FFCP PHASE1:Hg19::chr10:35013710..35013742,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C276|description=CAGE_peak_at_chr10:35013710..35013742,+|id=chr10:35013710..35013742,+|ontology_enrichment_celltype=CL:0000946!1.75e-12!1;CL:0000786!1.75e-12!1;CL:0000980!1.75e-12!1;CL:0000945!1.71e-07!24;CL:0000826!1.71e-07!24;CL:0002596!6.07e-07!2;CL:0000815!6.42e-07!2;CL:0000792!6.42e-07!2;CL:0002677!6.42e-07!2;CL:0000785!7.20e-07!2;CL:0000955!7.20e-07!2;CL:0000818!7.20e-07!2;CL:0000954!7.20e-07!2;CL:0000816!7.20e-07!2|ontology_enrichment_celltype_v019=CL:0000239;1.12e-17;3!CL:1000615;1.12e-17;3!CL:0002306;1.12e-17;3!CL:1000497;1.16e-12;17!CL:0002518;1.16e-12;17|ontology_enrichment_celltype_v019_2=CL:0000239,1.12e-17,3;CL:1000615,1.12e-17,3;CL:0002306,1.12e-17,3;CL:1000497,1.16e-12,17;CL:0002518,1.16e-12,17|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:4468!1.01e-23!2|ontology_enrichment_disease_v019=DOID:4468;5.56e-26;2|ontology_enrichment_disease_v019_2=DOID:4468,5.56e-26,2|ontology_enrichment_uberon=UBERON:0002336!3.08e-12!1;UBERON:0001018!3.08e-12!1;UBERON:0002473!3.08e-12!1;UBERON:0005340!3.08e-12!1;UBERON:0002316!3.08e-12!1;UBERON:0003544!3.08e-12!1;UBERON:0001020!3.08e-12!1;UBERON:0005970!3.08e-12!1;UBERON:0002437!3.08e-12!1;UBERON:0000489!1.24e-08!32;UBERON:0005396!6.07e-07!2;UBERON:0002113!7.58e-07!27;UBERON:0003918!7.58e-07!27;UBERON:0005095!7.58e-07!27;UBERON:0007687!7.58e-07!27;UBERON:0001954!9.02e-07!2;UBERON:0003022!9.02e-07!2;UBERON:0002421!9.02e-07!2;UBERON:0002600!9.02e-07!2;UBERON:0005162!9.54e-07!2;UBERON:0000122!9.54e-07!2|ontology_enrichment_uberon_v019=UBERON:0006853;1.12e-17;3!UBERON:0007685;1.12e-17;3!UBERON:0004134;1.12e-17;3!UBERON:0002113;2.78e-09;24!UBERON:0011143;2.78e-09;24!UBERON:0000489;7.40e-08;29!UBERON:0006554;1.25e-07;30!UBERON:0001008;1.25e-07;30|ontology_enrichment_uberon_v019_2=UBERON:0006853,1.12e-17,3;UBERON:0007685,1.12e-17,3;UBERON:0004134,1.12e-17,3;UBERON:0002113,1.20e-08,26;UBERON:0003918,1.20e-08,26;UBERON:0011143,1.20e-08,26;UBERON:0005095,1.20e-08,26;UBERON:0007687,1.20e-08,26;UBERON:0000489,2.05e-07,31|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52925763827023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.79796516150449,0.816164040795739,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.236417121897595,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.567638935021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,2.15927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:35013710..35013742,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C276 | |||
|description=CAGE_peak_at_chr10:35013710..35013742,+ | |||
|id=chr10:35013710..35013742,+ | |||
|ontology_enrichment_celltype=CL:0000946!1.75e-12!1;CL:0000786!1.75e-12!1;CL:0000980!1.75e-12!1;CL:0000945!1.71e-07!24;CL:0000826!1.71e-07!24;CL:0002596!6.07e-07!2;CL:0000815!6.42e-07!2;CL:0000792!6.42e-07!2;CL:0002677!6.42e-07!2;CL:0000785!7.20e-07!2;CL:0000955!7.20e-07!2;CL:0000818!7.20e-07!2;CL:0000954!7.20e-07!2;CL:0000816!7.20e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000239;1.12e-17;3!CL:1000615;1.12e-17;3!CL:0002306;1.12e-17;3!CL:1000497;1.16e-12;17!CL:0002518;1.16e-12;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.12e-17,3;CL:1000615,1.12e-17,3;CL:0002306,1.12e-17,3;CL:1000497,1.16e-12,17;CL:0002518,1.16e-12,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4468!1.01e-23!2 | |||
|ontology_enrichment_disease_v019=DOID:4468;5.56e-26;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,5.56e-26,2 | |||
|ontology_enrichment_uberon=UBERON:0002336!3.08e-12!1;UBERON:0001018!3.08e-12!1;UBERON:0002473!3.08e-12!1;UBERON:0005340!3.08e-12!1;UBERON:0002316!3.08e-12!1;UBERON:0003544!3.08e-12!1;UBERON:0001020!3.08e-12!1;UBERON:0005970!3.08e-12!1;UBERON:0002437!3.08e-12!1;UBERON:0000489!1.24e-08!32;UBERON:0005396!6.07e-07!2;UBERON:0002113!7.58e-07!27;UBERON:0003918!7.58e-07!27;UBERON:0005095!7.58e-07!27;UBERON:0007687!7.58e-07!27;UBERON:0001954!9.02e-07!2;UBERON:0003022!9.02e-07!2;UBERON:0002421!9.02e-07!2;UBERON:0002600!9.02e-07!2;UBERON:0005162!9.54e-07!2;UBERON:0000122!9.54e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;1.12e-17;3!UBERON:0007685;1.12e-17;3!UBERON:0004134;1.12e-17;3!UBERON:0002113;2.78e-09;24!UBERON:0011143;2.78e-09;24!UBERON:0000489;7.40e-08;29!UBERON:0006554;1.25e-07;30!UBERON:0001008;1.25e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,1.12e-17,3;UBERON:0007685,1.12e-17,3;UBERON:0004134,1.12e-17,3;UBERON:0002113,1.20e-08,26;UBERON:0003918,1.20e-08,26;UBERON:0011143,1.20e-08,26;UBERON:0005095,1.20e-08,26;UBERON:0007687,1.20e-08,26;UBERON:0000489,2.05e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52925763827023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.79796516150449,0.816164040795739,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.236417121897595,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.567638935021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,2.15927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:35013710..35013742,+ | |||
}} |
Revision as of 13:16, 10 September 2013
Short description: | p@chr10:35013710..35013742, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:35013710..35013742, + |
Coexpression cluster: | C276_mesothelioma_kidney_renal_small_clear_cerebellum_Renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.12e-17 | 3 |
kidney cortex tubule cell | 1.12e-17 | 3 |
epithelial cell of proximal tubule | 1.12e-17 | 3 |
kidney cell | 1.16e-12 | 17 |
kidney epithelial cell | 1.16e-12 | 17 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 1.12e-17 | 3 |
region of nephron tubule | 1.12e-17 | 3 |
proximal tubule | 1.12e-17 | 3 |
kidney | 1.20e-08 | 26 |
kidney mesenchyme | 1.20e-08 | 26 |
upper urinary tract | 1.20e-08 | 26 |
kidney rudiment | 1.20e-08 | 26 |
kidney field | 1.20e-08 | 26 |
cavitated compound organ | 2.05e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 5.56e-26 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.