MA0093.1	0.9
MA0099.2	MA0099.2	0.32
MA0100.1	MA0100.1	0.817
MA0101.1	MA0101.1	0.00341
MA0102.2	MA0102.2	0.496
MA0103.1	MA0103.1	5.09818e-4
MA0104.2	MA0104.2	0.1
MA0105.1	MA0105.1	1.35424e-7
MA0106.1	MA0106.1	0.658
MA0107.1	MA0107.1	0.00158
MA0108.2	MA0108.2	0.0653
MA0111.1	MA0111.1	0.0561
MA0112.2	MA0112.2	0.0826
MA0113.1	MA0113.1	0.17
MA0114.1	MA0114.1	0.129
MA0115.1	MA0115.1	0.0902
MA0116.1	MA0116.1	3.19583e-5
MA0117.1	MA0117.1	0.207
MA0119.1	MA0119.1	0.936
MA0122.1	MA0122.1	0.69
MA0124.1	MA0124.1	0.314
MA0125.1	MA0125.1	0.374
MA0131.1	MA0131.1	0.797
MA0135.1	MA0135.1	0.106
MA0136.1	MA0136.1	1.25995e-10
MA0137.2	MA0137.2	0.0367
MA0138.2	MA0138.2	0.807
MA0139.1	MA0139.1	0.398
MA0140.1	MA0140.1	0.146
MA0141.1	MA0141.1	0.663
MA0142.1	MA0142.1	0.109
MA0143.1	MA0143.1	0.461
MA0144.1	MA0144.1	0.414
MA0145.1	MA0145.1	0.946
MA0146.1	MA0146.1	0.26
MA0147.1	MA0147.1	0.0495
MA0148.1	MA0148.1	0.185
MA0149.1	MA0149.1	0.262
MA0150.1	MA0150.1	0.971
MA0152.1	MA0152.1	0.624
MA0153.1	MA0153.1	0.821
MA0154.1	MA0154.1	0.0231
MA0155.1	MA0155.1	0.913
MA0156.1	MA0156.1	1.03917e-6
MA0157.1	MA0157.1	0.761
MA0159.1	MA0159.1	0.0203
MA0160.1	MA0160.1	0.627
MA0162.1	MA0162.1	0.466
MA0163.1	MA0163.1	2.74794e-4
MA0164.1	MA0164.1	0.823
MA0258.1	MA0258.1	0.108
MA0259.1	MA0259.1	0.558

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12006

Novel motif	Logo	P-value
1	1	0.0486
10	10	0.144
100	100	0.428
101	101	0.764
102	102	0.429
103	103	0.17
104	104	0.897
105	105	0.657
106	106	0.24
107	107	0.669
108	108	0.835
109	109	0.385
11	11	0.313
110	110	0.429
111	111	0.121
112	112	0.277
113	113	4.82481e-4
114	114	0.166
115	115	0.8
116	116	0.911
117	117	0.389
118	118	0.33
119	119	0.0217
12	12	0.737
120	120	0.734
121	121	0.88
122	122	0.201
123	123	9.55217e-4
124	124	0.159
125	125	0.118
126	126	0.808
127	127	0.568
128	128	0.828
129	129	0.135
13	13	0.0189
130	130	0.0647
131	131	0.303
132	132	0.897
133	133	0.759
134	134	0.309
135	135	0.0316
136	136	0.197
137	137	0.0536
138	138	0.257
139	139	0.0069
14	14	0.328
140	140	0.255
141	141	0.00821
142	142	0.601
143	143	0.046
144	144	0.473
145	145	0.482
146	146	0.799
147	147	0.279
148	148	0.412
149	149	0.691
15	15	0.047
150	150	0.737
151	151	0.478
152	152	0.256
153	153	0.277
154	154	0.484
155	155	0.067
156	156	0.452
157	157	0.55
158	158	0.00201
159	159	0.243
16	16	0.81
160	160	0.293
161	161	0.491
162	162	0.462
163	163	0.5
164	164	0.768
165	165	0.354
166	166	0.89
167	167	0.0631
168	168	0.637
169	169	0.875
17	17	0.501
18	18	0.939
19	19	0.417
2	2	0.563
20	20	0.824
21	21	0.68
22	22	0.414
23	23	0.945
24	24	0.638
25	25	0.0888
26	26	0.214
27	27	0.828
28	28	0.292
29	29	0.512
3	3	0.303
30	30	0.259
31	31	0.925
32	32	0.0267
33	33	0.812
34	34	0.973
35	35	0.119
36	36	0.00328
37	37	0.931
38	38	0.349
39	39	0.954
4	4	0.116
40	40	0.0485
41	41	0.0585
42	42	0.292
43	43	0.296
44	44	0.0577
45	45	0.946
46	46	0.202
47	47	0.0183
48	48	0.163
49	49	0.119
5	5	0.234
50	50	0.354
51	51	0.618
52	52	0.751
53	53	0.353
54	54	0.933
55	55	0.659
56	56	0.591
57	57	0.365
58	58	0.0502
59	59	0.739
6	6	0.505
60	60	0.252
61	61	0.313
62	62	0.0499
63	63	0.773
64	64	0.308
65	65	0.61
66	66	0.966
67	67	0.374
68	68	0.592
69	69	0.884
7	7	0.0676
70	70	0.179
71	71	0.042
72	72	0.787
73	73	0.577
74	74	0.836
75	75	0.0655
76	76	0.861
77	77	0.77
78	78	0.0531
79	79	0.404
8	8	0.354
80	80	0.228
81	81	0.384
82	82	0.077
83	83	0.0252
84	84	0.959
85	85	0.753
86	86	0.842
87	87	0.101
88	88	0.669
89	89	0.38
9	9	0.753
90	90	0.0126
91	91	0.566
92	92	0.601
93	93	0.276
94	94	0.507
95	95	0.687
96	96	0.17
97	97	0.607
98	98	0.202
99	99	0.0126

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12006

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000063 human fibroblast of gingiva sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000057 (fibroblast)
0002552 (fibroblast of gingiva)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002384 (connective tissue)
0000033 (head)
0000479 (tissue)
0001007 (digestive system)
0000344 (mucosa)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0004119 (endoderm-derived structure)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0004923 (organ component layer)
0000161 (orifice)
0001444 (subdivision of head)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003729 (mouth mucosa)
0010317 (germ layer / neural crest derived structure)
0001555 (digestive tract)
0001828 (gingiva)
0001004 (respiratory system)
0000153 (anterior region of body)
0007811 (craniocervical region)
0000165 (mouth)
0000166 (oral opening)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000057 (fibroblast sample)
0000001 (sample)
0000063 (human fibroblast of gingiva sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr9:77112244..77112262,+!p1@RORB!2.01!111.80!RORB;;chr1:170632285..170632309,+!p1@PRRX1!1.99!107.67!PRRX1;;chr2:45236540..45236577,-!p1@SIX2!1.86!71.40!SIX2;;chr7:19157248..19157268,-!p1@TWIST1!1.82!172.45!TWIST1;;chr16:86544113..86544145,+!p1@FOXF1!1.75!67.99!FOXF1;;chr6:1389789..1389821,+!p1@FOXF2!1.69!65.72!FOXF2;;chr14:37131058..37131139,+!p1@PAX9!1.64!43.09!PAX9;;chr9:96717629..96717644,-!p1@BARX1!1.59!37.61!BARX1;;chr15:57511609..57511651,+!p2@TCF12!1.57!59.93!TCF12;;chr20:55204351..55204377,+!p1@TFAP2C!1.57!45.88!TFAP2C;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!1.51!33.17!GLIS1;;chr9:132427883..132427951,+!p2@PRRX2!1.51!31.00!PRRX2;;chr1:170633348..170633399,+!p2@PRRX1!1.49!40.81!PRRX1;;chr2:239756671..239756732,+!p1@TWIST2!1.48!90.51!TWIST2;;chr9:132427972..132428056,+!p1@PRRX2!1.47!36.58!PRRX2;;chr14:61116183..61116208,-!p1@SIX1!1.43!96.09!SIX1;;chr11:46299199..46299233,+!p1@CREB3L1!1.42!127.30!CREB3L1;;chr6:34204921..34204939,+!p3@HMGA1!1.39!677.09!HMGA1;;chr20:42543441..42543497,+!p1@TOX2!1.38!100.95!TOX2;;chr3:141105705..141105770,+!p4@ZBTB38!1.38!27.79!ZBTB38;;chr14:37126765..37126799,+!p2@PAX9!1.37!22.42!PAX9;;chr15:42749722..42749739,-!p2@ZFP106!1.32!34.92!ZFP106;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.31!19.22!POU3F3;;chr6:1389989..1390019,+!p2@FOXF2!1.30!18.81!FOXF2;;chr12:115122318..115122331,-!p2@TBX3!1.29!18.70!TBX3;;chr16:86600426..86600441,+!p1@FOXC2!1.24!40.09!FOXC2;;chr7:19157043..19157088,-!p2@TWIST1!1.23!40.19!TWIST1;;chr2:239756739..239756755,+!p2@TWIST2!1.23!26.97!TWIST2;;chr7:44143925..44143970,+!p1@AEBP1!1.22!341.70!AEBP1;;chr2:19558373..19558392,-!p1@OSR1!1.22!42.47!OSR1;;chr19:13134772..13134822,+!p2@NFIX!1.22!22.83!NFIX;;chr3:157823517..157823562,-!p1@SHOX2!1.18!15.09!SHOX2;;chr2:45236579..45236596,-!p2@SIX2!1.18!14.26!SIX2;;chr1:170632250..170632277,+!p7@PRRX1!1.17!13.85!PRRX1;;chr4:4861385..4861398,+!p1@MSX1!1.15!38.54!MSX1;;chr1:170633262..170633285,+!p3@PRRX1!1.15!14.88!PRRX1;;chr11:113930425..113930471,+!p1@ZBTB16!1.13!18.08!ZBTB16;;chr3:12329358..12329393,+!p3@PPARG!1.11!29.14!PPARG;;chr8:49833948..49833973,-!p2@SNAI2!1.08!70.88!SNAI2;;chr3:12329397..12329433,+!p2@PPARG!1.08!25.52!PPARG;;chr8:49833978..49833996,-!p1@SNAI2!1.07!222.15!SNAI2;;chr2:95963052..95963106,+!p1@KCNIP3!1.07!10.75!KCNIP3;;chr2:96012397..96012417,+!p3@KCNIP3!1.07!10.75!KCNIP3;;chr16:86600870..86600921,+!p2@FOXC2!1.07!10.75!FOXC2;;chr6:1389824..1389840,+!p3@FOXF2!1.07!10.64!FOXF2;;chr1:25256756..25256774,-!p1@RUNX3!1.05!19.32!RUNX3;;chr6:85474299..85474324,-!p1@TBX18!1.05!18.50!TBX18;;chr7:14029283..14029311,-!p1@ETV1!1.03!52.90!ETV1;;chr7:44143978..44143989,+!p2@AEBP1!1.03!18.08!AEBP1;;chr7:113726357..113726443,+!p1@FOXP2!1.03!16.84!FOXP2;;chr1:170632137..170632172,+!p10@PRRX1!1.02!9.40!PRRX1;;chr9:77112225..77112238,+!p2@RORB!1.02!9.40!RORB;;chr20:42543506..42543549,+!p2@TOX2!1.01!22.53!TOX2;;chr10:28034739..28034756,-!p1@MKX!1.01!9.20!MKX;;chr11:46299539..46299620,+!p2@CREB3L1!1.00!15.60!CREB3L1;;chr2:96012353..96012378,+!p4@KCNIP3!1.00!8.99!KCNIP3;;chr9:102584262..102584276,+!p1@NR4A3!0.99!19.94!NR4A3;;chrX:106960285..106960299,-!p1@TSC22D3!0.98!236.51!TSC22D3;;chr7:14028488..14028516,-!p2@ETV1!0.98!9.40!ETV1;;chr5:92918919..92918942,+!p1@NR2F1!0.97!37.82!NR2F1;;chr21:47063625..47063658,+!p1@PCBP3!0.97!36.99!PCBP3;;chr9:102584159..102584174,+!p2@NR4A3!0.97!15.40!NR4A3;;chr14:37126814..37126834,+!p4@PAX9!0.96!8.16!PAX9;;chr12:115122303..115122314,-!p6@TBX3!0.96!8.06!TBX3;;chr5:158526917..158526932,-!p1@EBF1!0.95!20.15!EBF1;;chr6:85473156..85473210,-!p2@TBX18!0.95!9.82!TBX18;;chr15:57511589..57511608,+!p4@TCF12!0.95!7.85!TCF12;;chr5:321810..321877,+!p1@AHRR!0.94!25.21!AHRR;;chr14:24837368..24837401,+!p1@NFATC4!0.93!18.39!NFATC4;;chr10:31607702..31607755,+!p3@ZEB1!0.93!8.78!ZEB1;;chr9:94186131..94186174,-!p2@NFIL3!0.92!62.00!NFIL3;;chr1:170632115..170632136,+!p9@PRRX1!0.92!7.34!PRRX1;;chr3:141121847..141121868,+!p5@ZBTB38!0.89!10.64!ZBTB38;;chrY:21906594..21906622,-!p1@KDM5D!0.89!6.72!KDM5D;;chr9:94186101..94186122,-!p1@NFIL3!0.88!96.20!NFIL3;;chr17:59477233..59477263,+!p1@TBX2!0.88!21.39!TBX2;;chr1:75600067..75600094,+!p2@LHX8!0.88!6.61!LHX8;;chr8:93074803..93074845,-!p1@RUNX1T1!0.88!6.51!RUNX1T1;;chr17:7492684..7492778,-!p2@SOX15!0.87!13.95!SOX15;;chr12:115121962..115121987,-!p1@TBX3!0.86!55.28!TBX3;;chrY:2803415..2803468,+!p1@ZFY!0.86!6.30!ZFY;;chr1:170632477..170632506,+!p6@PRRX1!0.86!6.30!PRRX1;;chr2:45236648..45236659,-!p5@SIX2!0.86!6.30!SIX2;;chr7:17338266..17338282,+!p1@AHR!0.85!69.85!AHR;;chr8:72756667..72756736,-!p2@MSC!0.85!9.71!MSC;;chrX:66763856..66763896,+!p1@AR!0.85!8.99!AR;;chr2:96012277..96012290,+!p5@KCNIP3!0.85!6.10!KCNIP3;;chr5:92918956..92918969,+!p4@NR2F1!0.84!6.51!NR2F1;;chr18:52969844..52969895,-!p27@TCF4!0.84!5.89!TCF4;;chr1:158969752..158969780,+!p6@IFI16!0.83!10.44!IFI16;;chr8:72756637..72756664,-!p3@MSC!0.83!6.61!MSC;;chr12:85673977..85674015,+!p1@ALX1!0.83!5.79!ALX1;;chr20:55205825..55205847,+!p2@TFAP2C!0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5182458,+!p1@ZFP1!0.18!13.85!ZFP1;;chr19:44669221..44669274,+!p1@ZNF226,p1@ZNF234!0.18!13.74!ZNF226;;chr2:231191875..231191918,+!p1@SP140L!0.18!12.81!SP140L;;chr4:18023350..18023385,-!p1@LCORL!0.18!11.06!LCORL;;chr20:3388238..3388323,-!p1@C20orf194!0.18!8.89!C20orf194;;chr19:9649268..9649298,-!p1@ZNF426!0.18!8.68!ZNF426;;chr6:108880956..108881011,+!p1@FOXO3!0.18!8.37!FOXO3;;chr3:40518599..40518664,+!p1@ZNF619!0.18!7.34!ZNF619;;chr19:15543565..15543579,-!p2@WIZ!0.18!5.27!WIZ;;chr16:2059797..2059837,-!p1@ZNF598!0.18!4.86!ZNF598;;chr16:79634624..79634642,-!p1@MAF!0.18!4.65!MAF;;chr10:38265517..38265591,-!p1@ZNF25!0.18!4.55!ZNF25;;chr21:27107465..27107557,+!p3@GABPA!0.18!4.24!GABPA;;chr10:105110890..105110914,-!p2@PCGF6!0.18!4.13!PCGF6;;chr15:31618903..31618962,+!p3@KLF13!0.18!3.00!KLF13;;chrX:106960221..106960236,-!p3@TSC22D3!0.18!3.00!TSC22D3;;chr20:48807171..48807234,+!p4@CEBPB!0.18!2.17!CEBPB;;chr10:70320074..70320106,+!p1@TET1!0.18!1.96!TET1;;chr19:58666441..58666478,-!p2@ZNF329!0.18!1.55!ZNF329;;chr4:38665753..38665757,+!p7@KLF3!0.18!1.45!KLF3;;chr5:172484377..172484418,+!p2@C5orf41!0.18!1.45!CREBRF;;chr19:58987711..58987729,+!p2@ZNF446!0.18!1.34!ZNF446;;chr20:50721803..50721857,-!p2@ZFP64!0.18!1.34!ZFP64;;chr9:2015275..2015287,+!p8@SMARCA2!0.18!1.34!SMARCA2;;chr16:30582888..30582923,-!p3@ZNF688!0.18!1.34!ZNF688;;chr1:158985493..158985535,+!p4@IFI16!0.18!1.24!IFI16;;chr20:6748325..6748352,+!p1@BMP2!0.18!1.14!BMP2;;chr19:12175504..12175519,+!p2@ZNF844!0.18!1.14!ZNF844;;chr19:50431999..50432026,+!p4@ATF5!0.18!1.03!ATF5;;chr16:29817199..29817222,+!p17@MAZ!0.18!0.93!MAZ;;chr19:37464063..37464127,+!p2@ZNF568!0.18!0.93!ZNF568;;chr3:168865194..168865245,-!p3@MECOM!0.18!0.93!MECOM;;chr4:81104985..81105005,+!p4@PRDM8!0.18!0.83!PRDM8;;chr20:52210338..52210352,-!p4@ZNF217!0.18!0.83!ZNF217;;chr12:66218003..66218018,+!p9@HMGA2!0.18!0.83!HMGA2;;chr5:150284461..150284481,-!p4@ZNF300!0.18!0.83!ZNF300;;chr7:17369649..17369664,+!p4@AHR!0.18!0.83!AHR;;chr17:38465441..38465481,+!p6@RARA!0.18!0.83!RARA;;chr5:124082580..124082603,-!p4@ZNF608!0.18!0.72!ZNF608;;chr12:57853565..57853579,+!p1@GLI1!0.18!0.62!GLI1;;chr12:115121587..115121597,-!p10@TBX3!0.18!0.52!TBX3;;chr5:124084466..124084484,-!p6@ZNF608!0.18!0.52!ZNF608;;chr5:139492456..139492489,+!p7@PURA!0.18!0.52!PURA;;chr5:2751762..2751784,-!p1@IRX2!0.18!0.52!IRX2;;chr5:92919452..92919496,+!p11@NR2F1!0.18!0.52!NR2F1;;chr6:45390137..45390148,+!p12@RUNX2!0.18!0.52!RUNX2;;chr6:50786479..50786490,+!p6@TFAP2B!0.18!0.52!TFAP2B;;chr6:85474219..85474228,-!p10@TBX18!0.18!0.52!TBX18;;chr7:19156632..19156652,-!p3@TWIST1!0.18!0.52!TWIST1;;chr8:93115362..93115391,-!p9@RUNX1T1!0.18!0.52!RUNX1T1;;chr8:93115445..93115462,-!p7@RUNX1T1!0.18!0.52!RUNX1T1;;chr2:157186630..157186686,-!p6@NR4A2!0.18!0.52!NR4A2;;chr2:74726710..74726736,-!p3@LBX2!0.18!0.52!LBX2;;chr3:114343870..114343887,-!p9@ZBTB20!0.18!0.52!ZBTB20;;chr3:141087562..141087594,+!p12@ZBTB38!0.18!0.52!ZBTB38;;chr3:141103634..141103665,+!p18@ZBTB38!0.18!0.52!ZBTB38;;chr3:147111198..147111225,+!p4@ZIC1!0.18!0.52!ZIC1;;chr4:103423079..103423112,+!p4@NFKB1!0.18!0.52!NFKB1;;chr1:170633194..170633205,+!p18@PRRX1!0.18!0.52!PRRX1;;chr15:31658288..31658338,+!p4@KLF13!0.18!0.52!KLF13;;chr15:67418177..67418204,+!p9@SMAD3!0.18!0.52!SMAD3;;chr16:51185172..51185197,-!p1@SALL1!0.18!0.52!SALL1;;chr16:54319010..54319041,-!p8@IRX3!0.18!0.52!IRX3;;chr17:40440359..40440386,+!p4@STAT5A!0.18!0.52!STAT5A;;chr17:7387459..7387470,-!p10@ZBTB4!0.18!0.52!ZBTB4;;chr17:74137321..74137337,-!p1@FOXJ1!0.18!0.52!FOXJ1;;
+|ffid_belonging_in_development=CL:0000134
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:11394-118C8: Difference between revisions

From FANTOM5_SSTAR

Revision as of 20:53, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0