FFCP PHASE1:Hg19::chr10:121596306..121596309,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:121596306..121596309,+|id=chr10:121596306..121596309,+|ontology_enrichment_celltype=CL:0000037!1.74e-09!172;CL:0000566!1.74e-09!172;CL:0002032!4.43e-09!165;CL:0000837!4.43e-09!165;CL:0000988!8.42e-09!182;CL:0002087!2.42e-08!119;CL:0002031!4.19e-08!124;CL:0000838!1.24e-07!52;CL:0000542!2.16e-07!53;CL:0000051!2.16e-07!53;CL:0000738!2.62e-07!140|ontology_enrichment_celltype_v019=CL:0000226;1.21e-08;3!CL:0000842;1.21e-08;3!CL:0000236;1.02e-07;13|ontology_enrichment_celltype_v019_2=CL:0000226,1.12e-08,3;CL:0000842,1.12e-08,3;CL:0000236,3.24e-07,14|ontology_enrichment_development_v019=UBERON:0005425;1.06e-23;1!UBERON:0003056;8.31e-09;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1909;1.65e-12;2!DOID:8692;3.10e-07;31!DOID:5093;8.61e-07;4!DOID:1612;8.61e-07;4|ontology_enrichment_disease_v019_2=DOID:1909,1.65e-12,2;DOID:8692,4.87e-07,31;DOID:5093,9.63e-07,4;DOID:1612,9.63e-07,4|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000941;1.06e-23;1!UBERON:0001785;1.06e-23;1!UBERON:0002464;1.06e-23;1!UBERON:0004904;1.06e-23;1!UBERON:0001021;1.06e-23;1!UBERON:0003714;1.48e-12;2!UBERON:0005162;1.48e-12;2!UBERON:0000122;1.48e-12;2|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.07e-23,1;UBERON:0001785,1.07e-23,1;UBERON:0002464,1.07e-23,1;UBERON:0004904,1.07e-23,1;UBERON:0001021,1.07e-23,1;UBERON:0003902,1.07e-23,1;UBERON:0005425,1.07e-23,1;UBERON:0003714,1.48e-12,2;UBERON:0005162,1.48e-12,2;UBERON:0000122,1.48e-12,2;UBERON:0001781,6.50e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0.309868802321207,0,0,0,0,0.868043482863407,0,0,0,0,0,0,0.232429036905685,0,0.619412741790207,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0.329851300186716,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0.419317291016752,0.112328631146495,0,0.803627933485401,0,0,0.182664153764634,0,0.546138611262131,0,0.426730222566507,0,0.574752439954483,0,0,1.1384259382189,1.17447437874188,0,0,0,0,0.983548850569165,0,0.205601498999509,0,0.32592226663359,0,0,0.111410456885174,0.589211814949674,0.221533894583621,0.541607727530031,0,0.390178042679635,0,0.276350017785848,0,0,0,0,0.226618685395132,0,0,0.759059076058509,0,0,0,0,0,0,0,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.394061520403854,0,0.385029108839245,0.508189248444927,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,1.52362600021443,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,0.284136146806413,0.23874448473769,0,0,0,0,0,0,0.63337622438398,0,0,0.251932747854276,0.20453736500431,0,0,0.269605053441981,0,1.02314474045374,0,0,0,0,0,0,1.04171104434093,0,0,0,0.254253650292766,0,0.344743373241465,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0.278847488557207,0.153900517007594,0,0,0,0,0,0,0,0,0.470940769185074,0.166211681900156,0,0,0.167821586975843,0.189753732724185,0.317873157960757,0,0,0.282706142867882,0,0,0.176915129006678,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0.0870592065804026,0,0.171986032471617,0,0,0,0,0.0882561266915003,0,0,0,0,0,0.0801588202515337,0,0,0,0.114536596165916,0,0.14405479798815,0,0,0.271808412147228,0.523014231561666,0,0,0,0,0,0,0.525774708558629,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0.2249738915515,0,0,0.670869375198532,0.0788057072991982,0,0.316801009558219,0,0,0.714695326373367,0,0.25426853765475,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0.197611631897944,0.365377795142688,0,0,0.2506898940227,0,0,0,0,0,0.250381861413,0,0,0,0.138348634936231,0.124980407962107,2.12308764558307,0.285465333544967,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0.314531883711793,0,0,0,0,0,0,0,0,0,0,0.06422922509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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:121596306..121596309,+ | |||
|id=chr10:121596306..121596309,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.74e-09!172;CL:0000566!1.74e-09!172;CL:0002032!4.43e-09!165;CL:0000837!4.43e-09!165;CL:0000988!8.42e-09!182;CL:0002087!2.42e-08!119;CL:0002031!4.19e-08!124;CL:0000838!1.24e-07!52;CL:0000542!2.16e-07!53;CL:0000051!2.16e-07!53;CL:0000738!2.62e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000226;1.21e-08;3!CL:0000842;1.21e-08;3!CL:0000236;1.02e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000226,1.12e-08,3;CL:0000842,1.12e-08,3;CL:0000236,3.24e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.06e-23;1!UBERON:0003056;8.31e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;1.65e-12;2!DOID:8692;3.10e-07;31!DOID:5093;8.61e-07;4!DOID:1612;8.61e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.65e-12,2;DOID:8692,4.87e-07,31;DOID:5093,9.63e-07,4;DOID:1612,9.63e-07,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.06e-23;1!UBERON:0001785;1.06e-23;1!UBERON:0002464;1.06e-23;1!UBERON:0004904;1.06e-23;1!UBERON:0001021;1.06e-23;1!UBERON:0003714;1.48e-12;2!UBERON:0005162;1.48e-12;2!UBERON:0000122;1.48e-12;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.07e-23,1;UBERON:0001785,1.07e-23,1;UBERON:0002464,1.07e-23,1;UBERON:0004904,1.07e-23,1;UBERON:0001021,1.07e-23,1;UBERON:0003902,1.07e-23,1;UBERON:0005425,1.07e-23,1;UBERON:0003714,1.48e-12,2;UBERON:0005162,1.48e-12,2;UBERON:0000122,1.48e-12,2;UBERON:0001781,6.50e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0.309868802321207,0,0,0,0,0.868043482863407,0,0,0,0,0,0,0.232429036905685,0,0.619412741790207,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0.329851300186716,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0.419317291016752,0.112328631146495,0,0.803627933485401,0,0,0.182664153764634,0,0.546138611262131,0,0.426730222566507,0,0.574752439954483,0,0,1.1384259382189,1.17447437874188,0,0,0,0,0.983548850569165,0,0.205601498999509,0,0.32592226663359,0,0,0.111410456885174,0.589211814949674,0.221533894583621,0.541607727530031,0,0.390178042679635,0,0.276350017785848,0,0,0,0,0.226618685395132,0,0,0.759059076058509,0,0,0,0,0,0,0,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.394061520403854,0,0.385029108839245,0.508189248444927,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,1.52362600021443,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,0.284136146806413,0.23874448473769,0,0,0,0,0,0,0.63337622438398,0,0,0.251932747854276,0.20453736500431,0,0,0.269605053441981,0,1.02314474045374,0,0,0,0,0,0,1.04171104434093,0,0,0,0.254253650292766,0,0.344743373241465,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0.278847488557207,0.153900517007594,0,0,0,0,0,0,0,0,0.470940769185074,0.166211681900156,0,0,0.167821586975843,0.189753732724185,0.317873157960757,0,0,0.282706142867882,0,0,0.176915129006678,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0.0870592065804026,0,0.171986032471617,0,0,0,0,0.0882561266915003,0,0,0,0,0,0.0801588202515337,0,0,0,0.114536596165916,0,0.14405479798815,0,0,0.271808412147228,0.523014231561666,0,0,0,0,0,0,0.525774708558629,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0.2249738915515,0,0,0.670869375198532,0.0788057072991982,0,0.316801009558219,0,0,0.714695326373367,0,0.25426853765475,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0.197611631897944,0.365377795142688,0,0,0.2506898940227,0,0,0,0,0,0.250381861413,0,0,0,0.138348634936231,0.124980407962107,2.12308764558307,0.285465333544967,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0.314531883711793,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.504143392443436,0,0,4.28308260777463,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.921871900446234,0,0.0679697329768317,0,0,0.333694205676207,0,0,0.280272163313789,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0.207216164163037,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0.297046400327086,0,0,0,0,0.199882311849858,0,0.352894871715692,0,0,0,0.143339583151451,0,0,0.436350690340377,0,0,0,0,0,0.218531143927391,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0.213454691755431,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:121596306..121596309,+ | |||
}} |
Revision as of 12:03, 10 September 2013
Short description: | p@chr10:121596306..121596309, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:121596306..121596309, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
single nucleate cell | 1.12e-08 | 3 |
mononuclear cell | 1.12e-08 | 3 |
B cell | 3.24e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.07e-23 | 1 |
cranial nerve | 1.07e-23 | 1 |
nerve trunk | 1.07e-23 | 1 |
nerve connecting eye with brain | 1.07e-23 | 1 |
nerve | 1.07e-23 | 1 |
retinal neural layer | 1.07e-23 | 1 |
presumptive neural retina | 1.07e-23 | 1 |
neural tissue | 1.48e-12 | 2 |
multi cell component structure | 1.48e-12 | 2 |
neuron projection bundle | 1.48e-12 | 2 |
layer of retina | 6.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.65e-12 | 2 |
myeloid leukemia | 4.87e-07 | 31 |
thoracic cancer | 9.63e-07 | 4 |
breast cancer | 9.63e-07 | 4 |
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