FFCP PHASE1:Hg19::chr6:293816..293821,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000738!2.61e-30!140;CL:0002031!8.27e-25!124;CL:0000037!2.55e-23!172;CL:0000566!2.55e-23!172;CL:0000988!3.51e-23!182;CL:0002087!4.14e-23!119;CL:0002032!1.53e-22!165;CL:0000837!1.53e-22!165;CL:0000542!2.63e-13!53;CL:0000051!2.63e-13!53;CL:0000766!5.99e-13!76;CL:0000838!7.78e-13!52;CL:0000557!1.21e-12!71;CL:0000860!4.94e-12!45;CL:0002009!1.21e-11!65;CL:0002057!1.74e-11!42;CL:0000839!4.16e-11!70;CL:0002194!1.90e-10!63;CL:0000576!1.90e-10!63;CL:0000040!1.90e-10!63;CL:0000559!1.90e-10!63;CL:0000763!2.56e-10!112;CL:0000049!2.56e-10!112;CL:0000451!1.50e-08!10;CL:0000945!6.10e-08!24;CL:0000826!6.10e-08!24 | |ontology_enrichment_celltype=CL:0000738!2.61e-30!140;CL:0002031!8.27e-25!124;CL:0000037!2.55e-23!172;CL:0000566!2.55e-23!172;CL:0000988!3.51e-23!182;CL:0002087!4.14e-23!119;CL:0002032!1.53e-22!165;CL:0000837!1.53e-22!165;CL:0000542!2.63e-13!53;CL:0000051!2.63e-13!53;CL:0000766!5.99e-13!76;CL:0000838!7.78e-13!52;CL:0000557!1.21e-12!71;CL:0000860!4.94e-12!45;CL:0002009!1.21e-11!65;CL:0002057!1.74e-11!42;CL:0000839!4.16e-11!70;CL:0002194!1.90e-10!63;CL:0000576!1.90e-10!63;CL:0000040!1.90e-10!63;CL:0000559!1.90e-10!63;CL:0000763!2.56e-10!112;CL:0000049!2.56e-10!112;CL:0000451!1.50e-08!10;CL:0000945!6.10e-08!24;CL:0000826!6.10e-08!24 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.99e-23;24!CL:0002591;7.23e-13;1!CL:0000840;5.67e-09;5!CL:0001014;2.15e-07;2!CL:0001016;2.15e-07;2 | |ontology_enrichment_celltype_v019=CL:0000945;1.99e-23;24!CL:0002591;7.23e-13;1!CL:0000840;5.67e-09;5!CL:0001014;2.15e-07;2!CL:0001016;2.15e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.10e-23,24;CL:0000826,2.10e-23,24;CL:0002591,1.09e-12,1;CL:0000838,1.71e-10,52;CL:0002031,2.47e-10,120;CL:0000542,2.77e-10,53;CL:0000051,2.77e-10,53;CL:0000840,5.35e-09,5;CL:0001029,5.35e-09,5;CL:0000738,5.95e-09,136;CL:0002087,7.44e-09,115;CL:0000988,6.91e-08,177;CL:0001014,2.15e-07,2;CL:0001016,2.15e-07,2;CL:0002032,2.46e-07,161;CL:0000837,2.46e-07,161;CL:0000037,5.75e-07,168 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.78e-13;1!UBERON:0005425;2.78e-13;1 | |ontology_enrichment_development_v019=UBERON:0000358;2.78e-13;1!UBERON:0005425;2.78e-13;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4960;2.78e-13;1!DOID:0070004;2.78e-13;1 | |ontology_enrichment_disease_v019=DOID:4960;2.78e-13;1!DOID:0070004;2.78e-13;1 | ||
|ontology_enrichment_disease_v019_2=DOID:4960,3.76e-13,1;DOID:0070004,3.76e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.72e-13!102;UBERON:0003061!4.72e-13!102;UBERON:0002193!8.24e-12!112;UBERON:0002371!9.20e-11!80;UBERON:0002405!1.10e-10!115;UBERON:0001474!9.03e-10!86;UBERON:0004765!1.55e-07!101;UBERON:0001434!1.55e-07!101 | |ontology_enrichment_uberon=UBERON:0002390!4.72e-13!102;UBERON:0003061!4.72e-13!102;UBERON:0002193!8.24e-12!112;UBERON:0002371!9.20e-11!80;UBERON:0002405!1.10e-10!115;UBERON:0001474!9.03e-10!86;UBERON:0004765!1.55e-07!101;UBERON:0001434!1.55e-07!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.78e-13;1!UBERON:0001785;2.78e-13;1!UBERON:0002464;2.78e-13;1!UBERON:0004904;2.78e-13;1!UBERON:0001021;2.78e-13;1!UBERON:0003714;2.82e-07;2!UBERON:0005162;2.82e-07;2!UBERON:0000122;2.82e-07;2!UBERON:0000078;4.55e-07;2!UBERON:0002012;4.55e-07;2!UBERON:0008886;4.55e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0000941;2.78e-13;1!UBERON:0001785;2.78e-13;1!UBERON:0002464;2.78e-13;1!UBERON:0004904;2.78e-13;1!UBERON:0001021;2.78e-13;1!UBERON:0003714;2.82e-07;2!UBERON:0005162;2.82e-07;2!UBERON:0000122;2.82e-07;2!UBERON:0000078;4.55e-07;2!UBERON:0002012;4.55e-07;2!UBERON:0008886;4.55e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.82e-13,1;UBERON:0001785,1.82e-13,1;UBERON:0002464,1.82e-13,1;UBERON:0004904,1.82e-13,1;UBERON:0001021,1.82e-13,1;UBERON:0003902,1.82e-13,1;UBERON:0005425,1.82e-13,1;UBERON:0003714,2.28e-07,2;UBERON:0005162,2.28e-07,2;UBERON:0000122,2.28e-07,2;UBERON:0000078,5.60e-07,2;UBERON:0007497,5.60e-07,2;UBERON:0003643,5.60e-07,2;UBERON:0003504,5.60e-07,2;UBERON:0003469,5.60e-07,2;UBERON:0003496,5.60e-07,2;UBERON:0002012,5.60e-07,2;UBERON:0008886,5.60e-07,2;UBERON:0007303,5.60e-07,2;UBERON:0002061,5.60e-07,2;UBERON:0005432,5.60e-07,2;UBERON:0004363,5.60e-07,2 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,2.44522898393444,2.05251473624864,2.12519109546934,0,0.383829398097213,0.619264493264304,0,0,0,0.232401601740905,1.27952309238679,0,1.66198622559563,0.802177789880567,0.651032612147555,0,0.32389366601898,0,0.436194716338694,0.377875943688809,0.485168122375632,0.697287110717054,0,0,0,0.256160706529101,0.236482229888585,0,0.645484683583826,0,0.941211697713023,0.272906150057846,0.224723484445085,0,0,0,0.659702600373432,0,0.852449501065388,0.870627715885752,0,0,0.502497330513487,0,0.434377689410233,1.21079900526674,0,0.316462387440884,0,0,0.209658645508376,0.673971786878971,0.450530678524519,0.16072558669708,0.570025487482497,0.39783335439818,0,0,0.546138611262131,0,0,0.400395987036012,0,1.32208974556972,0,2.27685187643779,0,0,0,0,0,0.196709770113833,0,0,0,0.32592226663359,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0.328875809207352,0,0,0.14828656316206,0,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0,0.604820229674197,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.0654895377488563,0,0,0.649094787309367,0.174129737299267,0,2.38490624305342,0.571994910780128,0.74291500265913,0.198762407366705,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0.207328115540772,0.288239906833923,0.12624243342638,0.190493682876507,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0.394061520403854,0.862510299438069,0.898401253958239,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,0,0,0,0.185803175125719,0,0.0711418433484141,0,0.199579371432817,0.191505370132367,0.211673582723883,0,0,0,0.156679895773023,0,0,0,0.403599414382095,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.293016358543788,0.121360521749513,0,0,0.23874448473769,0,0,0,0.422008249231538,0,0.329607748453519,0,0,0.276283915531148,0,0,0.738508832766417,0,0,0.179021174675609,0,0.0986434056369336,0,0,0.969332746095218,0.0927680981618513,0,0.260427761085233,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0.331737779793674,0.295547618953547,0.219385397153973,0,0,0.0769502585037971,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,1.18608451472249,0.247127877893006,0.835375596043643,0.337005664903385,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.189559738885464,0.300646838828985,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0.195984794828755,0.174118413160805,0,0,0.19351266257817,0.219267951258557,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0.114536596165916,0,0.14405479798815,0,0,0,0,0,0,0,0.273810757783986,0,0,0.262887354279314,0.279282401272254,0.229160424011684,0,0,0,0,0.201550417460179,0,0,0.236349546921671,0.164831716762333,0.13480708770837,0,0.169346664131569,0,0.272406812223151,0.321506296930038,0,0,0.2249738915515,4.6428117273477,0.242998226632099,0,0.0788057072991982,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0.26446520348538,0.171086837884329,0,0,0,0,0,0.592834895693833,0.730755590285376,0,0,0.7520696820681,0.612691153526923,0,0,0,0,0,0.573409195690071,0.110929051536852,0.124192805882767,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0.194860308839388,0.132864840313363,0.654261577023377,0,0,0,0.59996218756479,0.213383459388282,2.06657975592979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0.161475645631851,2.85538840518309,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.202612753855184,0,0.620060389503552,0.380494861163441,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0.428859265059938,0.158013611732727,0,0.173858272302579,0,0.207216164163037,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0.594092800654172,0,0,0,0.0644578879735772,0.999411559249289,0,0,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| ||
|short_description=p@chr6:293816..293821,+ | |short_description=p@chr6:293816..293821,+ | ||
}} | }} |
Revision as of 00:06, 18 November 2012
Short description: | p@chr6:293816..293821, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:293816..293821, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.10e-23 | 24 |
pro-B cell | 2.10e-23 | 24 |
smooth muscle cell of the pulmonary artery | 1.09e-12 | 1 |
lymphoid lineage restricted progenitor cell | 1.71e-10 | 52 |
hematopoietic lineage restricted progenitor cell | 2.47e-10 | 120 |
lymphocyte | 2.77e-10 | 53 |
common lymphoid progenitor | 2.77e-10 | 53 |
immature conventional dendritic cell | 5.35e-09 | 5 |
common dendritic progenitor | 5.35e-09 | 5 |
leukocyte | 5.95e-09 | 136 |
nongranular leukocyte | 7.44e-09 | 115 |
hematopoietic cell | 6.91e-08 | 177 |
CD1a-positive Langerhans cell | 2.15e-07 | 2 |
immature CD1a-positive Langerhans cell | 2.15e-07 | 2 |
hematopoietic oligopotent progenitor cell | 2.46e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.46e-07 | 161 |
hematopoietic stem cell | 5.75e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.82e-13 | 1 |
cranial nerve | 1.82e-13 | 1 |
nerve trunk | 1.82e-13 | 1 |
nerve connecting eye with brain | 1.82e-13 | 1 |
nerve | 1.82e-13 | 1 |
retinal neural layer | 1.82e-13 | 1 |
presumptive neural retina | 1.82e-13 | 1 |
neural tissue | 2.28e-07 | 2 |
multi cell component structure | 2.28e-07 | 2 |
neuron projection bundle | 2.28e-07 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 5.60e-07 | 2 |
developing epithelial placode | 5.60e-07 | 2 |
respiratory system arterial blood vessel | 5.60e-07 | 2 |
respiratory system blood vessel | 5.60e-07 | 2 |
respiratory system artery | 5.60e-07 | 2 |
head blood vessel | 5.60e-07 | 2 |
pulmonary artery | 5.60e-07 | 2 |
pulmonary vascular system | 5.60e-07 | 2 |
pharyngeal vasculature | 5.60e-07 | 2 |
truncus arteriosus | 5.60e-07 | 2 |
aortic sac | 5.60e-07 | 2 |
pharyngeal arch artery | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 3.76e-13 | 1 |
myeloma | 3.76e-13 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.