FFCP PHASE1:Mm9::chr2:60437965..60437970,-: Difference between revisions
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|id=chr2:60437965..60437970,- | |id=chr2:60437965..60437970,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,3.11e-09,3;CL:0002202,3.11e-09,3;CL:0000069,3.11e-09,3;CL:0002632,3.11e-09,3;CL:0002368,3.11e-09,3;CL:0000307,3.11e-09,3;CL:0000377,3.11e-09,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!9.76e-07!17;UBERON:0005181!9.76e-07!17;UBERON:0002224!9.76e-07!17;UBERON:0000915!9.76e-07!17;UBERON:0008947!9.76e-07!17;UBERON:0003258!9.76e-07!17 | |ontology_enrichment_uberon=UBERON:0005178!9.76e-07!17;UBERON:0005181!9.76e-07!17;UBERON:0002224!9.76e-07!17;UBERON:0000915!9.76e-07!17;UBERON:0008947!9.76e-07!17;UBERON:0003258!9.76e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,2.51e-11,17;UBERON:0005181,2.51e-11,17;UBERON:0002224,2.51e-11,17;UBERON:0000915,2.51e-11,17;UBERON:0008947,2.51e-11,17;UBERON:0003258,2.51e-11,17;UBERON:0003126,3.11e-09,3;UBERON:0001005,3.11e-09,3;UBERON:0007196,3.11e-09,3;UBERON:0001558,3.11e-09,3;UBERON:0001007,8.50e-09,116;UBERON:0001555,8.50e-09,116;UBERON:0007026,8.50e-09,116;UBERON:0004119,1.48e-08,118;UBERON:0000925,1.48e-08,118;UBERON:0006595,1.48e-08,118;UBERON:0004921,5.01e-08,114 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0.799962113967033,3.21172993494038,0.57423196411502,1.7230479846363,0.215471232685889,1.71021077510736,0.756090389279792,1.55211357458713,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,1.12674735821344,0,0,0,2.59789249213457,3.54703811665138,2.02209778005913,0.68510327831436,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0.323533699894818,0,0.484875253135222,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0,0,0,0.776110112217047,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.32833492815819,0.243206428637567,0.877199924551994,1.3173006917463,0.268412837520744,0,0,0.660837565967596,0,0.213288250535234,0,0,0.403367049246685,0.22237804384487,0,0.949058123089023,1.4822905925161,2.01068167040216,2.78539060857611,1.75467678407208,0,1.08069024937347,0.597423819763102,0,0.456994050438915,0,0.814605311381257,1.16371492300575,0.561086559122548,1.51767689098217,4.57591458736767,9.10592621479974,3.70191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.739012760666419,0,0.162964976442026,0,0.234690248288502,0,0.952174563544055,0,1.10344600874334,1.32878813789265,1.59454768657487,1.96635977658886,1.72684981865896,2.89298117163023,0,0,0,0.275936746304732,0,0,0,1.26235463602186,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.494910368917606,0,0.242780636154981,0,0.188605079755898,0,0,0.516856586336442,0.727067458955011,0.712994756769443,0.316036757935816,0,0,0,0.18006109403131,0.388076051348264,0,0,0,0.164549020602121,0.304464949114599,0,0.42366414172764,0,0.98931751764888,0.161464426695906,0.120625849856312,0.358117032009409,0.328281799490123,0.582961673259701,0,0,0,0,0,0,0,0,0,0,4.77335309007557,0,0,0.216010681643603,0,1.31017538247707,0.674321731924103,1.07449492442937,2.09404753587224,1.29614973291793,1.24267862617385,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,1.13365191807606,0,0,0,0.772758376128762,0.187682475451182,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.37456602987953,0.128050304809739,0.17230640686684,0,0.579421629724277,0.192909220463705,0,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0.470546902076653,0.592302255241736,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0,0.197008964751127,0.409231043169689,0,0,0,0.233931608445408,0,0.191288332068843,0,0.231867835620421 | |phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0.799962113967033,3.21172993494038,0.57423196411502,1.7230479846363,0.215471232685889,1.71021077510736,0.756090389279792,1.55211357458713,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,1.12674735821344,0,0,0,2.59789249213457,3.54703811665138,2.02209778005913,0.68510327831436,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0.323533699894818,0,0.484875253135222,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0,0,0,0.776110112217047,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.32833492815819,0.243206428637567,0.877199924551994,1.3173006917463,0.268412837520744,0,0,0.660837565967596,0,0.213288250535234,0,0,0.403367049246685,0.22237804384487,0,0.949058123089023,1.4822905925161,2.01068167040216,2.78539060857611,1.75467678407208,0,1.08069024937347,0.597423819763102,0,0.456994050438915,0,0.814605311381257,1.16371492300575,0.561086559122548,1.51767689098217,4.57591458736767,9.10592621479974,3.70191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.739012760666419,0,0.162964976442026,0,0.234690248288502,0,0.952174563544055,0,1.10344600874334,1.32878813789265,1.59454768657487,1.96635977658886,1.72684981865896,2.89298117163023,0,0,0,0.275936746304732,0,0,0,1.26235463602186,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.494910368917606,0,0.242780636154981,0,0.188605079755898,0,0,0.516856586336442,0.727067458955011,0.712994756769443,0.316036757935816,0,0,0,0.18006109403131,0.388076051348264,0,0,0,0.164549020602121,0.304464949114599,0,0.42366414172764,0,0.98931751764888,0.161464426695906,0.120625849856312,0.358117032009409,0.328281799490123,0.582961673259701,0,0,0,0,0,0,0,0,0,0,4.77335309007557,0,0,0.216010681643603,0,1.31017538247707,0.674321731924103,1.07449492442937,2.09404753587224,1.29614973291793,1.24267862617385,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,1.13365191807606,0,0,0,0.772758376128762,0.187682475451182,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.37456602987953,0.128050304809739,0.17230640686684,0,0.579421629724277,0.192909220463705,0,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0.470546902076653,0.592302255241736,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0,0.197008964751127,0.409231043169689,0,0,0,0.233931608445408,0,0.191288332068843,0,0.231867835620421 | ||
|short_description=p@chr2:60437965..60437970,- | |short_description=p@chr2:60437965..60437970,- | ||
}} | }} |
Revision as of 00:40, 15 November 2012
Short description: | p@chr2:60437965..60437970, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:60437965..60437970, - |
Coexpression cluster: | MCL_coexpression_mm9:352 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 3.11e-09 | 3 |
epithelial cell of tracheobronchial tree | 3.11e-09 | 3 |
branched duct epithelial cell | 3.11e-09 | 3 |
epithelial cell of lower respiratory tract | 3.11e-09 | 3 |
respiratory epithelial cell | 3.11e-09 | 3 |
tracheal epithelial cell | 3.11e-09 | 3 |
tracheoblast | 3.11e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 2.51e-11 | 17 |
thoracic segment organ | 2.51e-11 | 17 |
thoracic cavity | 2.51e-11 | 17 |
thoracic segment of trunk | 2.51e-11 | 17 |
respiratory primordium | 2.51e-11 | 17 |
endoderm of foregut | 2.51e-11 | 17 |
trachea | 3.11e-09 | 3 |
respiratory airway | 3.11e-09 | 3 |
tracheobronchial tree | 3.11e-09 | 3 |
lower respiratory tract | 3.11e-09 | 3 |
digestive system | 8.50e-09 | 116 |
digestive tract | 8.50e-09 | 116 |
primitive gut | 8.50e-09 | 116 |
endoderm-derived structure | 1.48e-08 | 118 |
endoderm | 1.48e-08 | 118 |
presumptive endoderm | 1.48e-08 | 118 |
subdivision of digestive tract | 5.01e-08 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.