FFCP PHASE1:Hg19::chr10:52178108..52178181,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=259230 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29799 | |||
|TSSclassifier=W | |||
|UniProt=E6ZCI7 | |||
|association_with_transcript=-168bp_to_FN908146,FN985166_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_SGMS1_5end | |||
|id=chr10:52178108..52178181,- | |||
|ontology_enrichment_celltype=CL:0000839!4.06e-25!70;CL:0000557!1.27e-24!71;CL:0000860!4.81e-24!45;CL:0002009!1.29e-23!65;CL:0002057!6.39e-23!42;CL:0002194!1.99e-22!63;CL:0000576!1.99e-22!63;CL:0000040!1.99e-22!63;CL:0000559!1.99e-22!63;CL:0000766!7.60e-21!76;CL:0000763!6.05e-15!112;CL:0000049!6.05e-15!112;CL:0002031!7.13e-09!124;CL:0000134!3.18e-08!358;CL:0002320!1.70e-07!365;CL:0000738!1.84e-07!140;CL:0002087!5.76e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.63e-20;33!CL:0002057;2.63e-20;33!CL:0000473;8.93e-20;39!CL:0000234;8.93e-20;39!CL:0000576;3.45e-14;48!CL:0000766;4.30e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.67e-26,48;CL:0000234,2.67e-26,48;CL:0000839,2.93e-24,66;CL:0000557,9.41e-24,67;CL:0000860,5.23e-23,42;CL:0002057,5.23e-23,42;CL:0002009,9.10e-23,61;CL:0002194,1.41e-21,59;CL:0000576,1.41e-21,59;CL:0000040,1.41e-21,59;CL:0000559,1.41e-21,59;CL:0000766,3.11e-20,72;CL:0000763,1.69e-14,108;CL:0000049,1.69e-14,108;CL:0002031,3.73e-08,120;CL:0000134,8.17e-08,354;CL:0002320,4.40e-07,361;CL:0000738,5.76e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;5.22e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.43e-22!80;UBERON:0001474!3.92e-20!86;UBERON:0004765!5.37e-20!101;UBERON:0001434!5.37e-20!101;UBERON:0002390!1.25e-18!102;UBERON:0003061!1.25e-18!102;UBERON:0002193!1.13e-15!112;UBERON:0002405!3.84e-12!115;UBERON:0002204!4.55e-11!167;UBERON:0000062!1.61e-10!511;UBERON:0000926!3.63e-07!448;UBERON:0004120!3.63e-07!448;UBERON:0006603!3.63e-07!448;UBERON:0003081!3.85e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.75e-21,76;UBERON:0001474,3.48e-19,82;UBERON:0004765,1.05e-17,90;UBERON:0002390,1.18e-17,98;UBERON:0003061,1.18e-17,98;UBERON:0001434,1.37e-17,100;UBERON:0002405,2.36e-15,93;UBERON:0002193,1.17e-14,108;UBERON:0002204,1.34e-09,167 | |||
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| |||
|short_description=p2@SGMS1 | |||
}} |
Revision as of 13:37, 10 September 2013
Short description: | p2@SGMS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SGMS1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -168bp_to_FN908146, FN985166_5end |
EntrezGene: | SGMS1 |
HGNC: | 29799 |
UniProt: | E6ZCI7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.67e-26 | 48 |
phagocyte | 2.67e-26 | 48 |
myeloid lineage restricted progenitor cell | 2.93e-24 | 66 |
granulocyte monocyte progenitor cell | 9.41e-24 | 67 |
classical monocyte | 5.23e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.23e-23 | 42 |
macrophage dendritic cell progenitor | 9.10e-23 | 61 |
monopoietic cell | 1.41e-21 | 59 |
monocyte | 1.41e-21 | 59 |
monoblast | 1.41e-21 | 59 |
promonocyte | 1.41e-21 | 59 |
myeloid leukocyte | 3.11e-20 | 72 |
myeloid cell | 1.69e-14 | 108 |
common myeloid progenitor | 1.69e-14 | 108 |
hematopoietic lineage restricted progenitor cell | 3.73e-08 | 120 |
mesenchymal cell | 8.17e-08 | 354 |
connective tissue cell | 4.40e-07 | 361 |
leukocyte | 5.76e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.75e-21 | 76 |
bone element | 3.48e-19 | 82 |
skeletal element | 1.05e-17 | 90 |
hematopoietic system | 1.18e-17 | 98 |
blood island | 1.18e-17 | 98 |
skeletal system | 1.37e-17 | 100 |
immune system | 2.36e-15 | 93 |
hemolymphoid system | 1.17e-14 | 108 |
musculoskeletal system | 1.34e-09 | 167 |
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