FFCP PHASE1:Mm9::chr7:52970037..52970048,-: Difference between revisions
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|id=chr7:52970037..52970048,- | |id=chr7:52970037..52970048,- | ||
|ontology_enrichment_celltype=CL:0002563!1.10e-09!9;CL:0002251!1.10e-09!9;CL:0000239!2.37e-07!6;CL:0000677!2.37e-07!6;CL:0000212!2.37e-07!6;CL:0000584!2.37e-07!6 | |ontology_enrichment_celltype=CL:0002563!1.10e-09!9;CL:0002251!1.10e-09!9;CL:0000239!2.37e-07!6;CL:0000677!2.37e-07!6;CL:0000212!2.37e-07!6;CL:0000584!2.37e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.74e-18,9;CL:0002251,2.74e-18,9;CL:0000239,2.41e-16,6;CL:0000677,2.41e-16,6;CL:0000584,2.41e-16,6;CL:0000075,6.50e-14,7;CL:0000066,4.13e-11,25;CL:0002076,1.92e-10,15;CL:0000682,6.85e-09,3;CL:0000223,1.66e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.09e-16!43;UBERON:0005409!3.69e-16!59;UBERON:0000344!9.57e-15!15;UBERON:0001242!6.13e-13!13;UBERON:0000060!6.13e-13!13;UBERON:0001262!6.13e-13!13;UBERON:0004786!6.13e-13!13;UBERON:0003350!1.10e-09!9;UBERON:0004808!1.10e-09!9;UBERON:0001277!1.10e-09!9;UBERON:0001007!6.61e-09!128;UBERON:0001555!6.61e-09!128;UBERON:0007026!6.61e-09!128;UBERON:0004119!1.60e-08!130;UBERON:0000925!1.60e-08!130;UBERON:0006595!1.60e-08!130;UBERON:0004921!6.32e-08!126;UBERON:0004185!6.32e-08!126;UBERON:0000485!2.16e-07!11;UBERON:0004923!3.30e-07!24 | |ontology_enrichment_uberon=UBERON:0000160!1.09e-16!43;UBERON:0005409!3.69e-16!59;UBERON:0000344!9.57e-15!15;UBERON:0001242!6.13e-13!13;UBERON:0000060!6.13e-13!13;UBERON:0001262!6.13e-13!13;UBERON:0004786!6.13e-13!13;UBERON:0003350!1.10e-09!9;UBERON:0004808!1.10e-09!9;UBERON:0001277!1.10e-09!9;UBERON:0001007!6.61e-09!128;UBERON:0001555!6.61e-09!128;UBERON:0007026!6.61e-09!128;UBERON:0004119!1.60e-08!130;UBERON:0000925!1.60e-08!130;UBERON:0006595!1.60e-08!130;UBERON:0004921!6.32e-08!126;UBERON:0004185!6.32e-08!126;UBERON:0000485!2.16e-07!11;UBERON:0004923!3.30e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.11e-27,15;UBERON:0000160,3.99e-27,31;UBERON:0001242,3.73e-23,13;UBERON:0001262,3.73e-23,13;UBERON:0004786,3.73e-23,13;UBERON:0005409,1.33e-20,47;UBERON:0003350,2.74e-18,9;UBERON:0004808,2.74e-18,9;UBERON:0001277,2.74e-18,9;UBERON:0004923,2.99e-16,24;UBERON:0000485,1.01e-14,11;UBERON:0001007,3.87e-09,116;UBERON:0001555,3.87e-09,116;UBERON:0007026,3.87e-09,116;UBERON:0004119,6.82e-09,118;UBERON:0000925,6.82e-09,118;UBERON:0006595,6.82e-09,118;UBERON:0004921,1.67e-07,114 | |||
|phase1_expression=0,4.53668029931169,4.54999239389536,7.56160528267075,9.01612313903425,1.00727563147134,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,1.91990907352088,1.14704640533585,2.29692785646008,1.7230479846363,1.939241094173,1.33016393619462,1.26015064879965,0.443461021310609,0,0,0,1.44425809875637,0.664938581433969,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0.539703191637817,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0.248813941220186,0,22.0963948680798,0,0.229902104433473,0,0,0.136072998302656,0,0.0937017245597288,5.95017752699736,0,0,0,0.219195732427575,0.278047249225598,1.0447564995665,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,6.60837565967596,3.70230793328962,0,0,0.515469845288373,0.403367049246685,1.11189021922435,0.380451252225118,1.89811624617805,0.988193728344065,1.75934646160189,0.596869416123452,0.38992817423824,0.898819408654221,1.51296634912286,1.7922714592893,0,0,0,0,0.193952487167626,0.140271639780637,0.252946148497029,0.147610147979602,0.627994911365499,0.493588655687202,0,0,0,0,0,0,0,0,0.486405680325106,0.274561413188081,1.43768206527355,0,0,0.252578877947112,0.358794827043824,0.964887042726734,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81374878235628,0.807322133479528,0.965006798850494,0.954978752025092,1.64140899745061,3.20628920292836,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0.540026704109006,0.836353184057875,0.218362563746178,0.809186078308924,0.578574190077352,0,1.29614973291793,5.59205381778233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680191150845634,0,0,0.167884616364078,0.579568782096571,1.87682475451182,0,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0.824171801606613,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0,0.182927972872773,0.263069711437843,0,0,0,0.394017929502254,0.818462086339379,0,0.385813221962283,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | |phase1_expression=0,4.53668029931169,4.54999239389536,7.56160528267075,9.01612313903425,1.00727563147134,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,1.91990907352088,1.14704640533585,2.29692785646008,1.7230479846363,1.939241094173,1.33016393619462,1.26015064879965,0.443461021310609,0,0,0,1.44425809875637,0.664938581433969,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0.539703191637817,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0.248813941220186,0,22.0963948680798,0,0.229902104433473,0,0,0.136072998302656,0,0.0937017245597288,5.95017752699736,0,0,0,0.219195732427575,0.278047249225598,1.0447564995665,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,6.60837565967596,3.70230793328962,0,0,0.515469845288373,0.403367049246685,1.11189021922435,0.380451252225118,1.89811624617805,0.988193728344065,1.75934646160189,0.596869416123452,0.38992817423824,0.898819408654221,1.51296634912286,1.7922714592893,0,0,0,0,0.193952487167626,0.140271639780637,0.252946148497029,0.147610147979602,0.627994911365499,0.493588655687202,0,0,0,0,0,0,0,0,0.486405680325106,0.274561413188081,1.43768206527355,0,0,0.252578877947112,0.358794827043824,0.964887042726734,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81374878235628,0.807322133479528,0.965006798850494,0.954978752025092,1.64140899745061,3.20628920292836,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0.540026704109006,0.836353184057875,0.218362563746178,0.809186078308924,0.578574190077352,0,1.29614973291793,5.59205381778233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680191150845634,0,0,0.167884616364078,0.579568782096571,1.87682475451182,0,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0.824171801606613,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0,0.182927972872773,0.263069711437843,0,0,0,0.394017929502254,0.818462086339379,0,0.385813221962283,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p@chr7:52970037..52970048,- | |short_description=p@chr7:52970037..52970048,- | ||
}} | }} |
Revision as of 19:49, 14 November 2012
Short description: | p@chr7:52970037..52970048, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:52970037..52970048, - |
Coexpression cluster: | MCL_coexpression_mm9:493 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.74e-18 | 9 |
epithelial cell of alimentary canal | 2.74e-18 | 9 |
brush border epithelial cell | 2.41e-16 | 6 |
gut absorptive cell | 2.41e-16 | 6 |
enterocyte | 2.41e-16 | 6 |
columnar/cuboidal epithelial cell | 6.50e-14 | 7 |
epithelial cell | 4.13e-11 | 25 |
endo-epithelial cell | 1.92e-10 | 15 |
M cell of gut | 6.85e-09 | 3 |
endodermal cell | 1.66e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.11e-27 | 15 |
intestine | 3.99e-27 | 31 |
intestinal mucosa | 3.73e-23 | 13 |
wall of intestine | 3.73e-23 | 13 |
gastrointestinal system mucosa | 3.73e-23 | 13 |
gastrointestinal system | 1.33e-20 | 47 |
epithelium of mucosa | 2.74e-18 | 9 |
gastrointestinal system epithelium | 2.74e-18 | 9 |
intestinal epithelium | 2.74e-18 | 9 |
organ component layer | 2.99e-16 | 24 |
simple columnar epithelium | 1.01e-14 | 11 |
digestive system | 3.87e-09 | 116 |
digestive tract | 3.87e-09 | 116 |
primitive gut | 3.87e-09 | 116 |
endoderm-derived structure | 6.82e-09 | 118 |
endoderm | 6.82e-09 | 118 |
presumptive endoderm | 6.82e-09 | 118 |
subdivision of digestive tract | 1.67e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.