FFCP PHASE1:Hg19::chr1:44398943..44398960,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!1.86e-19!254;CL:0002076!2.54e-14!43;CL:0002368!5.44e-11!13;CL:0000223!1.43e-10!59;CL:0002321!1.95e-09!248;CL:0000220!1.36e-08!246;CL:0002322!3.79e-07!5;CL:0002202!5.46e-07!9;CL:0002632!5.46e-07!9 | |ontology_enrichment_celltype=CL:0000066!1.86e-19!254;CL:0002076!2.54e-14!43;CL:0002368!5.44e-11!13;CL:0000223!1.43e-10!59;CL:0002321!1.95e-09!248;CL:0000220!1.36e-08!246;CL:0002322!3.79e-07!5;CL:0002202!5.46e-07!9;CL:0002632!5.46e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002327;9.42e-13;4!CL:0000575;3.33e-12;2!CL:0000317;8.52e-12;2!CL:1000448;8.52e-12;2!CL:0002308;8.52e-12;2!CL:0002140;8.52e-12;2!CL:0002076;9.02e-11;42!CL:0002368;2.33e-10;13!CL:0000307;2.03e-08;3!CL:0000039;1.06e-07;7!CL:0000586;1.06e-07;7!CL:1001319;3.82e-07;1!CL:1000600;3.82e-07;1!CL:0002251;9.52e-07;20 | |ontology_enrichment_celltype_v019=CL:0002327;9.42e-13;4!CL:0000575;3.33e-12;2!CL:0000317;8.52e-12;2!CL:1000448;8.52e-12;2!CL:0002308;8.52e-12;2!CL:0002140;8.52e-12;2!CL:0002076;9.02e-11;42!CL:0002368;2.33e-10;13!CL:0000307;2.03e-08;3!CL:0000039;1.06e-07;7!CL:0000586;1.06e-07;7!CL:1001319;3.82e-07;1!CL:1000600;3.82e-07;1!CL:0002251;9.52e-07;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.07e-16,253;CL:0002076,1.20e-13,42;CL:0002327,8.24e-13,4;CL:0000575,2.53e-12,2;CL:0000317,6.52e-12,2;CL:1000448,6.52e-12,2;CL:0002308,6.52e-12,2;CL:0002140,6.52e-12,2;CL:0002368,1.97e-10,13;CL:0000223,2.60e-09,58;CL:0000076,1.58e-08,63;CL:0000068,2.04e-08,3;CL:0000069,2.04e-08,3;CL:0000307,2.04e-08,3;CL:0000377,2.04e-08,3;CL:0000039,7.93e-08,7;CL:0000586,7.93e-08,7;CL:1001319,4.18e-07,1;CL:1000600,4.18e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000377;2.03e-08;3!CL:0000223;4.61e-07;58 | |ontology_enrichment_development_v019=CL:0000377;2.03e-08;3!CL:0000223;4.61e-07;58 | ||
|ontology_enrichment_disease=DOID:0050687!1.64e-14!143;DOID:305!2.42e-14!106;DOID:162!6.86e-13!235;DOID:14566!1.17e-12!239;DOID:1749!2.74e-12!14;DOID:3095!9.87e-08!22;DOID:2994!9.87e-08!22 | |ontology_enrichment_disease=DOID:0050687!1.64e-14!143;DOID:305!2.42e-14!106;DOID:162!6.86e-13!235;DOID:14566!1.17e-12!239;DOID:1749!2.74e-12!14;DOID:3095!9.87e-08!22;DOID:2994!9.87e-08!22 | ||
|ontology_enrichment_disease_v019=DOID:1749;6.33e-14;14 | |ontology_enrichment_disease_v019=DOID:1749;6.33e-14;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,5.96e-14,14 | |||
|ontology_enrichment_uberon=UBERON:0003729!1.23e-07!5;UBERON:0005153!7.92e-07!37 | |ontology_enrichment_uberon=UBERON:0003729!1.23e-07!5;UBERON:0005153!7.92e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0001911;9.42e-13;4!UBERON:0002419;8.52e-12;2!UBERON:0007771;8.52e-12;2!UBERON:0003297;8.52e-12;2!UBERON:0001821;8.52e-12;2!UBERON:0003487;8.52e-12;2!UBERON:0001820;8.52e-12;2!UBERON:0004645;3.82e-07;1!UBERON:0001256;3.82e-07;1!UBERON:0001259;3.82e-07;1!UBERON:0003729;4.68e-07;13!UBERON:0000344;7.68e-07;20!UBERON:0000473;8.70e-07;8!UBERON:0003343;9.63e-07;4!UBERON:0004785;9.63e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001911;9.42e-13;4!UBERON:0002419;8.52e-12;2!UBERON:0007771;8.52e-12;2!UBERON:0003297;8.52e-12;2!UBERON:0001821;8.52e-12;2!UBERON:0003487;8.52e-12;2!UBERON:0001820;8.52e-12;2!UBERON:0004645;3.82e-07;1!UBERON:0001256;3.82e-07;1!UBERON:0001259;3.82e-07;1!UBERON:0003729;4.68e-07;13!UBERON:0000344;7.68e-07;20!UBERON:0000473;8.70e-07;8!UBERON:0003343;9.63e-07;4!UBERON:0004785;9.63e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,8.24e-13,4;UBERON:0005333,8.24e-13,4;UBERON:0008425,8.24e-13,4;UBERON:0005311,8.24e-13,4;UBERON:0002419,6.52e-12,2;UBERON:0007771,6.52e-12,2;UBERON:0003297,6.52e-12,2;UBERON:0001821,6.52e-12,2;UBERON:0003487,6.52e-12,2;UBERON:0001820,6.52e-12,2;UBERON:0005089,6.52e-12,2;UBERON:0005088,6.52e-12,2;UBERON:0000076,5.61e-11,8;UBERON:0005085,4.41e-10,31;UBERON:0004645,4.18e-07,1;UBERON:0001256,4.18e-07,1;UBERON:0001259,4.18e-07,1;UBERON:0003729,5.38e-07,13;UBERON:0000473,6.74e-07,8;UBERON:0000344,8.75e-07,20;UBERON:0003343,9.27e-07,4;UBERON:0004785,9.27e-07,4 | |||
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| ||
|short_description=p7@ARTN | |short_description=p7@ARTN | ||
}} | }} |
Revision as of 18:42, 17 November 2012
Short description: | p7@ARTN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_ARTN_5end |
Coexpression cluster: | NA |
Association with transcript: | -31bp_to_ENST00000372359, ENST00000414809, NM_001136215, NM_057090, NM_057091, uc001cks.2, uc001ckt.2, uc001ckv.2_5end |
EntrezGene: | ARTN |
HGNC: | 727 |
UniProt: | Q5T4W7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.07e-16 | 253 |
endo-epithelial cell | 1.20e-13 | 42 |
mammary gland epithelial cell | 8.24e-13 | 4 |
corneal epithelial cell | 2.53e-12 | 2 |
sebum secreting cell | 6.52e-12 | 2 |
epithelial cell of sweat gland | 6.52e-12 | 2 |
epithelial cell of skin gland | 6.52e-12 | 2 |
acinar cell of sebaceous gland | 6.52e-12 | 2 |
respiratory epithelial cell | 1.97e-10 | 13 |
endodermal cell | 2.60e-09 | 58 |
squamous epithelial cell | 1.58e-08 | 63 |
duct epithelial cell | 2.04e-08 | 3 |
branched duct epithelial cell | 2.04e-08 | 3 |
tracheal epithelial cell | 2.04e-08 | 3 |
tracheoblast | 2.04e-08 | 3 |
germ line cell | 7.93e-08 | 7 |
germ cell | 7.93e-08 | 7 |
bladder cell | 4.18e-07 | 1 |
lower urinary tract cell | 4.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 8.24e-13 | 4 |
mammary bud | 8.24e-13 | 4 |
mammary ridge | 8.24e-13 | 4 |
mammary placode | 8.24e-13 | 4 |
skin gland | 6.52e-12 | 2 |
epidermis gland | 6.52e-12 | 2 |
gland of integumental system | 6.52e-12 | 2 |
sebaceous gland | 6.52e-12 | 2 |
skin sebaceous gland | 6.52e-12 | 2 |
sweat gland | 6.52e-12 | 2 |
sweat gland placode | 6.52e-12 | 2 |
sebaceous gland placode | 6.52e-12 | 2 |
external ectoderm | 5.61e-11 | 8 |
ectodermal placode | 4.41e-10 | 31 |
urinary bladder urothelium | 4.18e-07 | 1 |
wall of urinary bladder | 4.18e-07 | 1 |
mucosa of urinary bladder | 4.18e-07 | 1 |
mouth mucosa | 5.38e-07 | 13 |
testis | 6.74e-07 | 8 |
mucosa | 8.75e-07 | 20 |
mucosa of oral region | 9.27e-07 | 4 |
respiratory system mucosa | 9.27e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.96e-14 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.