FFCP PHASE1:Hg19::chr17:39928501..39928513,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!4.10e-24!254;CL:0002076!8.76e-24!43;CL:0000223!5.53e-18!59;CL:0002251!9.10e-13!21;CL:0002368!2.63e-09!13;CL:0002202!3.60e-09!9;CL:0002632!3.60e-09!9;CL:0002159!4.04e-08!13;CL:0000349!4.69e-07!3;CL:0002577!4.69e-07!3;CL:0000076!6.49e-07!62 | |ontology_enrichment_celltype=CL:0000066!4.10e-24!254;CL:0002076!8.76e-24!43;CL:0000223!5.53e-18!59;CL:0002251!9.10e-13!21;CL:0002368!2.63e-09!13;CL:0002202!3.60e-09!9;CL:0002632!3.60e-09!9;CL:0002159!4.04e-08!13;CL:0000349!4.69e-07!3;CL:0002577!4.69e-07!3;CL:0000076!6.49e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0002577;2.72e-18;3!CL:0000349;5.18e-14;19!CL:0000575;1.52e-12;2!CL:0002537;7.27e-11;5!CL:0002252;2.67e-07;1!CL:0002159;7.45e-07;14 | |ontology_enrichment_celltype_v019=CL:0002577;2.72e-18;3!CL:0000349;5.18e-14;19!CL:0000575;1.52e-12;2!CL:0002537;7.27e-11;5!CL:0002252;2.67e-07;1!CL:0002159;7.45e-07;14 | ||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.56e-18,3;CL:0000349,4.94e-14,19;CL:0000575,7.54e-13,2;CL:0002537,7.29e-11,5;CL:0002252,3.20e-07,1;CL:0000066,3.58e-07,253;CL:0002159,6.09e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.67e-07;1!UBERON:0008425;6.48e-07;1 | |ontology_enrichment_development_v019=UBERON:0009143;2.67e-07;1!UBERON:0008425;6.48e-07;1 | ||
|ontology_enrichment_disease=DOID:1749!2.83e-15!14;DOID:305!9.08e-13!106;DOID:299!4.05e-09!25;DOID:5093!2.21e-08!4;DOID:1612!2.21e-08!4;DOID:0050687!3.56e-08!143 | |ontology_enrichment_disease=DOID:1749!2.83e-15!14;DOID:305!9.08e-13!106;DOID:299!4.05e-09!25;DOID:5093!2.21e-08!4;DOID:1612!2.21e-08!4;DOID:0050687!3.56e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:5093;1.88e-13;4!DOID:1612;1.88e-13;4!DOID:3151;2.67e-07;1!DOID:3149;2.67e-07;1 | |ontology_enrichment_disease_v019=DOID:5093;1.88e-13;4!DOID:1612;1.88e-13;4!DOID:3151;2.67e-07;1!DOID:3149;2.67e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,1.73e-13,4;DOID:1612,1.73e-13,4;DOID:3151,2.52e-07,1;DOID:3149,2.52e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.85e-18!169;UBERON:0000925!4.85e-18!169;UBERON:0006595!4.85e-18!169;UBERON:0001007!1.21e-12!155;UBERON:0001555!1.21e-12!155;UBERON:0007026!1.21e-12!155;UBERON:0000077!1.44e-12!130;UBERON:0005911!4.60e-12!82;UBERON:0000344!6.04e-10!12;UBERON:0005631!1.35e-09!14;UBERON:0000158!1.35e-09!14;UBERON:0004921!2.37e-09!129;UBERON:0004185!2.37e-09!129;UBERON:0001004!6.89e-09!72;UBERON:0002294!3.39e-08!7;UBERON:0001173!3.39e-08!7;UBERON:0004912!3.39e-08!7;UBERON:0003729!3.49e-08!5;UBERON:0001987!3.62e-08!4;UBERON:0004340!3.62e-08!4;UBERON:0005153!4.52e-08!37;UBERON:0000065!1.20e-07!53;UBERON:0000072!1.29e-07!46;UBERON:0000161!2.01e-07!35;UBERON:0004807!2.43e-07!28;UBERON:0000974!4.22e-07!10;UBERON:0005178!4.85e-07!34;UBERON:0002224!4.85e-07!34;UBERON:0001041!5.15e-07!98;UBERON:0003343!5.32e-07!4;UBERON:0004785!5.32e-07!4;UBERON:0007196!5.74e-07!14;UBERON:0001558!5.74e-07!14;UBERON:0000915!9.24e-07!52;UBERON:0005181!9.61e-07!35 | |ontology_enrichment_uberon=UBERON:0004119!4.85e-18!169;UBERON:0000925!4.85e-18!169;UBERON:0006595!4.85e-18!169;UBERON:0001007!1.21e-12!155;UBERON:0001555!1.21e-12!155;UBERON:0007026!1.21e-12!155;UBERON:0000077!1.44e-12!130;UBERON:0005911!4.60e-12!82;UBERON:0000344!6.04e-10!12;UBERON:0005631!1.35e-09!14;UBERON:0000158!1.35e-09!14;UBERON:0004921!2.37e-09!129;UBERON:0004185!2.37e-09!129;UBERON:0001004!6.89e-09!72;UBERON:0002294!3.39e-08!7;UBERON:0001173!3.39e-08!7;UBERON:0004912!3.39e-08!7;UBERON:0003729!3.49e-08!5;UBERON:0001987!3.62e-08!4;UBERON:0004340!3.62e-08!4;UBERON:0005153!4.52e-08!37;UBERON:0000065!1.20e-07!53;UBERON:0000072!1.29e-07!46;UBERON:0000161!2.01e-07!35;UBERON:0004807!2.43e-07!28;UBERON:0000974!4.22e-07!10;UBERON:0005178!4.85e-07!34;UBERON:0002224!4.85e-07!34;UBERON:0001041!5.15e-07!98;UBERON:0003343!5.32e-07!4;UBERON:0004785!5.32e-07!4;UBERON:0007196!5.74e-07!14;UBERON:0001558!5.74e-07!14;UBERON:0000915!9.24e-07!52;UBERON:0005181!9.61e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;7.42e-14;4!UBERON:0000305;3.37e-13;7!UBERON:0000478;6.54e-11;24!UBERON:0005631;2.80e-09;10!UBERON:0000158;2.80e-09;10!UBERON:0001043;6.65e-09;3!UBERON:0001723;9.25e-09;3!UBERON:0001033;9.25e-09;3!UBERON:0002372;6.48e-07;1!UBERON:0005795;6.48e-07;1!UBERON:0000997;6.48e-07;1!UBERON:0005056;6.48e-07;1!UBERON:0001961;6.48e-07;1!UBERON:0001744;6.48e-07;1!UBERON:0004176;6.48e-07;1!UBERON:0001042;6.48e-07;1!UBERON:0001735;6.48e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0001987;7.42e-14;4!UBERON:0000305;3.37e-13;7!UBERON:0000478;6.54e-11;24!UBERON:0005631;2.80e-09;10!UBERON:0000158;2.80e-09;10!UBERON:0001043;6.65e-09;3!UBERON:0001723;9.25e-09;3!UBERON:0001033;9.25e-09;3!UBERON:0002372;6.48e-07;1!UBERON:0005795;6.48e-07;1!UBERON:0000997;6.48e-07;1!UBERON:0005056;6.48e-07;1!UBERON:0001961;6.48e-07;1!UBERON:0001744;6.48e-07;1!UBERON:0004176;6.48e-07;1!UBERON:0001042;6.48e-07;1!UBERON:0001735;6.48e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.38e-19,14;UBERON:0000158,2.38e-19,14;UBERON:0001987,4.91e-14,4;UBERON:0004340,4.91e-14,4;UBERON:0000305,4.23e-13,7;UBERON:0004871,1.75e-11,8;UBERON:0000478,6.30e-11,24;UBERON:0001043,6.16e-09,3;UBERON:0009143,6.16e-09,3;UBERON:0001723,9.09e-09,3;UBERON:0001033,9.09e-09,3;UBERON:0010056,9.09e-09,3;UBERON:0003124,3.23e-08,7;UBERON:0000997,5.78e-07,1;UBERON:0005056,5.78e-07,1;UBERON:0004923,6.92e-07,66;UBERON:0000964,7.75e-07,4;UBERON:0010409,7.75e-07,4;UBERON:0004348,7.75e-07,4;UBERON:0005427,7.75e-07,4 | |||
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| ||
|short_description=p10@JUP | |short_description=p10@JUP | ||
}} | }} |
Revision as of 07:08, 18 November 2012
Short description: | p10@JUP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_JUP_5end |
Coexpression cluster: | C133_signet_gall_small_kidney_colon_ductal_adenocarcinoma |
Association with transcript: | 7bp_to_ENST00000420370_5end |
EntrezGene: | JUP |
HGNC: | 6207 |
UniProt: | C9J826 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.56e-18 | 3 |
extraembryonic cell | 4.94e-14 | 19 |
corneal epithelial cell | 7.54e-13 | 2 |
amnion mesenchymal stem cell | 7.29e-11 | 5 |
epithelial cell of esophagus | 3.20e-07 | 1 |
epithelial cell | 3.58e-07 | 253 |
general ecto-epithelial cell | 6.09e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.38e-19 | 14 |
membranous layer | 2.38e-19 | 14 |
placenta | 4.91e-14 | 4 |
allantois | 4.91e-14 | 4 |
amnion | 4.23e-13 | 7 |
somatic layer of lateral plate mesoderm | 1.75e-11 | 8 |
extraembryonic structure | 6.30e-11 | 24 |
esophagus | 6.16e-09 | 3 |
esophageal region | 6.16e-09 | 3 |
tongue | 9.09e-09 | 3 |
gustatory system | 9.09e-09 | 3 |
future tongue | 9.09e-09 | 3 |
chorion | 3.23e-08 | 7 |
mammalian vulva | 5.78e-07 | 1 |
external female genitalia | 5.78e-07 | 1 |
organ component layer | 6.92e-07 | 66 |
cornea | 7.75e-07 | 4 |
eye surface | 7.75e-07 | 4 |
optic eminence | 7.75e-07 | 4 |
corneal primordium | 7.75e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.73e-13 | 4 |
breast cancer | 1.73e-13 | 4 |
skin squamous cell carcinoma | 2.52e-07 | 1 |
keratoacanthoma | 2.52e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.