FFCP PHASE1:Hg19::chr20:18038521..18038571,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!1.49e-23!254;CL:0002076!1.32e-18!43;CL:0000223!9.64e-17!59;CL:0002368!1.65e-11!13;CL:0002159!7.82e-09!13;CL:0002202!1.26e-08!9;CL:0002632!1.26e-08!9;CL:0002251!2.25e-07!21;CL:0000082!4.47e-07!19 | |ontology_enrichment_celltype=CL:0000066!1.49e-23!254;CL:0002076!1.32e-18!43;CL:0000223!9.64e-17!59;CL:0002368!1.65e-11!13;CL:0002159!7.82e-09!13;CL:0002202!1.26e-08!9;CL:0002632!1.26e-08!9;CL:0002251!2.25e-07!21;CL:0000082!4.47e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.12e-16;42!CL:0002368;1.81e-12;13!CL:0002159;6.76e-10;14!CL:0002251;4.98e-09;20!CL:0002202;6.98e-09;9!CL:0002632;6.98e-09;9!CL:0000349;1.08e-07;19!CL:0000240;2.17e-07;6!CL:0000311;2.17e-07;6!CL:0000079;2.17e-07;6!CL:0000237;2.17e-07;6!CL:0000082;4.60e-07;19 | |ontology_enrichment_celltype_v019=CL:0002076;2.12e-16;42!CL:0002368;1.81e-12;13!CL:0002159;6.76e-10;14!CL:0002251;4.98e-09;20!CL:0002202;6.98e-09;9!CL:0002632;6.98e-09;9!CL:0000349;1.08e-07;19!CL:0000240;2.17e-07;6!CL:0000311;2.17e-07;6!CL:0000079;2.17e-07;6!CL:0000237;2.17e-07;6!CL:0000082;4.60e-07;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.92e-22,253;CL:0002076,2.10e-21,42;CL:0000223,2.36e-17,58;CL:0002368,1.38e-12,13;CL:0002159,5.46e-10,14;CL:0002251,3.39e-09,20;CL:0002202,6.57e-09,9;CL:0002632,6.57e-09,9;CL:0000349,1.10e-07,19;CL:0000240,2.25e-07,6;CL:0000311,2.25e-07,6;CL:0000079,2.25e-07,6;CL:0000237,2.25e-07,6;CL:0000036,2.25e-07,6;CL:0000357,2.25e-07,6;CL:0000114,2.25e-07,6;CL:0000082,4.20e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000223;1.88e-09;58!UBERON:0006595;5.79e-08;86!CL:0000357;2.17e-07;6!CL:0000114;2.17e-07;6 | |ontology_enrichment_development_v019=CL:0000223;1.88e-09;58!UBERON:0006595;5.79e-08;86!CL:0000357;2.17e-07;6!CL:0000114;2.17e-07;6 | ||
|ontology_enrichment_disease=DOID:305!1.10e-20!106;DOID:0050687!1.02e-13!143;DOID:1749!3.54e-11!14;DOID:299!1.13e-08!25 | |ontology_enrichment_disease=DOID:305!1.10e-20!106;DOID:0050687!1.02e-13!143;DOID:1749!3.54e-11!14;DOID:299!1.13e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.58e-10;14!DOID:299;2.63e-07;25!DOID:305;5.68e-07;106 | |ontology_enrichment_disease_v019=DOID:1749;1.58e-10;14!DOID:299;2.63e-07;25!DOID:305;5.68e-07;106 | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.16e-15,106;DOID:0050687,2.04e-11,143;DOID:1749,1.35e-10,14;DOID:299,2.61e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.89e-25!169;UBERON:0000925!1.89e-25!169;UBERON:0006595!1.89e-25!169;UBERON:0001007!6.30e-20!155;UBERON:0001555!6.30e-20!155;UBERON:0007026!6.30e-20!155;UBERON:0004921!1.34e-17!129;UBERON:0004185!1.34e-17!129;UBERON:0000077!4.02e-17!130;UBERON:0001004!2.40e-13!72;UBERON:0000464!3.62e-13!104;UBERON:0005153!1.54e-12!37;UBERON:0000466!1.62e-12!126;UBERON:0005911!2.89e-12!82;UBERON:0005178!1.75e-11!34;UBERON:0002224!1.75e-11!34;UBERON:0000065!4.58e-11!53;UBERON:0005181!6.30e-11!35;UBERON:0005631!1.25e-10!14;UBERON:0000158!1.25e-10!14;UBERON:0001041!1.39e-10!98;UBERON:0000062!4.92e-10!511;UBERON:0005156!2.51e-09!59;UBERON:0000990!2.51e-09!59;UBERON:0002048!3.48e-09!22;UBERON:0000117!3.48e-09!22;UBERON:0000171!3.48e-09!22;UBERON:0000170!3.48e-09!22;UBERON:0005597!3.48e-09!22;UBERON:0000118!3.48e-09!22;UBERON:0000915!6.73e-09!52;UBERON:0005157!1.23e-08!51;UBERON:0005177!1.76e-08!107;UBERON:0004175!2.78e-08!25;UBERON:0000161!3.42e-08!35;UBERON:0003124!4.42e-08!7;UBERON:0003133!5.23e-08!48;UBERON:0008947!5.64e-08!38;UBERON:0003258!5.64e-08!38;UBERON:0000064!9.07e-08!219;UBERON:0004807!2.07e-07!28;UBERON:0007196!2.39e-07!14;UBERON:0001558!2.39e-07!14;UBERON:0003101!2.51e-07!22;UBERON:0000079!2.51e-07!22;UBERON:0000072!2.92e-07!46;UBERON:0004802!4.47e-07!19;UBERON:0000115!4.47e-07!19;UBERON:0009569!6.42e-07!113;UBERON:0003135!9.17e-07!11;UBERON:0000468!9.43e-07!659 | |ontology_enrichment_uberon=UBERON:0004119!1.89e-25!169;UBERON:0000925!1.89e-25!169;UBERON:0006595!1.89e-25!169;UBERON:0001007!6.30e-20!155;UBERON:0001555!6.30e-20!155;UBERON:0007026!6.30e-20!155;UBERON:0004921!1.34e-17!129;UBERON:0004185!1.34e-17!129;UBERON:0000077!4.02e-17!130;UBERON:0001004!2.40e-13!72;UBERON:0000464!3.62e-13!104;UBERON:0005153!1.54e-12!37;UBERON:0000466!1.62e-12!126;UBERON:0005911!2.89e-12!82;UBERON:0005178!1.75e-11!34;UBERON:0002224!1.75e-11!34;UBERON:0000065!4.58e-11!53;UBERON:0005181!6.30e-11!35;UBERON:0005631!1.25e-10!14;UBERON:0000158!1.25e-10!14;UBERON:0001041!1.39e-10!98;UBERON:0000062!4.92e-10!511;UBERON:0005156!2.51e-09!59;UBERON:0000990!2.51e-09!59;UBERON:0002048!3.48e-09!22;UBERON:0000117!3.48e-09!22;UBERON:0000171!3.48e-09!22;UBERON:0000170!3.48e-09!22;UBERON:0005597!3.48e-09!22;UBERON:0000118!3.48e-09!22;UBERON:0000915!6.73e-09!52;UBERON:0005157!1.23e-08!51;UBERON:0005177!1.76e-08!107;UBERON:0004175!2.78e-08!25;UBERON:0000161!3.42e-08!35;UBERON:0003124!4.42e-08!7;UBERON:0003133!5.23e-08!48;UBERON:0008947!5.64e-08!38;UBERON:0003258!5.64e-08!38;UBERON:0000064!9.07e-08!219;UBERON:0004807!2.07e-07!28;UBERON:0007196!2.39e-07!14;UBERON:0001558!2.39e-07!14;UBERON:0003101!2.51e-07!22;UBERON:0000079!2.51e-07!22;UBERON:0000072!2.92e-07!46;UBERON:0004802!4.47e-07!19;UBERON:0000115!4.47e-07!19;UBERON:0009569!6.42e-07!113;UBERON:0003135!9.17e-07!11;UBERON:0000468!9.43e-07!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0005178;1.12e-11;34!UBERON:0002224;1.12e-11;34!UBERON:0005181;9.27e-11;35!UBERON:0002048;1.27e-09;22!UBERON:0000117;1.27e-09;22!UBERON:0000171;1.27e-09;22!UBERON:0000170;1.27e-09;22!UBERON:0004921;2.89e-09;33!UBERON:0004807;3.95e-09;22!UBERON:0005631;7.29e-09;10!UBERON:0000158;7.29e-09;10!UBERON:0005911;1.20e-07;36!UBERON:0000065;1.27e-07;44!UBERON:0000915;1.54e-07;52!UBERON:0000974;2.14e-07;6!UBERON:0001555;2.34e-07;54!UBERON:0007196;2.66e-07;15!UBERON:0001558;2.66e-07;15!UBERON:0004802;4.60e-07;19!UBERON:0000115;4.60e-07;19!UBERON:0005409;9.62e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0005178;1.12e-11;34!UBERON:0002224;1.12e-11;34!UBERON:0005181;9.27e-11;35!UBERON:0002048;1.27e-09;22!UBERON:0000117;1.27e-09;22!UBERON:0000171;1.27e-09;22!UBERON:0000170;1.27e-09;22!UBERON:0004921;2.89e-09;33!UBERON:0004807;3.95e-09;22!UBERON:0005631;7.29e-09;10!UBERON:0000158;7.29e-09;10!UBERON:0005911;1.20e-07;36!UBERON:0000065;1.27e-07;44!UBERON:0000915;1.54e-07;52!UBERON:0000974;2.14e-07;6!UBERON:0001555;2.34e-07;54!UBERON:0007196;2.66e-07;15!UBERON:0001558;2.66e-07;15!UBERON:0004802;4.60e-07;19!UBERON:0000115;4.60e-07;19!UBERON:0005409;9.62e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.45e-25,160;UBERON:0000925,1.45e-25,160;UBERON:0006595,1.45e-25,160;UBERON:0001007,6.82e-20,145;UBERON:0001555,6.82e-20,145;UBERON:0007026,6.82e-20,145;UBERON:0004921,4.60e-17,118;UBERON:0001004,3.46e-14,74;UBERON:0005631,1.88e-13,14;UBERON:0000158,1.88e-13,14;UBERON:0005178,3.49e-13,34;UBERON:0002224,3.49e-13,34;UBERON:0005181,1.29e-12,35;UBERON:0005153,1.73e-12,37;UBERON:0000915,3.74e-11,52;UBERON:0000065,6.89e-11,54;UBERON:0005911,8.83e-11,82;UBERON:0005157,1.17e-10,47;UBERON:0001041,5.78e-10,87;UBERON:0000161,6.86e-10,36;UBERON:0003124,6.90e-10,7;UBERON:0002048,1.23e-09,22;UBERON:0000117,1.23e-09,22;UBERON:0000171,1.23e-09,22;UBERON:0000170,1.23e-09,22;UBERON:0005597,1.23e-09,22;UBERON:0000118,1.23e-09,22;UBERON:0008947,1.35e-08,38;UBERON:0003258,1.35e-08,38;UBERON:0004175,9.39e-08,25;UBERON:0005177,9.82e-08,101;UBERON:0007196,2.27e-07,15;UBERON:0001558,2.27e-07,15;UBERON:0004802,4.20e-07,19;UBERON:0000115,4.20e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.96587149201207,9.07141518364156,5.46103430325431,6.33040747748289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,5.51652734687356,3.31326510656075,4.80680213216824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48860243445654,4.37154345951051,7.78647329847302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.97750483428055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12586938479627,1.90922284413584,2.58124135850103,1.95157929807353,1.19276791489337,1.74290914304278,0.414644220061482,2.27088765788066,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0,0,0,2.82873408649161,0,2.85350742062426,3.37205259772859,6.8359701239909,3.51836091602412,0,0,0,0,0,0,0,0,2.37061319387782,7.72637545885385,0,0,0,1.87467667973554,1.51183915378974,1.27597587518148,0.895585227028483,1.74380363108377,5.75074018747817,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0,0,0,0,0,0,10.6094650006191,6.65741758041988,9.37409909322009,0,0,0,0,0,0,0,0,0,0,0,0,2.53804844142407,2.6065841139427,8.10312702635888,0,0,0,0.451199612907412,0.539107359730903,0.784349769176855,0,0.211103257785751,0,0,0,0,0,0,1.27438136522519,1.66215201785745,0.447749509444357,0,0,0,0,0,2.06082023295445,0,0,1.72279661398852,1.95018073810956,0,0,0,0,0,0,0,0,0,1.81813406897076,2.30628080838127,3.82838137483752,4.95673126192195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23377295992253,6.03272047982209,5.44454924306613,1.50630081242847,0.86101074534246,0,5.32116184244011,3.44585100310439,0,0,0,0,0,0,0,0,0,0,5.14584453560167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614481528616916,0.894704431569664,0.166849141711909,0,0,0,0,0,0,10.4798702628603,0,0,0,0.284136146806413,7.1623345421307,8.90894042497916,6.45037474408387,0,0,0,0,0.422250816255987,0.996239941255349,2.48655523978033,2.26739473068848,0.102268682502155,0,0,2.96565558786179,6.26574111364632,0,1.57829449019094,0,0,0,0,0,4.16684417736373,8.1337799996462,1.44999915086959,1.93448862085349,4.06805840468426,5.67330436243047,3.10269035917318,0,0.173624994933292,0,0,0,0,0,0,0,4.60098356119391,1.76985594558733,0,4.6112780877612,8.61673386333812,6.08425282763245,4.46601623624687,3.11431817566332,10.6606955203727,0,0,0,0,0,0,0,0,0.843992258112108,4.24405301213784,2.68570835724488,0,14.9289289661776,6.5458597732471,3.66618086960175,0,0,0,0,0,0,0,3.91329237864179,0,11.0483632797829,3.62972148145992,0.30607276163049,0,0,0.414752765588989,0,0,0.313932918407225,0,0.853828638089378,0,8.15730770175115,0.979923974143776,5.04943398166335,2.09672001890436,0,0,0,0,5.14041787388623,0,2.48578814858586,0,0,0.126621591911757,6.6487470129833,0.64127056201227,6.40358984218058,0.19980960958213,3.45817001169854,0,0,0,0,3.53541051925193,0,0,0,0,0,0,0,0,0,0,0,0,2.39614800598789,0,0,0,0,1.16495949527454,0.0787831823072236,0.247247575143499,0.202210631562555,0,0,0,0.136203406111576,3.05430982083536,2.75078873194468,0.83088067605837,0,2.32140586367385,0.303747783290123,7.04412843958459,1.10327990218877,1.88836517285993,0,0,1.15149118391667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,1.40963004463334,4.27149650270779,2.35806457649499,5.38510771951354,0,0.395223263795889,1.58330377895165,2.55336503108073,0,0,0,0,9.73735396751453,0,0.122026264901963,0.1251909307065,0,0,0,0,0.124980407962107,0,0,0,2.34167452903441,2.17381542916238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,5.17554178561945,1.24415452006595,0,0,0,0,0,0,0,0,0,0,3.20228299314188,0,0,0,0,0,0,0,0.0691572524642179,0,0,3.92590874004102,2.35939446695481,2.56800037930351,3.58129565066048,0,0,0,0.451261970095544,0,7.03362610109783,7.59529413996125,0,1.77427303460454,0.135075169236789,0,0.206686796501184,0.126831620387814,0,4.93431990171464,0.992422356778588,0,1.40538670403555,0,0,1.82089681270989,1.13831095675649,1.77404740325278,0,0,0,0.460409414939944,0.118193840883968,2.55832224351759,5.41602340668547,0,1.96190514319652,0.913158720509496,0,0,0,0,0,0,0,0,0,0,9.03477453522583,0,0,9.31451510420044,3.43660302816075,0,0,3.46751838573156,8.24461962368041,3.53561982448581,0,0,0,3.88568794447312,0.935757853848423,1.39265542612958,0,5.42141193787008,0,2.71733118420012,6.40545512295941,1.5299169235277,2.82190377816914,0.245148321753905,2.35676547101626,0,0,0,0,0,0,0,5.53517209677539,3.17605384544123,2.72820646743172,7.30336388246517,2.2936464170227,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0.126698501011437,1.22386595690378,3.47382626845229,1.74600309116205,0.752122617877125,0.682008283964155,0.80389239046853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| ||
|short_description=p1@OVOL2 | |short_description=p1@OVOL2 | ||
}} | }} |
Revision as of 07:18, 19 November 2012
Short description: | p1@OVOL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_OVOL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000278780, NM_021220, uc002wqi.1_5end |
EntrezGene: | OVOL2 |
HGNC: | 15804 |
UniProt: | Q9BRP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.92e-22 | 253 |
endo-epithelial cell | 2.10e-21 | 42 |
endodermal cell | 2.36e-17 | 58 |
respiratory epithelial cell | 1.38e-12 | 13 |
general ecto-epithelial cell | 5.46e-10 | 14 |
epithelial cell of alimentary canal | 3.39e-09 | 20 |
epithelial cell of tracheobronchial tree | 6.57e-09 | 9 |
epithelial cell of lower respiratory tract | 6.57e-09 | 9 |
extraembryonic cell | 1.10e-07 | 19 |
stratified squamous epithelial cell | 2.25e-07 | 6 |
keratin accumulating cell | 2.25e-07 | 6 |
stratified epithelial cell | 2.25e-07 | 6 |
keratinizing barrier epithelial cell | 2.25e-07 | 6 |
epithelial fate stem cell | 2.25e-07 | 6 |
stratified epithelial stem cell | 2.25e-07 | 6 |
surface ectodermal cell | 2.25e-07 | 6 |
epithelial cell of lung | 4.20e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.45e-25 | 160 |
endoderm | 1.45e-25 | 160 |
presumptive endoderm | 1.45e-25 | 160 |
digestive system | 6.82e-20 | 145 |
digestive tract | 6.82e-20 | 145 |
primitive gut | 6.82e-20 | 145 |
subdivision of digestive tract | 4.60e-17 | 118 |
respiratory system | 3.46e-14 | 74 |
extraembryonic membrane | 1.88e-13 | 14 |
membranous layer | 1.88e-13 | 14 |
thoracic cavity element | 3.49e-13 | 34 |
thoracic cavity | 3.49e-13 | 34 |
thoracic segment organ | 1.29e-12 | 35 |
epithelial bud | 1.73e-12 | 37 |
thoracic segment of trunk | 3.74e-11 | 52 |
respiratory tract | 6.89e-11 | 54 |
endo-epithelium | 8.83e-11 | 82 |
epithelial fold | 1.17e-10 | 47 |
foregut | 5.78e-10 | 87 |
orifice | 6.86e-10 | 36 |
chorion | 6.90e-10 | 7 |
lung | 1.23e-09 | 22 |
respiratory tube | 1.23e-09 | 22 |
respiration organ | 1.23e-09 | 22 |
pair of lungs | 1.23e-09 | 22 |
lung primordium | 1.23e-09 | 22 |
lung bud | 1.23e-09 | 22 |
respiratory primordium | 1.35e-08 | 38 |
endoderm of foregut | 1.35e-08 | 38 |
internal genitalia | 9.39e-08 | 25 |
trunk region element | 9.82e-08 | 101 |
tracheobronchial tree | 2.27e-07 | 15 |
lower respiratory tract | 2.27e-07 | 15 |
respiratory tract epithelium | 4.20e-07 | 19 |
lung epithelium | 4.20e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.16e-15 | 106 |
cell type cancer | 2.04e-11 | 143 |
squamous cell carcinoma | 1.35e-10 | 14 |
adenocarcinoma | 2.61e-07 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.