FFCP PHASE1:Mm9::chr6:78417835..78417870,-: Difference between revisions
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|id=chr6:78417835..78417870,- | |id=chr6:78417835..78417870,- | ||
|ontology_enrichment_celltype=CL:0002563!1.11e-19!9;CL:0002251!1.11e-19!9;CL:0002076!1.39e-19!15;CL:0000066!8.70e-18!25;CL:0000239!1.60e-14!6;CL:0000677!1.60e-14!6;CL:0000212!1.60e-14!6;CL:0000584!1.60e-14!6;CL:0000223!5.25e-14!20;CL:0000075!2.50e-12!7;CL:0000473!2.14e-08!3;CL:0000627!2.14e-08!3;CL:0000682!2.14e-08!3;CL:0000068!5.32e-07!3;CL:0002202!5.32e-07!3;CL:0000069!5.32e-07!3;CL:0002632!5.32e-07!3;CL:0002368!5.32e-07!3;CL:0000307!5.32e-07!3;CL:0000377!5.32e-07!3;CL:0002250!9.07e-07!3 | |ontology_enrichment_celltype=CL:0002563!1.11e-19!9;CL:0002251!1.11e-19!9;CL:0002076!1.39e-19!15;CL:0000066!8.70e-18!25;CL:0000239!1.60e-14!6;CL:0000677!1.60e-14!6;CL:0000212!1.60e-14!6;CL:0000584!1.60e-14!6;CL:0000223!5.25e-14!20;CL:0000075!2.50e-12!7;CL:0000473!2.14e-08!3;CL:0000627!2.14e-08!3;CL:0000682!2.14e-08!3;CL:0000068!5.32e-07!3;CL:0002202!5.32e-07!3;CL:0000069!5.32e-07!3;CL:0002632!5.32e-07!3;CL:0002368!5.32e-07!3;CL:0000307!5.32e-07!3;CL:0000377!5.32e-07!3;CL:0002250!9.07e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.62e-24,6;CL:0000677,2.62e-24,6;CL:0000584,2.62e-24,6;CL:0000075,8.92e-21,7;CL:0002563,4.64e-16,9;CL:0002251,4.64e-16,9;CL:0000682,1.50e-13,3;CL:0000066,3.12e-12,25;CL:0002076,1.95e-09,15;CL:0000223,6.07e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.94e-33!15;UBERON:0001242!1.08e-28!13;UBERON:0000060!1.08e-28!13;UBERON:0001262!1.08e-28!13;UBERON:0004786!1.08e-28!13;UBERON:0003350!1.11e-19!9;UBERON:0004808!1.11e-19!9;UBERON:0001277!1.11e-19!9;UBERON:0004923!3.16e-19!24;UBERON:0000160!1.86e-17!43;UBERON:0000485!8.97e-16!11;UBERON:0005409!2.23e-11!59;UBERON:0001007!3.05e-11!128;UBERON:0001555!3.05e-11!128;UBERON:0007026!3.05e-11!128;UBERON:0004119!5.89e-11!130;UBERON:0000925!5.89e-11!130;UBERON:0006595!5.89e-11!130;UBERON:0004921!1.72e-09!126;UBERON:0004185!1.72e-09!126;UBERON:0000331!1.62e-08!3;UBERON:0002116!1.62e-08!3;UBERON:0001204!1.62e-08!3;UBERON:0001168!1.62e-08!3;UBERON:0005178!2.42e-08!17;UBERON:0005181!2.42e-08!17;UBERON:0002224!2.42e-08!17;UBERON:0000915!2.42e-08!17;UBERON:0008947!2.42e-08!17;UBERON:0003258!2.42e-08!17;UBERON:0003126!5.32e-07!3;UBERON:0001005!5.32e-07!3;UBERON:0007196!5.32e-07!3;UBERON:0001558!5.32e-07!3 | |ontology_enrichment_uberon=UBERON:0000344!4.94e-33!15;UBERON:0001242!1.08e-28!13;UBERON:0000060!1.08e-28!13;UBERON:0001262!1.08e-28!13;UBERON:0004786!1.08e-28!13;UBERON:0003350!1.11e-19!9;UBERON:0004808!1.11e-19!9;UBERON:0001277!1.11e-19!9;UBERON:0004923!3.16e-19!24;UBERON:0000160!1.86e-17!43;UBERON:0000485!8.97e-16!11;UBERON:0005409!2.23e-11!59;UBERON:0001007!3.05e-11!128;UBERON:0001555!3.05e-11!128;UBERON:0007026!3.05e-11!128;UBERON:0004119!5.89e-11!130;UBERON:0000925!5.89e-11!130;UBERON:0006595!5.89e-11!130;UBERON:0004921!1.72e-09!126;UBERON:0004185!1.72e-09!126;UBERON:0000331!1.62e-08!3;UBERON:0002116!1.62e-08!3;UBERON:0001204!1.62e-08!3;UBERON:0001168!1.62e-08!3;UBERON:0005178!2.42e-08!17;UBERON:0005181!2.42e-08!17;UBERON:0002224!2.42e-08!17;UBERON:0000915!2.42e-08!17;UBERON:0008947!2.42e-08!17;UBERON:0003258!2.42e-08!17;UBERON:0003126!5.32e-07!3;UBERON:0001005!5.32e-07!3;UBERON:0007196!5.32e-07!3;UBERON:0001558!5.32e-07!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.06e-37,15;UBERON:0001242,1.87e-30,13;UBERON:0001262,1.87e-30,13;UBERON:0004786,1.87e-30,13;UBERON:0000160,3.39e-27,31;UBERON:0004923,8.06e-23,24;UBERON:0005409,4.63e-17,47;UBERON:0003350,4.64e-16,9;UBERON:0004808,4.64e-16,9;UBERON:0001277,4.64e-16,9;UBERON:0000331,9.26e-14,3;UBERON:0002116,9.26e-14,3;UBERON:0001204,9.26e-14,3;UBERON:0001168,9.26e-14,3;UBERON:0000485,4.72e-13,11;UBERON:0002108,1.94e-10,4;UBERON:0001962,5.17e-09,2;UBERON:0001961,5.17e-09,2;UBERON:0001744,5.17e-09,2;UBERON:0001007,2.80e-07,116;UBERON:0001555,2.80e-07,116;UBERON:0007026,2.80e-07,116;UBERON:0004119,4.19e-07,118;UBERON:0000925,4.19e-07,118;UBERON:0006595,4.19e-07,118 | |||
|phase1_expression=0,22.3344260889191,21.8399634906977,3.32710632437513,6.51164448930251,3.3575854382378,9.57811826441655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.23970448894286,7.79991555628378,21.8208146363708,20.6765758156356,19.1769397090441,30.0237002741071,9.32511480111744,52.5501310253072,0,0,0,0.577703239502549,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,2.05530983494308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.15279754584056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,2.31293148088659,11.6358249331959,0,0,0,0,0,0,5.21981967698963,0,0,0,0,6.29173586057955,1.08069024937347,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0.390267295715598,0.157635144106191,0,0.159454768657487,0.327726629431476,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0.412085900803307,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,22.3344260889191,21.8399634906977,3.32710632437513,6.51164448930251,3.3575854382378,9.57811826441655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.23970448894286,7.79991555628378,21.8208146363708,20.6765758156356,19.1769397090441,30.0237002741071,9.32511480111744,52.5501310253072,0,0,0,0.577703239502549,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,2.05530983494308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.15279754584056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,2.31293148088659,11.6358249331959,0,0,0,0,0,0,5.21981967698963,0,0,0,0,6.29173586057955,1.08069024937347,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0.390267295715598,0.157635144106191,0,0.159454768657487,0.327726629431476,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0.412085900803307,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:78417835..78417870,- | |short_description=p@chr6:78417835..78417870,- | ||
}} | }} |
Revision as of 02:02, 14 November 2012
Short description: | p@chr6:78417835..78417870, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:78417835..78417870, - |
Coexpression cluster: | MCL_coexpression_mm9:219 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.62e-24 | 6 |
gut absorptive cell | 2.62e-24 | 6 |
enterocyte | 2.62e-24 | 6 |
columnar/cuboidal epithelial cell | 8.92e-21 | 7 |
intestinal epithelial cell | 4.64e-16 | 9 |
epithelial cell of alimentary canal | 4.64e-16 | 9 |
M cell of gut | 1.50e-13 | 3 |
epithelial cell | 3.12e-12 | 25 |
endo-epithelial cell | 1.95e-09 | 15 |
endodermal cell | 6.07e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.06e-37 | 15 |
intestinal mucosa | 1.87e-30 | 13 |
wall of intestine | 1.87e-30 | 13 |
gastrointestinal system mucosa | 1.87e-30 | 13 |
intestine | 3.39e-27 | 31 |
organ component layer | 8.06e-23 | 24 |
gastrointestinal system | 4.63e-17 | 47 |
epithelium of mucosa | 4.64e-16 | 9 |
gastrointestinal system epithelium | 4.64e-16 | 9 |
intestinal epithelium | 4.64e-16 | 9 |
ileal mucosa | 9.26e-14 | 3 |
ileum | 9.26e-14 | 3 |
mucosa of small intestine | 9.26e-14 | 3 |
wall of small intestine | 9.26e-14 | 3 |
simple columnar epithelium | 4.72e-13 | 11 |
small intestine | 1.94e-10 | 4 |
gut-associated lymphoid tissue | 5.17e-09 | 2 |
mucosa-associated lymphoid tissue | 5.17e-09 | 2 |
lymphoid tissue | 5.17e-09 | 2 |
digestive system | 2.80e-07 | 116 |
digestive tract | 2.80e-07 | 116 |
primitive gut | 2.80e-07 | 116 |
endoderm-derived structure | 4.19e-07 | 118 |
endoderm | 4.19e-07 | 118 |
presumptive endoderm | 4.19e-07 | 118 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.