FFCP PHASE1:Hg19::chr10:88428502..88428513,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11155|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15710|TSSclassifier=S|UniProt=|association_with_transcript=76bp_to_uc001kdt.2,uc009xsz.2_5end|coexpression_cluster_id=C20|description=CAGE_peak_5_at_LDB3_5end|id=chr10:88428502..88428513,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0005062;1.00e-14;4!UBERON:0007284;1.00e-14;4!UBERON:0006603;2.31e-09;65!UBERON:0004874;6.80e-08;1!UBERON:0010227;7.26e-08;1!UBERON:0005425;9.43e-08;1!UBERON:0000358;1.07e-07;1!UBERON:0010226;1.07e-07;1!UBERON:0006298;1.80e-07;1!UBERON:0004140;1.80e-07;1!UBERON:0003104;8.92e-07;31|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;3.74e-14;2!DOID:178;8.28e-08;1!DOID:326;8.28e-08;1!DOID:3978;8.28e-08;1!DOID:3394;8.28e-08;1!DOID:5844;8.28e-08;1!DOID:1287;1.69e-07;4|ontology_enrichment_disease_v019_2=DOID:114,3.74e-14,2;DOID:178,8.28e-08,1;DOID:326,8.28e-08,1;DOID:3978,8.28e-08,1;DOID:3394,8.28e-08,1;DOID:5844,8.28e-08,1;DOID:1287,1.69e-07,4|ontology_enrichment_uberon=UBERON:0007023!2.86e-65!115;UBERON:0001049!2.96e-24!57;UBERON:0005068!2.96e-24!57;UBERON:0006241!2.96e-24!57;UBERON:0007135!2.96e-24!57;UBERON:0001017!1.74e-20!82;UBERON:0005743!2.59e-20!86;UBERON:0003075!1.53e-19!86;UBERON:0007284!1.53e-19!86;UBERON:0000073!7.95e-19!94;UBERON:0001016!7.95e-19!94;UBERON:0002346!3.12e-18!90;UBERON:0000955!5.09e-18!69;UBERON:0006238!5.09e-18!69;UBERON:0002616!5.37e-18!59;UBERON:0003080!1.18e-16!42;UBERON:0002780!2.03e-15!41;UBERON:0001890!2.03e-15!41;UBERON:0006240!2.03e-15!41;UBERON:0002020!5.32e-14!34;UBERON:0003528!5.32e-14!34;UBERON:0001893!7.23e-14!34;UBERON:0004121!8.55e-14!169;UBERON:0000153!3.06e-13!129;UBERON:0007811!3.06e-13!129;UBERON:0000924!3.41e-13!173;UBERON:0006601!3.41e-13!173;UBERON:0002791!7.21e-13!33;UBERON:0000033!2.70e-12!123;UBERON:0001869!1.61e-11!32;UBERON:0002298!8.21e-11!8;UBERON:0003056!1.01e-10!61;UBERON:0002308!1.17e-09!9;UBERON:0000125!1.17e-09!9;UBERON:0004111!2.51e-09!241;UBERON:0003076!6.43e-09!15;UBERON:0003057!6.43e-09!15;UBERON:0000025!8.95e-09!194;UBERON:0002619!1.28e-08!22;UBERON:0000483!2.82e-08!309;UBERON:0000468!3.49e-08!659;UBERON:0001950!4.25e-08!20;UBERON:0000119!4.62e-08!312;UBERON:0000481!1.17e-07!347;UBERON:0004151!1.22e-07!3;UBERON:0003978!1.36e-07!3;UBERON:0009751!1.36e-07!3;UBERON:0000946!1.36e-07!3;UBERON:0002523!1.36e-07!3;UBERON:0005983!1.36e-07!3;UBERON:0002165!1.36e-07!3;UBERON:0002062!1.36e-07!3;UBERON:0007280!1.36e-07!3;UBERON:0003103!2.21e-07!69;UBERON:0000477!2.32e-07!286;UBERON:0000956!2.46e-07!25;UBERON:0000203!2.46e-07!25;UBERON:0000062!2.87e-07!511;UBERON:0000922!4.24e-07!612;UBERON:0002420!4.96e-07!9;UBERON:0007245!4.96e-07!9;UBERON:0010009!4.96e-07!9;UBERON:0010011!4.96e-07!9;UBERON:0000454!4.96e-07!9;UBERON:0000467!5.38e-07!625;UBERON:0006947!5.40e-07!3;UBERON:0004054!5.40e-07!3;UBERON:0000475!5.47e-07!365;UBERON:0002240!5.62e-07!3;UBERON:0000480!5.99e-07!626|ontology_enrichment_uberon_v019=UBERON:0007100;1.83e-23;25!UBERON:0004151;1.29e-19;3!UBERON:0003978;1.94e-19;3!UBERON:0000946;1.94e-19;3!UBERON:0005090;2.15e-14;2!UBERON:0001630;2.15e-14;2!UBERON:0000341;4.54e-14;2!UBERON:0002081;1.19e-13;2!UBERON:0002133;2.17e-13;2!UBERON:0000948;4.29e-13;22!UBERON:0001723;8.56e-10;3!UBERON:0001033;8.56e-10;3!UBERON:0001389;4.28e-08;1!UBERON:0000026;4.28e-08;1!UBERON:0008784;4.28e-08;1!UBERON:0006058;4.28e-08;1!UBERON:0003663;4.28e-08;1!UBERON:0004256;4.28e-08;1!UBERON:0004708;4.28e-08;1!UBERON:0002101;4.28e-08;1!UBERON:0004709;4.28e-08;1!UBERON:0002529;4.28e-08;1!UBERON:0010538;4.28e-08;1!UBERON:0003661;4.28e-08;1!UBERON:0010890;4.28e-08;1!UBERON:0002471;4.28e-08;1!UBERON:0001383;4.28e-08;1!UBERON:0010758;4.28e-08;1!UBERON:0010707;4.28e-08;1!UBERON:0000978;4.28e-08;1!UBERON:0002103;4.28e-08;1!UBERON:0001665;4.28e-08;1!UBERON:0003823;4.28e-08;1!UBERON:0000154;4.28e-08;1!UBERON:0010709;4.28e-08;1!UBERON:0002426;5.40e-08;1!UBERON:0003831;5.40e-08;1!UBERON:0003898;5.40e-08;1!UBERON:0004830;5.40e-08;1!UBERON:0003830;5.40e-08;1!UBERON:0005175;5.40e-08;1!UBERON:0001774;5.40e-08;1!UBERON:0001103;5.40e-08;1!UBERON:0000989;6.80e-08;1!UBERON:0008811;6.80e-08;1!UBERON:0002079;7.26e-08;1!UBERON:0002146;8.84e-08;1!UBERON:0005623;8.84e-08;1!UBERON:0000941;9.43e-08;1!UBERON:0001785;9.43e-08;1!UBERON:0002464;9.43e-08;1!UBERON:0004904;9.43e-08;1!UBERON:0001021;9.43e-08;1!UBERON:0002084;1.07e-07;1!UBERON:0002082;1.07e-07;1!UBERON:0007029;1.35e-07;1!UBERON:0002135;1.35e-07;1!UBERON:0001736;1.80e-07;1!UBERON:0002134;1.80e-07;1!UBERON:0005208;1.80e-07;1!UBERON:0004145;1.80e-07;1!UBERON:0005946;1.80e-07;1!UBERON:0005965;1.80e-07;1!UBERON:0002078;1.80e-07;1!UBERON:0001301;2.62e-07;1!UBERON:0001134;9.46e-07;16!UBERON:0002036;9.46e-07;16|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.52e-21,27;UBERON:0004151,1.56e-19,3;UBERON:0003978,2.14e-19,3;UBERON:0009751,2.14e-19,3;UBERON:0000946,2.14e-19,3;UBERON:0002523,2.14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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11155 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15710 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=76bp_to_uc001kdt.2,uc009xsz.2_5end | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_5_at_LDB3_5end | |||
|id=chr10:88428502..88428513,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.00e-14;4!UBERON:0007284;1.00e-14;4!UBERON:0006603;2.31e-09;65!UBERON:0004874;6.80e-08;1!UBERON:0010227;7.26e-08;1!UBERON:0005425;9.43e-08;1!UBERON:0000358;1.07e-07;1!UBERON:0010226;1.07e-07;1!UBERON:0006298;1.80e-07;1!UBERON:0004140;1.80e-07;1!UBERON:0003104;8.92e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;3.74e-14;2!DOID:178;8.28e-08;1!DOID:326;8.28e-08;1!DOID:3978;8.28e-08;1!DOID:3394;8.28e-08;1!DOID:5844;8.28e-08;1!DOID:1287;1.69e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.74e-14,2;DOID:178,8.28e-08,1;DOID:326,8.28e-08,1;DOID:3978,8.28e-08,1;DOID:3394,8.28e-08,1;DOID:5844,8.28e-08,1;DOID:1287,1.69e-07,4 | |||
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|short_description=p5@LDB3 | |||
}} |
Revision as of 14:46, 10 September 2013
Short description: | p5@LDB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_LDB3_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 76bp_to_uc001kdt.2, uc009xsz.2_5end |
EntrezGene: | LDB3 |
HGNC: | 15710 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 3.74e-14 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.