FFCP PHASE1:Hg19::chr10:75568374..75568386,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8509|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=7681|TSSclassifier=S|UniProt=|association_with_transcript=-465bp_to_uc010qku.1_5end|coexpression_cluster_id=C12|description=CAGE_peak_7_at_NDST2_5end|id=chr10:75568374..75568386,-|ontology_enrichment_celltype=CL:0002057!4.85e-12!42;CL:0000860!3.03e-11!45;CL:0000766!3.10e-09!76;CL:0000839!1.76e-08!70;CL:0000557!3.34e-08!71;CL:0002194!4.27e-07!63;CL:0000576!4.27e-07!63;CL:0000040!4.27e-07!63;CL:0000559!4.27e-07!63;CL:0000738!9.63e-07!140|ontology_enrichment_celltype_v019=CL:0000097;9.21e-32;5!CL:0000860;1.70e-25;33!CL:0002057;1.70e-25;33!CL:0000473;3.28e-18;39!CL:0000234;3.28e-18;39!CL:0000163;8.79e-18;9!CL:0000766;1.79e-13;69!CL:0000576;1.32e-12;48!CL:0000763;3.02e-08;100|ontology_enrichment_celltype_v019_2=CL:0000097,8.23e-32,5;CL:0002028,8.23e-32,5;CL:0000766,5.95e-27,72;CL:0000839,1.28e-25,66;CL:0000557,3.27e-25,67;CL:0000860,6.35e-21,42;CL:0002057,6.35e-21,42;CL:0000763,8.60e-20,108;CL:0000049,8.60e-20,108;CL:0000473,3.92e-18,48;CL:0000234,3.92e-18,48;CL:0000163,8.26e-18,9;CL:0002194,3.19e-14,59;CL:0000576,3.19e-14,59;CL:0000040,3.19e-14,59;CL:0000559,3.19e-14,59;CL:0002009,1.02e-13,61;CL:0000738,2.99e-13,136;CL:0002031,3.40e-13,120;CL:0002032,1.75e-12,161;CL:0000837,1.75e-12,161;CL:0000037,7.36e-12,168;CL:0000988,3.96e-11,177|ontology_enrichment_development_v019=CL:0002057;5.73e-18;42!UBERON:0006298;9.49e-11;1!UBERON:0005754;9.49e-11;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!7.03e-09!102;UBERON:0003061!7.03e-09!102;UBERON:0002371!3.14e-07!80;UBERON:0002193!3.45e-07!112|ontology_enrichment_uberon_v019=UBERON:0000998;9.49e-11;1!UBERON:0001736;9.49e-11;1!UBERON:0006868;9.49e-11;1|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.20e-22,76;UBERON:0001474,2.92e-20,82;UBERON:0002390,2.65e-19,98;UBERON:0003061,2.65e-19,98;UBERON:0004765,2.76e-18,90;UBERON:0002405,1.25e-17,93;UBERON:0002193,2.59e-17,108;UBERON:0001434,2.97e-16,100;UBERON:0001736,6.77e-11,1;UBERON:0006298,6.77e-11,1;UBERON:0000998,9.97e-11,1;UBERON:0006868,9.97e-11,1;UBERON:0003081,2.04e-09,203;UBERON:0002204,7.31e-09,167|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0.313454721478088,0,0,0.125542639594803,0.305653622991805,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0.32389366601898,0,0.290796477559129,1.51150377475524,0.242584061187816,0.464858073811369,1.23350366406548,0,2.01384674625505,1.2808035326455,0.236482229888585,0,0.645484683583826,0,0.941211697713023,0.272906150057846,0,0.612167784741805,0.641858054152187,0,0.989553900560148,1.19678194572979,0.852449501065388,1.45104619314292,0.56738522469114,1.24564449799115,1.25624332628372,2.08593167368081,0.434377689410233,1.21079900526674,0.368277635987565,0.316462387440884,0,0.212604299965044,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0.205601498999509,0,0,0.473447805734733,0,0.111410456885174,0,0,0,0,0,0,0.552700035571697,0,0.14828656316206,0,0,0,0.383220493601921,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.417989933073621,0,0,0,0.402829317109147,0,0,0,0,0,0.22452937262617,0,0,0,0,1.31780417436063,0,0,0,0,0,0.286836620748814,0,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0.245668634623536,0.206651562351531,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0.612975591598039,0.150238058906597,0,0,0,0.211931901159562,0,0,0.257640540045629,0,0,0,0,0.184099797284599,0.161646056818812,0,0.10075209822764,0,0,0.272746120590835,0,0,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0.441463099414651,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,2.64145302039678,7.87846839054934,4.90007841617669,4.4184851699233,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0.431255149719035,0,0.254094624222463,0,0,0,0.637938751653163,0.749007023947182,0,0.828831026872071,0.24538298343828,0.500170521059677,0,0,0,0.157702415033935,0,0,0,0,0,0,0.260650843404249,0,0,0.413536052245775,0.431428401637234,0.320182673410333,0.303127571446259,0,0,0,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.308419387605311,0.355123450626254,0,0.519254429183621,0.116210378459959,0,0.601519410909855,0.0920809889358963,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8509 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7681 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-465bp_to_uc010qku.1_5end | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_7_at_NDST2_5end | |||
|id=chr10:75568374..75568386,- | |||
|ontology_enrichment_celltype=CL:0002057!4.85e-12!42;CL:0000860!3.03e-11!45;CL:0000766!3.10e-09!76;CL:0000839!1.76e-08!70;CL:0000557!3.34e-08!71;CL:0002194!4.27e-07!63;CL:0000576!4.27e-07!63;CL:0000040!4.27e-07!63;CL:0000559!4.27e-07!63;CL:0000738!9.63e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000097;9.21e-32;5!CL:0000860;1.70e-25;33!CL:0002057;1.70e-25;33!CL:0000473;3.28e-18;39!CL:0000234;3.28e-18;39!CL:0000163;8.79e-18;9!CL:0000766;1.79e-13;69!CL:0000576;1.32e-12;48!CL:0000763;3.02e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,8.23e-32,5;CL:0002028,8.23e-32,5;CL:0000766,5.95e-27,72;CL:0000839,1.28e-25,66;CL:0000557,3.27e-25,67;CL:0000860,6.35e-21,42;CL:0002057,6.35e-21,42;CL:0000763,8.60e-20,108;CL:0000049,8.60e-20,108;CL:0000473,3.92e-18,48;CL:0000234,3.92e-18,48;CL:0000163,8.26e-18,9;CL:0002194,3.19e-14,59;CL:0000576,3.19e-14,59;CL:0000040,3.19e-14,59;CL:0000559,3.19e-14,59;CL:0002009,1.02e-13,61;CL:0000738,2.99e-13,136;CL:0002031,3.40e-13,120;CL:0002032,1.75e-12,161;CL:0000837,1.75e-12,161;CL:0000037,7.36e-12,168;CL:0000988,3.96e-11,177 | |||
|ontology_enrichment_development_v019=CL:0002057;5.73e-18;42!UBERON:0006298;9.49e-11;1!UBERON:0005754;9.49e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.03e-09!102;UBERON:0003061!7.03e-09!102;UBERON:0002371!3.14e-07!80;UBERON:0002193!3.45e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;9.49e-11;1!UBERON:0001736;9.49e-11;1!UBERON:0006868;9.49e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.20e-22,76;UBERON:0001474,2.92e-20,82;UBERON:0002390,2.65e-19,98;UBERON:0003061,2.65e-19,98;UBERON:0004765,2.76e-18,90;UBERON:0002405,1.25e-17,93;UBERON:0002193,2.59e-17,108;UBERON:0001434,2.97e-16,100;UBERON:0001736,6.77e-11,1;UBERON:0006298,6.77e-11,1;UBERON:0000998,9.97e-11,1;UBERON:0006868,9.97e-11,1;UBERON:0003081,2.04e-09,203;UBERON:0002204,7.31e-09,167 | |||
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| |||
|short_description=p7@NDST2 | |||
}} |
Revision as of 14:23, 10 September 2013
Short description: | p7@NDST2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_NDST2_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -465bp_to_uc010qku.1_5end |
EntrezGene: | NDST2 |
HGNC: | 7681 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 8.23e-32 | 5 |
basophil mast progenitor cell | 8.23e-32 | 5 |
myeloid leukocyte | 5.95e-27 | 72 |
myeloid lineage restricted progenitor cell | 1.28e-25 | 66 |
granulocyte monocyte progenitor cell | 3.27e-25 | 67 |
classical monocyte | 6.35e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.35e-21 | 42 |
myeloid cell | 8.60e-20 | 108 |
common myeloid progenitor | 8.60e-20 | 108 |
defensive cell | 3.92e-18 | 48 |
phagocyte | 3.92e-18 | 48 |
endocrine cell | 8.26e-18 | 9 |
monopoietic cell | 3.19e-14 | 59 |
monocyte | 3.19e-14 | 59 |
monoblast | 3.19e-14 | 59 |
promonocyte | 3.19e-14 | 59 |
macrophage dendritic cell progenitor | 1.02e-13 | 61 |
leukocyte | 2.99e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 3.40e-13 | 120 |
hematopoietic oligopotent progenitor cell | 1.75e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.75e-12 | 161 |
hematopoietic stem cell | 7.36e-12 | 168 |
hematopoietic cell | 3.96e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.20e-22 | 76 |
bone element | 2.92e-20 | 82 |
hematopoietic system | 2.65e-19 | 98 |
blood island | 2.65e-19 | 98 |
skeletal element | 2.76e-18 | 90 |
immune system | 1.25e-17 | 93 |
hemolymphoid system | 2.59e-17 | 108 |
skeletal system | 2.97e-16 | 100 |
submandibular gland | 6.77e-11 | 1 |
submandibular gland primordium | 6.77e-11 | 1 |
seminal vesicle | 9.97e-11 | 1 |
seminal fluid secreting gland | 9.97e-11 | 1 |
lateral plate mesoderm | 2.04e-09 | 203 |
musculoskeletal system | 7.31e-09 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.