FF:11574-120E8: Difference between revisions

Revision as of 21:28, 9 July 2012

Name:	Neurons, donor2
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	brain
dev stage	NA
sex	NA
age	NA
cell type	neuron
cell line	NA
company	Sciencell/3H
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	3153
catalog number	SC1525
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0.369
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.106
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.187
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0.0673
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.0283
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0.0673
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.011
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.316
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.0507
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	1.099
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.0562
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.299
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0.125
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.0016
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0.0673
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0.0673
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.012
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.12
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.365
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.177
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.0673
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0.125
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.0673
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12726

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	5.908e-5
MA0003.1	MA0003.1	0.162
MA0004.1	MA0004.1	0.522
MA0006.1	MA0006.1	0.415
MA0007.1	MA0007.1	0.164
MA0009.1	MA0009.1	0.197
MA0014.1	MA0014.1	0.717
MA0017.1	MA0017.1	0.00251
MA0018.2	MA0018.2	0.00423
MA0019.1	MA0019.1	0.882
MA0024.1	MA0024.1	0.00413
MA0025.1	MA0025.1	0.509
MA0027.1	MA0027.1	0.138
MA0028.1	MA0028.1	0.945
MA0029.1	MA0029.1	0.0619
MA0030.1	MA0030.1	0.594
MA0031.1	MA0031.1	0.0882
MA0035.2	MA0035.2	0.0542
MA0038.1	MA0038.1	1.68336e-5
MA0039.2	MA0039.2	0.213
MA0040.1	MA0040.1	0.716
MA0041.1	MA0041.1	0.547
MA0042.1	MA0042.1	0.712
MA0043.1	MA0043.1	0.254
MA0046.1	MA0046.1	0.524
MA0047.2	MA0047.2	0.00491
MA0048.1	MA0048.1	0.659
MA0050.1	MA0050.1	3.71735e-7
MA0051.1	MA0051.1	0.0074
MA0052.1	MA0052.1	0.385
MA0055.1	MA0055.1	0.247
MA0057.1	MA0057.1	0.266
MA0058.1	MA0058.1	0.432
MA0059.1	MA0059.1	0.216
MA0060.1	MA0060.1	5.67641e-7
MA0061.1	MA0061.1	0.027
MA0062.2	MA0062.2	0.574
MA0065.2	MA0065.2	4.92644e-4
MA0066.1	MA0066.1	0.0534
MA0067.1	MA0067.1	0.664
MA0068.1	MA0068.1	0.00178
MA0069.1	MA0069.1	0.399
MA0070.1	MA0070.1	0.0122
MA0071.1	MA0071.1	0.07
MA0072.1	MA0072.1	0.748
MA0073.1	MA0073.1	0.453
MA0074.1	MA0074.1	0.208
MA0076.1	MA0076.1	0.361
MA0077.1	MA0077.1	0.0281
MA0078.1	MA0078.1	0.344
MA0079.2	MA0079.2	0.618
MA0080.2	MA0080.2	1.30342e-9
MA0081.1	MA0081.1	0.0676
MA0083.1	MA0083.1	0.994
MA0084.1	MA0084.1	0.117
MA0087.1	MA0087.1	0.677
MA0088.1	MA0088.1	0.381
MA0090.1	MA0090.1	0.105
MA0091.1	MA0091.1	0.47
MA0092.1	MA0092.1	0.873
MA0093.1	MA0093.1	0.58
MA0099.2	MA0099.2	1.23665e-9
MA0100.1	MA0100.1	0.297
MA0101.1	MA0101.1	0.0157
MA0102.2	MA0102.2	0.0208
MA0103.1	MA0103.1	0.096
MA0104.2	MA0104.2	0.805
MA0105.1	MA0105.1	0.0151
MA0106.1	MA0106.1	0.0546
MA0107.1	MA0107.1	0.0231
MA0108.2	MA0108.2	0.023
MA0111.1	MA0111.1	0.532
MA0112.2	MA0112.2	1.28981e-4
MA0113.1	MA0113.1	0.081
MA0114.1	MA0114.1	0.0124
MA0115.1	MA0115.1	0.16
MA0116.1	MA0116.1	0.0242
MA0117.1	MA0117.1	0.775
MA0119.1	MA0119.1	0.103
MA0122.1	MA0122.1	0.399
MA0124.1	MA0124.1	0.542
MA0125.1	MA0125.1	0.0201
MA0131.1	MA0131.1	0.707
MA0135.1	MA0135.1	0.00146
MA0136.1	MA0136.1	9.67278e-7
MA0137.2	MA0137.2	0.424
MA0138.2	MA0138.2	0.252
MA0139.1	MA0139.1	0.353
MA0140.1	MA0140.1	0.00454
MA0141.1	MA0141.1	0.00634
MA0142.1	MA0142.1	0.0193
MA0143.1	MA0143.1	0.0376
MA0144.1	MA0144.1	0.209
MA0145.1	MA0145.1	0.162
MA0146.1	MA0146.1	0.00759
MA0147.1	MA0147.1	0.631
MA0148.1	MA0148.1	0.0167
MA0149.1	MA0149.1	0.00384
MA0150.1	MA0150.1	2.50571e-4
MA0152.1	MA0152.1	0.336
MA0153.1	MA0153.1	0.537
MA0154.1	MA0154.1	0.045
MA0155.1	MA0155.1	0.663
MA0156.1	MA0156.1	4.10774e-4
MA0157.1	MA0157.1	0.0277
MA0159.1	MA0159.1	0.00206
MA0160.1	MA0160.1	0.0212
MA0162.1	MA0162.1	0.271
MA0163.1	MA0163.1	4.3358e-5
MA0164.1	MA0164.1	0.568
MA0258.1	MA0258.1	0.00754
MA0259.1	MA0259.1	0.987

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12726

Novel motif	Logo	P-value
1	1	0.0642
10	10	0.0722
100	100	0.58
101	101	0.638
102	102	0.973
103	103	0.249
104	104	0.206
105	105	0.297
106	106	0.014
107	107	0.0806
108	108	0.784
109	109	0.0033
11	11	0.0314
110	110	0.214
111	111	0.0859
112	112	0.0938
113	113	0.938
114	114	0.00996
115	115	0.814
116	116	0.368
117	117	0.0297
118	118	0.191
119	119	0.105
12	12	0.802
120	120	0.816
121	121	0.432
122	122	0.947
123	123	0.767
124	124	0.195
125	125	0.809
126	126	0.00845
127	127	0.267
128	128	0.156
129	129	0.434
13	13	0.00813
130	130	0.831
131	131	0.9
132	132	0.956
133	133	0.221
134	134	0.493
135	135	0.615
136	136	0.0117
137	137	0.557
138	138	0.51
139	139	0.0361
14	14	0.803
140	140	0.257
141	141	0.487
142	142	0.978
143	143	0.0155
144	144	0.43
145	145	0.512
146	146	0.814
147	147	0.732
148	148	0.0221
149	149	0.125
15	15	0.0914
150	150	0.254
151	151	0.363
152	152	0.0288
153	153	0.87
154	154	0.837
155	155	0.255
156	156	0.649
157	157	0.662
158	158	0.566
159	159	0.824
16	16	0.0589
160	160	0.131
161	161	0.0976
162	162	0.749
163	163	0.22
164	164	0.0093
165	165	0.813
166	166	0.674
167	167	0.258
168	168	0.298
169	169	0.00589
17	17	0.0616
18	18	0.344
19	19	0.131
2	2	0.558
20	20	0.5
21	21	0.11
22	22	0.123
23	23	0.0965
24	24	0.18
25	25	0.578
26	26	0.0144
27	27	0.576
28	28	0.782
29	29	0.0482
3	3	0.0378
30	30	0.967
31	31	0.884
32	32	0.0274
33	33	0.348
34	34	0.69
35	35	0.631
36	36	0.257
37	37	0.0236
38	38	0.225
39	39	0.203
4	4	0.606
40	40	0.112
41	41	0.566
42	42	0.207
43	43	0.127
44	44	0.0948
45	45	0.667
46	46	0.172
47	47	0.138
48	48	0.0937
49	49	0.14
5	5	0.233
50	50	0.325
51	51	0.423
52	52	0.371
53	53	0.614
54	54	0.273
55	55	0.187
56	56	0.321
57	57	0.255
58	58	0.164
59	59	0.0352
6	6	0.829
60	60	0.0522
61	61	0.0255
62	62	0.121
63	63	0.117
64	64	0.45
65	65	0.17
66	66	0.942
67	67	0.77
68	68	0.459
69	69	0.367
7	7	0.13
70	70	0.0535
71	71	0.015
72	72	0.396
73	73	0.0156
74	74	0.715
75	75	0.0346
76	76	0.367
77	77	0.11
78	78	0.00482
79	79	0.162
8	8	0.0963
80	80	0.722
81	81	0.549
82	82	0.175
83	83	0.458
84	84	0.94
85	85	0.042
86	86	0.24
87	87	0.0514
88	88	0.546
89	89	0.358
9	9	0.379
90	90	0.426
91	91	0.366
92	92	0.129
93	93	0.645
94	94	0.132
95	95	0.0168
96	96	0.816
97	97	0.816
98	98	0.174
99	99	0.669

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12726

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000348 human neuron samples

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000540 (neuron)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0002319 (neural cell)
0000393 (electrically responsive cell)
0000211 (electrically active cell)
0000404 (electrically signaling cell)
0000255 (eukaryotic cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000348 (human neuron samples)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000133 (neurectodermal cell)
CL:0000031 (neuroblast)
CL:0000221 (ectodermal cell)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr17:37764128..37764258,-!p1@NEUROD2!2.66!451.62!NEUROD2;;chr7:31380292..31380351,-!p1@NEUROD6!2.47!294.33!NEUROD6;;chr1:244214577..244214593,+!p1@ZNF238!2.47!291.31!ZNF238;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!2.44!275.73!POU3F3;;chr14:29235961..29236008,+!p1@FOXG1!2.41!258.98!FOXG1;;chr1:151032922..151032951,+!p2@MLLT11!2.25!285.95!MLLT11;;chr14:29236269..29236285,+!p3@FOXG1!2.13!132.67!FOXG1;;chr2:5832508..5832524,+!p1@SOX11!2.11!127.98!SOX11;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!2.08!118.10!POU3F3;;chr3:181429704..181429722,+!p1@SOX2!2.03!105.70!SOX2;;chrX:25034067..25034088,-!p1@ARX!1.93!84.93!ARX;;chr4:81118647..81118666,+!p1@PRDM8!1.90!101.51!PRDM8;;chr2:200322229..200322251,-!p3@SATB2!1.89!76.72!SATB2;;chr4:57547454..57547469,-!p1@HOPX!1.87!72.87!HOPX;;chr14:29234581..29234601,+!p2@FOXG1!1.86!71.70!FOXG1;;chr2:5832493..5832507,+!p2@SOX11!1.86!71.36!SOX11;;chr1:151032860..151032918,+!p1@MLLT11!1.85!772.42!MLLT11;;chr2:162272785..162272836,+!p1@TBR1!1.85!70.19!TBR1;;chr20:20348740..20348757,+!p1@INSM1!1.84!67.84!INSM1;;chr19:13134772..13134822,+!p2@NFIX!1.79!88.28!NFIX;;chr8:65492756..65492768,+!p2@BHLHE22!1.78!58.97!BHLHE22;;chr7:96654133..96654150,-!p1@DLX5!1.74!54.11!DLX5;;chr2:16080659..16080685,+!p1@MYCN!1.69!47.91!MYCN;;chr2:60780607..60780624,-!p2@BCL11A!1.68!140.21!BCL11A;;chr9:126774018..126774055,+!p1@LHX2!1.66!44.73!LHX2;;chr1:151032957..151032968,+!p7@MLLT11!1.64!42.72!MLLT11;;chr19:38720294..38720348,-!p1@DPF1!1.63!51.93!DPF1;;chr7:100065686..100065701,-!p2@TSC22D4!1.63!42.05!TSC22D4;;chr3:181429741..181429767,+!p2@SOX2!1.63!41.88!SOX2;;chr2:2334997..2335053,-!p1@MYT1L!1.63!41.38!MYT1L;;chr2:172967621..172967637,-!p1@DLX2!1.62!105.70!DLX2;;chr2:162272889..162272915,+!p2@TBR1!1.58!37.19!TBR1;;chr19:47523058..47523114,+!p1@NPAS1!1.57!36.52!NPAS1;;chr1:244214611..244214624,+!p4@ZNF238!1.55!34.84!ZNF238;;chrX:82763292..82763317,+!p1@POU3F4!1.52!31.83!POU3F4;;chr2:172950227..172950249,+!p2@DLX1!1.49!29.82!DLX1;;chr2:239148671..239148686,-!p1@HES6!1.47!101.51!HES6;;chr12:103351444..103351461,+!p1@ASCL1!1.47!28.48!ASCL1;;chr2:200322723..200322739,-!p6@SATB2!1.47!28.31!SATB2;;chr6:21594206..21594221,+!p15@SOX4!1.43!26.13!SOX4;;chr4:113437332..113437337,-!p1@NEUROG2!1.42!25.29!NEUROG2;;chr6:19837592..19837621,+!p1@ID4!1.41!145.24!ID4;;chr19:13135582..13135600,+!p3@NFIX!1.41!24.79!NFIX;;chr9:126773880..126773895,+!p2@LHX2!1.41!24.62!LHX2;;chr14:29237009..29237049,+!p4@FOXG1!1.41!24.46!FOXG1;;chr15:57511609..57511651,+!p2@TCF12!1.40!40.20!TCF12;;chr5:88178983..88179012,-!p1@MEF2C!1.39!175.05!MEF2C;;chr2:172949484..172949522,+!p1@DLX1!1.39!23.28!DLX1;;chr2:2335109..2335134,-!p2@MYT1L!1.38!23.12!MYT1L;;chr14:29236301..29236317,+!p5@FOXG1!1.38!22.95!FOXG1;;chrX:84498989..84499003,+!p1@ZNF711!1.36!29.99!ZNF711;;chr2:166326200..166326216,+!p1@CSRNP3!1.35!31.16!CSRNP3;;chr2:105470614..105470625,+!p@chr2:105470614..105470625,+!1.34!20.77!POU3F3;;chr1:23696348..23696363,-!p4@ZNF436!1.32!22.28!ZNF436;;chr12:24102576..24102623,-!p2@SOX5!1.32!20.10!SOX5;;chr14:33403881..33403924,+!p1@NPAS3!1.31!19.60!NPAS3;;chr2:175199675..175199688,+!p1@SP9!1.31!19.43!SP9;;chr18:53069419..53069450,-!p34@TCF4!1.30!18.93!TCF4;;chr12:111471526..111471541,+!p1@CUX2!1.30!18.76!CUX2;;chr9:14308004..14308041,-!p14@NFIB!1.30!18.76!NFIB;;chr6:21593973..21593988,+!p1@SOX4!1.29!642.59!SOX4;;chr5:92918768..92918783,+!p8@NR2F1!1.28!17.92!NR2F1;;chr11:63684602..63684664,-!p1@RCOR2!1.27!34.68!RCOR2;;chr18:52989001..52989030,-!p10@TCF4!1.27!19.26!TCF4;;chr20:657284..657307,-!p1@SCRT2!1.27!17.59!SCRT2;;chr6:99282438..99282457,+!p2@POU3F2!1.27!17.59!POU3F2;;chr10:118897911..118897974,-!p1@VAX1!1.26!17.25!VAX1;;chr6:99282475..99282501,+!p1@POU3F2!1.23!16.08!POU3F2;;chr9:20621927..20621996,-!p3@MLLT3!1.22!26.13!MLLT3;;chr5:92919100..92919135,+!p3@NR2F1!1.22!18.76!NR2F1;;chr2:200320768..200320800,-!p4@SATB2!1.22!15.41!SATB2;;chr2:200322259..200322280,-!p5@SATB2!1.22!15.41!SATB2;;chr18:52989031..52989079,-!p2@TCF4!1.21!35.35!TCF4;;chr6:21594252..21594285,+!p11@SOX4!1.21!16.92!SOX4;;chr2:162272716..162272753,+!p3@TBR1!1.21!15.24!TBR1;;chr2:105470599..105470610,+!p@chr2:105470599..105470610,+!1.21!15.08!POU3F3;;chr4:57547820..57547829,-!p8@HOPX!1.21!15.08!HOPX;;chr16:51185172..51185197,-!p1@SALL1!1.20!14.91!SALL1;;chr14:73360799..73360817,-!p1@DPF3!1.19!49.75!DPF3;;chr2:182545234..182545252,-!p1@NEUROD1!1.19!14.41!NEUROD1;;chr11:31832862..31832884,-!p2@PAX6!1.18!14.07!PAX6;;chr2:145277882..145277967,-!p3@ZEB2!1.17!23.79!ZEB2;;chr2:166428839..166428859,+!p2@CSRNP3!1.17!13.90!CSRNP3;;chr18:52988979..52988993,-!p18@TCF4!1.17!13.90!TCF4;;chr1:244214655..244214666,+!p7@ZNF238!1.17!13.90!ZNF238;;chr14:58798013..58798071,+!p2@ARID4A!1.17!13.74!ARID4A;;chr15:37392724..37392757,-!p1@MEIS2!1.16!61.65!MEIS2;;chr6:99282592..99282616,+!p3@POU3F2!1.16!13.57!POU3F2;;chr8:93107451..93107468,-!p2@RUNX1T1!1.16!13.40!RUNX1T1;;chr4:57547751..57547764,-!p6@HOPX!1.16!13.40!HOPX;;chr9:124991204..124991246,-!p1@LHX6!1.16!13.40!LHX6;;chr17:7492684..7492778,-!p2@SOX15!1.15!27.81!SOX15;;chrX:84499081..84499115,+!p2@ZNF711!1.15!19.10!ZNF711;;chr2:145275982..145276003,-!p7@ZEB2!1.15!13.07!ZEB2;;chr2:60781201..60781258,-!p3@BCL11A!1.15!13.07!BCL11A;;chr4:57522598..57522664,-!p3@HOPX!1.15!13.07!HOPX;;chr1:41827095..41827155,+!p1@FOXO6!1.13!16.92!FOXO6;;chr18:53068911..53068935,-!p4@TCF4!1.13!14.24!TCF4;;chr9:126774058..126774081,+!p3@LHX2!1.13!12.40!LHX2;;chr5:124082322..124082364,-!p1@ZNF608!1.12!31.49!ZNF608;;chr15:80696703..80696754,+!p1@ARNT2!1.11!15.91!ARNT2;;chr8:65492915..65492932,+!p1@BHLHE22!1.11!11.89!BHLHE22;;chr2:200322654..200322707,-!p2@SATB2!1.10!17.09!SATB2;;chr15:37392094..37392116,-!p6@MEIS2!1.10!14.41!MEIS2;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.10!11.56!PEG3;;chr5:124081979..124082021,-!p7@ZNF608!1.10!11.56!ZNF608;;chr18:56532100..56532130,+!p1@ZNF532!1.09!21.11!ZNF532;;chr18:52988952..52988965,-!p23@TCF4!1.09!11.39!TCF4;;chr18:53089453..53089482,-!p11@TCF4!1.09!11.39!TCF4;;chr6:21597765..21597779,+!p2@SOX4!1.08!88.78!SOX4;;chr1:244219392..244219409,+!p5@ZNF238!1.08!10.89!ZNF238;;chr5:92918919..92918942,+!p1@NR2F1!1.06!47.24!NR2F1;;chr2:25475120..25475176,-!p2@DNMT3A!1.06!14.07!DNMT3A;;chr8:80679993..80680011,-!p1@HEY1!1.04!14.74!HEY1;;chr7:20826504..20826526,-!p1@SP8!1.04!9.88!SP8;;chr14:29236169..29236216,+!p6@FOXG1!1.04!9.88!FOXG1;;chr2:200325204..200325243,-!p7@SATB2!1.04!9.88!SATB2;;chr2:63277948..63277974,+!p1@OTX1!1.04!9.88!OTX1;;chr5:178368186..178368238,+!p1@ZNF454!1.03!17.42!ZNF454;;chr7:150945663..150945692,-!p5@SMARCD3!1.03!9.72!SMARCD3;;chr3:114173720..114173794,-!p6@ZBTB20!1.03!9.72!ZBTB20;;chr9:14314131..14314147,-!p2@NFIB!1.02!54.28!NFIB;;chr19:13134457..13134462,+!p5@NFIX!1.02!17.09!NFIX;;chr5:124082279..124082319,-!p3@ZNF608!1.02!11.56!ZNF608;;chr21:34398234..34398250,+!p1@OLIG2!1.02!9.38!OLIG2;;chr7:150974206..150974255,-!p1@SMARCD3!1.01!58.13!SMARCD3;;chr19:19976683..19976709,+!p1@ZNF253!1.01!41.71!ZNF253;;chr3:141105705..141105770,+!p4@ZBTB38!1.01!11.22!ZBTB38;;chr5:150284420..150284443,-!p2@ZNF300!0.99!17.59!ZNF300;;chr1:244219038..244219054,+!p3@ZNF238!0.99!11.89!ZNF238;;chr2:60780580..60780590,-!p9@BCL11A!0.99!8.88!BCL11A;;chr8:93107696..93107716,-!p8@RUNX1T1!0.99!8.88!RUNX1T1;;chr2:200322711..200322722,-!p10@SATB2!0.99!8.71!SATB2;;chr17:70117153..70117174,+!p1@SOX9!0.98!91.13!SOX9;;chr18:53069389..53069416,-!p40@TCF4!0.98!8.54!TCF4;;chr19:13135731..13135787,+!p10@NFIX!0.97!8.38!NFIX;;chr19:58545454..58545498,+!p1@ZSCAN1!0.97!8.38!ZSCAN1;;chr2:60780753..60780800,-!p1@BCL11A!0.96!41.38!BCL11A;;chrX:82763265..82763283,+!p2@POU3F4!0.96!8.21!POU3F4;;chr8:40755333..40755352,-!p1@ZMAT4!0.96!8.21!ZMAT4;;chr13:95364784..95364806,-!p1@SOX21!0.96!8.21!SOX21;;chr16:71918033..71918101,-!p1@ZNF821!0.95!30.32!ZNF821;;chr1:38512457..38512474,-!p1@POU3F1!0.95!8.71!POU3F1;;chr11:31832658..31832681,-!p1@PAX6!0.95!7.87!PAX6;;chr9:14082760..14082775,-!p6@NFIB!0.94!12.90!NFIB;;chr9:20622444..20622468,-!p2@MLLT3!0.93!25.13!MLLT3;;chr18:53257027..53257052,-!p3@TCF4!0.92!30.66!TCF4;;chr5:92919068..92919082,+!p5@NR2F1!0.92!8.88!NR2F1;;chr2:73144617..73144654,+!p1@EMX1!0.92!7.37!EMX1;;chr4:57522513..57522548,-!p4@HOPX!0.91!7.04!HOPX;;chr6:108487289..108487302,+!p1@NR2E1!0.91!7.04!NR2E1;;chr21:34442439..34442455,+!p1@OLIG1!0.91!7.04!OLIG1;;chr9:20621834..20621884,-!p5@MLLT3!0.91!7.04!MLLT3;;chr2:145277640..145277771,-!p1@ZEB2!0.90!98.50!ZEB2;;chr9:14314566..14314618,-!p1@NFIB!0.90!86.77!NFIB;;chr9:14083467..14083483,-!p4@NFIB!0.90!17.59!NFIB;;chr19:47922750..47922795,-!p1@MEIS3!0.90!11.73!MEIS3;;chr2:60780516..60780526,-!p11@BCL11A!0.90!6.87!BCL11A;;chr6:99282570..99282591,+!p4@POU3F2!0.90!6.87!POU3F2;;chr11:31839488..31839515,-!p3@PAX6!0.90!6.87!PAX6;;chr19:58220517..58220583,-!p1@ZNF154!0.89!22.45!ZNF154;;chr6:28411241..28411284,-!p1@ZSCAN23!0.89!22.45!ZSCAN23;;chr7:31380502..31380515,-!p3@NEUROD6!0.89!6.70!NEUROD6;;chr11:66188503..66188511,+!p1@NPAS4!0.89!6.70!NPAS4;;chrX:84499056..84499078,+!p3@ZNF711!0.89!6.70!ZNF711;;chrX:139587228..139587234,-!p1@SOX3!0.89!6.70!SOX3;;chr16:30406423..30406447,+!p4@ZNF48!0.89!6.70!ZNF48;;chr10:119302232..119302265,+!p1@EMX2!0.88!6.53!EMX2;;chr11:125034640..125034655,+!p1@PKNOX2!0.88!6.53!PKNOX2;;chr2:2335070..2335098,-!p4@MYT1L!0.88!6.53!MYT1L;;chr1:2985760..2985774,+!p1@PRDM16!0.88!6.53!PRDM16;;chr1:23696308..23696339,-!p2@ZNF436!0.87!14.07!ZNF436;;chr9:14313893..14313908,-!p7@NFIB!0.87!9.38!NFIB;;chr9:109625401..109625458,+!p1@ZNF462!0.86!17.09!ZNF462;;chr18:53257001..53257015,-!p5@TCF4!0.86!11.22!TCF4;;chr7:31380440..31380451,-!p4@NEUROD6!0.86!6.20!NEUROD6;;chr2:145275947..145275981,-!p10@ZEB2!0.86!6.20!ZEB2;;chr2:166428861..166428883,+!p3@CSRNP3!0.86!6.20!CSRNP3;;chr2:60780546..60780555,-!p10@BCL11A!0.86!6.20!BCL11A;;chr16:79634624..79634642,-!p1@MAF!0.85!25.29!MAF;;chr13:72441315..72441454,-!p1@DACH1!0.85!12.56!DACH1;;chr1:158969752..158969780,+!p6@IFI16!0.85!11.06!IFI16;;chr3:33482052..33482116,-!p2@UBP1!0.85!9.72!UBP1;;chr2:16080635..1608065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chr14:33403779..33403793,+!p6@NPAS3!0.34!1.17!NPAS3;;chr19:58790361..58790372,+!p2@ZNF8!0.34!1.17!ZNF8;;chr1:216896752..216896778,-!p1@ESRRG!0.34!1.17!ESRRG;;chr1:217262933..217262968,-!p3@ESRRG!0.34!1.17!ESRRG;;chr20:21494684..21494708,-!p1@NKX2-2!0.34!1.17!NKX2-2;;chr20:62796052..62796067,+!p5@MYT1!0.34!1.17!MYT1;;chr20:656893..656902,-!p8@SCRT2!0.34!1.17!SCRT2;;chr15:57511589..57511608,+!p4@TCF12!0.34!1.17!TCF12;;chr18:53255349..53255358,-!p29@TCF4!0.34!1.17!TCF4;;chr18:53255379..53255382,-!p45@TCF4!0.34!1.17!TCF4;;chr5:150080543..150080664,-!p1@RBM22!0.33!81.75!RBM22;;chr19:24216213..24216314,+!p1@ZNF254!0.33!33.34!ZNF254;;chr19:8579030..8579061,-!p1@ZNF414!0.33!30.82!ZNF414;;chr14:21566731..21566836,-!p1@ZNF219!0.33!20.10!ZNF219;;chr19:53400852..53400962,-!p1@ZNF320!0.33!18.76!ZNF320;;chr19:7069690..7069726,+!p1@ZNF557!0.33!17.42!ZNF557;;chr16:89284104..89284150,+!p1@ZNF778!0.33!13.07!ZNF778;;chr6:143266297..143266356,-!p1@HIVEP2!0.33!8.71!HIVEP2;;chr6:44355257..44355315,+!p2@CDC5L!0.33!8.21!CDC5L;;chr16:71496112..71496160,-!p1@ZNF23!0.33!8.21!ZNF23;;chr9:125693757..125693818,-!p1@ZBTB26!0.33!8.04!ZBTB26;;chr2:242576641..242576731,-!p2@THAP4!0.33!6.87!THAP4;;chr12:104531854..104531893,-!p2@NFYB!0.33!6.37!NFYB;;chr4:10458982..10459007,-!p2@ZNF518B!0.33!5.70!ZNF518B;;chr1:44679159..44679189,+!p2@DMAP1!0.33!4.69!DMAP1;;chr19:52674898..52674931,-!p3@ZNF836!0.33!3.52!ZNF836;;chr17:42297282..42297300,-!p9@UBTF!0.33!2.68!UBTF;;chr18:56530136..56530199,+!p3@ZNF532!0.33!2.18!ZNF532;;chr19:12175504..12175519,+!p2@ZNF844!0.33!2.01!ZNF844;;chr5:178450829..178450853,+!p2@ZNF879!0.33!2.01!ZNF879;;chrX:56258811..56258838,+!p2@KLF8!0.33!1.84!KLF8;;chr18:52989565..52989623,-!p9@TCF4!0.33!1.68!TCF4;;chr12:133614119..133614136,+!p5@ZNF84!0.33!1.51!ZNF84;;chr7:14028488..14028516,-!p2@ETV1!0.33!1.34!ETV1;;chr15:77197781..77197801,-!p3@SCAPER!0.33!1.34!SCAPER;;chr19:20748620..20748630,-!p3@ZNF737!0.33!1.34!ZNF737;;chr3:21792585..21792625,-!p2@ZNF385D!0.33!1.34!ZNF385D;;chr19:13106214..13106382,+!p1@NFIX!0.32!43.22!NFIX;;chr15:57025675..57025718,-!p1@ZNF280D!0.32!40.20!ZNF280D;;chr16:69419871..69419927,-!p1@TERF2!0.32!24.96!TERF2;;chr12:133532864..133532899,-!p1@ZNF605!0.32!13.23!ZNF605;;chr19:53898380..53898422,+!p1@ZNF765!0.32!11.06!ZNF765;;chr19:58258167..58258201,+!p1@ZNF776!0.32!10.72!ZNF776;;chr19:53836985..53837024,+!p1@ZNF845!0.32!8.71!ZNF845;;chr1:151431647..151431669,-!p2@POGZ!0.32!8.71!POGZ;;chr9:125667618..125667678,-!p2@RC3H2!0.32!7.87!RC3H2;;chr19:44576296..44576343,+!p2@ZNF284!0.32!6.70!ZNF284;;chr6:43337180..43337244,-!p1@ZNF318!0.32!6.70!ZNF318;;chr4:83821835..83821896,+!p1@THAP9!0.32!5.36!THAP9;;chr16:30597000..30597068,-!p1@ZNF785!0.32!4.19!ZNF785;;chr20:49547731..49547753,-!p4@ADNP!0.32!4.02!ADNP;;chr7:21467642..21467671,+!p2@SP4!0.32!3.52!SP4;;chr12:104531823..104531849,-!p5@NFYB!0.32!3.18!NFYB;;chr1:23857698..23857733,-!p1@E2F2!0.32!2.68!E2F2;;chr19:2841497..2841523,+!p2@ZNF555!0.32!2.68!ZNF555;;chr2:121493492..121493537,+!p2@GLI2!0.32!2.35!GLI2;;chr9:102584241..102584261,+!p4@NR4A3!0.32!2.18!NR4A3;;chr18:53257068..53257086,-!p12@TCF4!0.32!1.84!TCF4;;chr20:42136308..42136358,+!p2@L3MBTL1!0.32!1.68!L3MBTL;;chr6:130339753..130339762,+!p2@L3MBTL3!0.32!1.51!L3MBTL3;;chr7:150065733..150065752,+!p4@REPIN1,p4@ZNF775!0.32!1.51!ZNF775;;chr1:23886132..23886156,-!p2@ID3!0.32!1.34!ID3;;chr7:74072021..74072119,+!p1@GTF2I!0.31!47.91!GTF2I;;chr5:132299313..132299334,-!p1@AFF4!0.31!35.18!AFF4;;chr1:53018743..53018777,-!p1@ZCCHC11!0.31!31.33!ZCCHC11;;chr8:37963028..37963070,+!p1@ASH2L!0.31!29.15!ASH2L;;chr6:41514078..41514158,+!p1@FOXP4!0.31!16.08!FOXP4;;chr1:44679113..44679152,+!p1@DMAP1!0.31!14.07!DMAP1;;chr1:28995258..28995322,+!p1@GMEB1!0.31!13.40!GMEB1;;chr16:2273645..2273671,+!p2@E4F1!0.31!8.88!E4F1;;chr16:31085514..31085576,-!p1@ZNF668!0.31!7.04!ZNF668;;chr19:37407212..37407280,+!p1@ZNF568!0.31!6.70!ZNF568;;chrX:101186981..101187030,-!p1@ZMAT1!0.31!5.36!ZMAT1;;
+|ffid_belonging_in_development=CL:0000133,CL:0000031,CL:0000221
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:11574-120E8: Difference between revisions

From FANTOM5_SSTAR

Revision as of 21:28, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0