FFCP PHASE1:Hg19::chr10:73848549..73848564,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9806|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13564|TSSclassifier=S|UniProt=A6NIR4,Q92563|association_with_transcript=-18bp_to_ENST00000373109,NM_001244950,uc001jso.1_5end|coexpression_cluster_id=C524|description=CAGE_peak_13_at_SPOCK2_5end|id=chr10:73848549..73848564,-|ontology_enrichment_celltype=CL:0000242!9.22e-07!2|ontology_enrichment_celltype_v019=CL:0000650;7.09e-34;2!CL:1000500;7.09e-34;2!CL:1000618;7.09e-34;2!CL:1001318;7.09e-34;2!CL:0002173;7.09e-34;2!CL:0000669;1.71e-17;4!CL:1000746;2.04e-10;7!CL:1000612;2.04e-10;7!CL:1000415;8.69e-10;2!CL:0000123;1.64e-09;2!CL:0000242;1.64e-09;2!CL:1000507;1.47e-07;10!CL:1000494;1.47e-07;10|ontology_enrichment_celltype_v019_2=CL:0000650,8.39e-34,2;CL:1000500,8.39e-34,2;CL:1000618,8.39e-34,2;CL:1001318,8.39e-34,2;CL:0002173,8.39e-34,2;CL:0000669,1.86e-17,4;CL:1000746,2.14e-10,7;CL:1000612,2.14e-10,7;CL:1000415,8.69e-10,2;CL:0000242,1.33e-09,2;CL:1000507,1.52e-07,10;CL:1000494,1.52e-07,10|ontology_enrichment_development_v019=UBERON:0006215;9.37e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.65e-53!57;UBERON:0005068!2.65e-53!57;UBERON:0006241!2.65e-53!57;UBERON:0007135!2.65e-53!57;UBERON:0002616!2.50e-42!59;UBERON:0001017!4.67e-42!82;UBERON:0005743!1.04e-41!86;UBERON:0000073!8.60e-39!94;UBERON:0001016!8.60e-39!94;UBERON:0000955!1.53e-36!69;UBERON:0006238!1.53e-36!69;UBERON:0002780!1.66e-36!41;UBERON:0001890!1.66e-36!41;UBERON:0006240!1.66e-36!41;UBERON:0003075!9.02e-36!86;UBERON:0007284!9.02e-36!86;UBERON:0003080!1.78e-35!42;UBERON:0002020!1.01e-34!34;UBERON:0003528!1.01e-34!34;UBERON:0001893!1.15e-34!34;UBERON:0001869!5.55e-34!32;UBERON:0002346!1.06e-33!90;UBERON:0002791!1.50e-32!33;UBERON:0007023!9.75e-31!115;UBERON:0003056!4.47e-24!61;UBERON:0002619!6.97e-24!22;UBERON:0001950!2.22e-23!20;UBERON:0000956!2.52e-23!25;UBERON:0000203!2.52e-23!25;UBERON:0000153!1.64e-21!129;UBERON:0007811!1.64e-21!129;UBERON:0004121!4.75e-19!169;UBERON:0000033!7.91e-19!123;UBERON:0003076!9.17e-19!15;UBERON:0003057!9.17e-19!15;UBERON:0000924!2.42e-18!173;UBERON:0006601!2.42e-18!173;UBERON:0000025!1.50e-15!194;UBERON:0002308!4.79e-13!9;UBERON:0000125!4.79e-13!9;UBERON:0004733!1.43e-12!12;UBERON:0002028!1.43e-12!12;UBERON:0007277!1.43e-12!12;UBERON:0004732!1.73e-11!13;UBERON:0002298!2.91e-11!8;UBERON:0000483!3.44e-11!309;UBERON:0000119!5.90e-11!312;UBERON:0000200!1.94e-10!6;UBERON:0004111!2.66e-10!241;UBERON:0000369!3.54e-10!4;UBERON:0002435!3.54e-10!4;UBERON:0000204!3.54e-10!4;UBERON:0010082!3.54e-10!4;UBERON:0000477!4.56e-10!286;UBERON:0002420!1.27e-09!9;UBERON:0007245!1.27e-09!9;UBERON:0010009!1.27e-09!9;UBERON:0010011!1.27e-09!9;UBERON:0000454!1.27e-09!9;UBERON:0000475!3.42e-09!365;UBERON:0009663!7.20e-09!7;UBERON:0001872!1.01e-08!5;UBERON:0000988!1.15e-08!3;UBERON:0002240!1.27e-08!3;UBERON:0000064!1.37e-08!219;UBERON:0001896!2.66e-08!3;UBERON:0005290!2.66e-08!3;UBERON:0010096!2.66e-08!3;UBERON:0002021!3.57e-08!5;UBERON:0005383!4.49e-08!3;UBERON:0005382!4.49e-08!3;UBERON:0002771!4.61e-08!3;UBERON:0001871!1.08e-07!7;UBERON:0002680!4.83e-07!9;UBERON:0001895!4.83e-07!9;UBERON:0010092!4.83e-07!9;UBERON:0000007!8.04e-07!2;UBERON:0003296!8.59e-07!4;UBERON:0010133!8.59e-07!4|ontology_enrichment_uberon_v019=UBERON:0000007;7.09e-34;2!UBERON:0003567;7.09e-34;2!UBERON:0003838;7.09e-34;2!UBERON:0003586;7.09e-34;2!UBERON:0005169;7.09e-34;2!UBERON:0002321;7.09e-34;2!UBERON:0005215;7.09e-34;2!UBERON:0002303;7.09e-34;2!UBERON:0002319;7.09e-34;2!UBERON:0003296;1.71e-17;4!UBERON:0010133;1.71e-17;4!UBERON:0003891;1.71e-17;4!UBERON:0001894;2.04e-10;7!UBERON:0000074;2.04e-10;7!UBERON:0001229;2.04e-10;7!UBERON:0002370;1.64e-09;2!UBERON:0005058;1.64e-09;2!UBERON:0009113;1.64e-09;2!UBERON:0004211;1.47e-07;10!UBERON:0009773;1.47e-07;10!UBERON:0001231;1.47e-07;10!UBERON:0004810;1.47e-07;10!UBERON:0002110;6.14e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0003567,8.39e-34,2;UBERON:0003838,8.39e-34,2;UBERON:0003586,8.39e-34,2;UBERON:0005169,8.39e-34,2;UBERON:0002321,8.39e-34,2;UBERON:0005215,8.39e-34,2;UBERON:0002303,8.39e-34,2;UBERON:0002319,8.39e-34,2;UBERON:0000007,9.92e-34,2;UBERON:0003891,1.86e-17,4;UBERON:0003296,2.02e-17,4;UBERON:0010133,2.02e-17,4;UBERON:0010532,2.14e-10,7;UBERON:0000074,2.14e-10,7;UBERON:0001229,2.14e-10,7;UBERON:0001230,2.14e-10,7;UBERON:0003220,2.14e-10,7;UBERON:0005749,2.14e-10,7;UBERON:0004199,2.14e-10,7;UBERON:0004209,2.14e-10,7;UBERON:0004198,2.14e-10,7;UBERON:0001894,2.24e-10,7;UBERON:0006222,2.24e-10,7;UBERON:0005103,3.27e-09,8;UBERON:0000083,3.27e-09,8;UBERON:0009201,3.27e-09,8;UBERON:0006553,3.27e-09,8;UBERON:0003074,3.27e-09,8;UBERON:0003060,3.27e-09,8;UBERON:0000080,2.75e-08,9;UBERON:0002120,2.75e-08,9;UBERON:0004875,2.75e-08,9;UBERON:0005721,2.75e-08,9;UBERON:0005754,2.75e-08,9;UBERON:0007297,2.75e-08,9;UBERON:0004810,1.52e-07,10;UBERON:0002110,6.14e-07,3;UBERON:0006242,6.14e-07,3;UBERON:0004876,6.1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9806 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13564 | |||
|TSSclassifier=S | |||
|UniProt=A6NIR4,Q92563 | |||
|association_with_transcript=-18bp_to_ENST00000373109,NM_001244950,uc001jso.1_5end | |||
|coexpression_cluster_id=C524 | |||
|description=CAGE_peak_13_at_SPOCK2_5end | |||
|id=chr10:73848549..73848564,- | |||
|ontology_enrichment_celltype=CL:0000242!9.22e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000650;7.09e-34;2!CL:1000500;7.09e-34;2!CL:1000618;7.09e-34;2!CL:1001318;7.09e-34;2!CL:0002173;7.09e-34;2!CL:0000669;1.71e-17;4!CL:1000746;2.04e-10;7!CL:1000612;2.04e-10;7!CL:1000415;8.69e-10;2!CL:0000123;1.64e-09;2!CL:0000242;1.64e-09;2!CL:1000507;1.47e-07;10!CL:1000494;1.47e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,8.39e-34,2;CL:1000500,8.39e-34,2;CL:1000618,8.39e-34,2;CL:1001318,8.39e-34,2;CL:0002173,8.39e-34,2;CL:0000669,1.86e-17,4;CL:1000746,2.14e-10,7;CL:1000612,2.14e-10,7;CL:1000415,8.69e-10,2;CL:0000242,1.33e-09,2;CL:1000507,1.52e-07,10;CL:1000494,1.52e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.37e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000007;7.09e-34;2!UBERON:0003567;7.09e-34;2!UBERON:0003838;7.09e-34;2!UBERON:0003586;7.09e-34;2!UBERON:0005169;7.09e-34;2!UBERON:0002321;7.09e-34;2!UBERON:0005215;7.09e-34;2!UBERON:0002303;7.09e-34;2!UBERON:0002319;7.09e-34;2!UBERON:0003296;1.71e-17;4!UBERON:0010133;1.71e-17;4!UBERON:0003891;1.71e-17;4!UBERON:0001894;2.04e-10;7!UBERON:0000074;2.04e-10;7!UBERON:0001229;2.04e-10;7!UBERON:0002370;1.64e-09;2!UBERON:0005058;1.64e-09;2!UBERON:0009113;1.64e-09;2!UBERON:0004211;1.47e-07;10!UBERON:0009773;1.47e-07;10!UBERON:0001231;1.47e-07;10!UBERON:0004810;1.47e-07;10!UBERON:0002110;6.14e-07;3 | |||
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|short_description=p13@SPOCK2 | |||
}} |
Revision as of 14:17, 10 September 2013
Short description: | p13@SPOCK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_SPOCK2_5end |
Coexpression cluster: | C524_serous_endometrioid_endometrial_mesothelioma_gall_clear_papillotubular |
Association with transcript: | -18bp_to_ENST00000373109, NM_001244950, uc001jso.1_5end |
EntrezGene: | SPOCK2 |
HGNC: | 13564 |
UniProt: | A6NIR4Q92563 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 8.39e-34 | 2 |
kidney interstitial cell | 8.39e-34 | 2 |
juxtaglomerular complex cell | 8.39e-34 | 2 |
renal interstitial pericyte | 8.39e-34 | 2 |
extraglomerular mesangial cell | 8.39e-34 | 2 |
pericyte cell | 1.86e-17 | 4 |
glomerular cell | 2.14e-10 | 7 |
kidney corpuscule cell | 2.14e-10 | 7 |
epithelial cell of gall bladder | 8.69e-10 | 2 |
Merkel cell | 1.33e-09 | 2 |
kidney tubule cell | 1.52e-07 | 10 |
nephron tubule epithelial cell | 1.52e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.