FFCP PHASE1:Hg19::chr5:169694054..169694090,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3937 | |EntrezGene=3937 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6529 | |HGNC=6529 | ||
|TSSclassifier=W | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=173bp_to_uc011des.1_5end | |association_with_transcript=173bp_to_uc011des.1_5end |
Revision as of 02:58, 10 July 2013
Short description: | p5@LCP2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_LCP2_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | 173bp_to_uc011des.1_5end |
EntrezGene: | LCP2 |
HGNC: | 6529 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@LCP2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 7.30e-78 | 72 |
defensive cell | 4.62e-71 | 48 |
phagocyte | 4.62e-71 | 48 |
myeloid lineage restricted progenitor cell | 5.86e-69 | 66 |
granulocyte monocyte progenitor cell | 1.03e-67 | 67 |
classical monocyte | 1.48e-64 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.48e-64 | 42 |
monopoietic cell | 1.25e-62 | 59 |
monocyte | 1.25e-62 | 59 |
monoblast | 1.25e-62 | 59 |
Showing 1 to 10 of 34 entries
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.87e-63 | 98 |
blood island | 1.87e-63 | 98 |
hemolymphoid system | 3.05e-58 | 108 |
bone marrow | 5.49e-58 | 76 |
immune system | 2.29e-53 | 93 |
bone element | 1.11e-52 | 82 |
skeletal element | 1.06e-46 | 90 |
skeletal system | 1.43e-40 | 100 |
lateral plate mesoderm | 5.88e-22 | 203 |
musculoskeletal system | 1.40e-18 | 167 |
Showing 1 to 10 of 14 entries
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.