FFCP PHASE1:Hg19::chr11:130014534..130014545,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C3116|description=CAGE_peak_at_chr11:130014534..130014545,+|id=chr11:130014534..130014545,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000860;1.51e-08;33!CL:0002057;1.51e-08;33!CL:0000473;2.09e-08;39!CL:0000234;2.09e-08;39|ontology_enrichment_celltype_v019_2=CL:0000473,2.55e-09,48;CL:0000234,2.55e-09,48;CL:0000860,2.45e-08,42;CL:0002057,2.45e-08,42;CL:0002194,4.30e-07,59;CL:0000576,4.30e-07,59;CL:0000040,4.30e-07,59;CL:0000559,4.30e-07,59|ontology_enrichment_development_v019=CL:0002057;2.35e-07;42|ontology_enrichment_disease=DOID:0050687!7.46e-07!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.16e-09!57;UBERON:0005068!2.16e-09!57;UBERON:0006241!2.16e-09!57;UBERON:0007135!2.16e-09!57;UBERON:0000062!8.53e-09!511;UBERON:0007023!1.89e-08!115;UBERON:0000922!7.74e-08!612;UBERON:0002616!8.23e-08!59;UBERON:0000468!1.62e-07!659;UBERON:0002780!4.97e-07!41;UBERON:0001890!4.97e-07!41;UBERON:0006240!4.97e-07!41;UBERON:0000467!5.18e-07!625;UBERON:0002050!7.36e-07!605;UBERON:0005423!7.36e-07!605;UBERON:0000480!7.48e-07!626;UBERON:0001017!9.86e-07!82|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.58e-13,56;UBERON:0005068,3.58e-13,56;UBERON:0006241,3.58e-13,56;UBERON:0007135,3.58e-13,56;UBERON:0000073,6.14e-11,53;UBERON:0002616,6.14e-11,53;UBERON:0003075,4.00e-10,82;UBERON:0007284,4.00e-10,82;UBERON:0001017,1.31e-09,81;UBERON:0002346,3.08e-09,86;UBERON:0007023,1.08e-08,114;UBERON:0001016,1.83e-08,89;UBERON:0000955,1.19e-07,68;UBERON:0006238,1.19e-07,68;UBERON:0002780,1.19e-07,41;UBERON:0001890,1.19e-07,41;UBERON:0003080,1.19e-07,41;UBERON:0006240,1.19e-07,41;UBERON:0010314,1.35e-07,132;UBERON:0003076,1.39e-07,15;UBERON:0003057,1.39e-07,15;UBERON:0003528,1.91e-07,34;UBERON:0002020,1.91e-07,34;UBERON:0000025,4.20e-07,192|phase1_expression=0.181678379270557,0.856402095563933,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0.495065411840187,0,0,1.20538905604795,0.730310090387373,2.43966399395253,0,0,0.626909442956176,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60435557976113,8.46342395791822,0.223915474239924,0.32389366601898,0.515151135268373,2.76256653681173,1.13362783106643,0.970336244751265,3.25400651667958,3.28934310417461,0.309706370895104,3.45230870786581,2.56160706529101,0,1.37898272294647,0,0,1.88242339542605,0.818718450173537,0.449446968890169,0.918251677112708,0,1.91801137739712,1.64925650093358,2.59302754908121,1.27867425159808,1.16083695451434,2.8369261234557,2.4912889959823,2.51248665256743,1.0429658368404,0.217188844705117,1.81619850790011,0.368277635987565,0.316462387440884,0,0.212604299965044,0,0.22465726229299,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0.552700035571697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,2.43806866313962,0.670700859703636,0,0,0,1.44846518960824,0,0,0.567208902984407,0,0.351339142772504,0.261958150995425,0,0.370784442784429,0,0.696518949197069,0.797747763113191,0.238490624305342,0,0,0.198762407366705,0,0.347140501607594,0,3.77549492588915,0,0.626984899610432,0.258416759169329,0,0,0.805658634218294,0.760272105718513,1.22031028774085,0,0.81014194788176,0.17859945656816,0.44905874525234,1.23872628531654,1.53316637465883,0,1.09921046358244,0,0,0,2.48485975847659,0.379891534993739,0.397227542439656,0.286836620748814,2.12801029319014,0,0,0.24666754841716,0.311211035399766,0,0.326923806226917,0.151357427644931,0.576175924479999,0,0.936480230490962,0,0.896692083310806,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.122834317311768,0.103325781175765,3.56400857184616,0.741800787835671,0,0,0,0.125118519871964,0,1.31693286264251,0.612975591598039,2.10333282469236,0.567160915800105,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0.515281080091258,0,1.35021065793013,0.0974370051611986,0,0.552299391853796,0,0,0,0,0.193260853163297,0,0.286804595389004,0.609868530647977,0.530119073285941,0.464775771478074,0.207322110030741,0.252320850875628,0.72995471815166,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0.118306800039844,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0.404493924480493,0.588664395376038,0,0,0,0.4115740113314,0,5.07020139287323,0,2.95394953340702,0.441463099414651,0.614942192715568,1.02940686179115,0.109750285408626,0,0.804231779293047,0.648119116109707,0,0,0,0,0.234817388471643,0,1.38895653772983,1.71228737011138,0,0,0.984868024349589,0.468008530278475,1.18904929830983,0,0,0,0.268675568108545,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0.063497894292169,0,0,1.71072446022705,0.102827492703324,0,0.571652865261156,0,0,0,0.775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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3116 | |||
|description=CAGE_peak_at_chr11:130014534..130014545,+ | |||
|id=chr11:130014534..130014545,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.51e-08;33!CL:0002057;1.51e-08;33!CL:0000473;2.09e-08;39!CL:0000234;2.09e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.55e-09,48;CL:0000234,2.55e-09,48;CL:0000860,2.45e-08,42;CL:0002057,2.45e-08,42;CL:0002194,4.30e-07,59;CL:0000576,4.30e-07,59;CL:0000040,4.30e-07,59;CL:0000559,4.30e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;2.35e-07;42 | |||
|ontology_enrichment_disease=DOID:0050687!7.46e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.16e-09!57;UBERON:0005068!2.16e-09!57;UBERON:0006241!2.16e-09!57;UBERON:0007135!2.16e-09!57;UBERON:0000062!8.53e-09!511;UBERON:0007023!1.89e-08!115;UBERON:0000922!7.74e-08!612;UBERON:0002616!8.23e-08!59;UBERON:0000468!1.62e-07!659;UBERON:0002780!4.97e-07!41;UBERON:0001890!4.97e-07!41;UBERON:0006240!4.97e-07!41;UBERON:0000467!5.18e-07!625;UBERON:0002050!7.36e-07!605;UBERON:0005423!7.36e-07!605;UBERON:0000480!7.48e-07!626;UBERON:0001017!9.86e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.58e-13,56;UBERON:0005068,3.58e-13,56;UBERON:0006241,3.58e-13,56;UBERON:0007135,3.58e-13,56;UBERON:0000073,6.14e-11,53;UBERON:0002616,6.14e-11,53;UBERON:0003075,4.00e-10,82;UBERON:0007284,4.00e-10,82;UBERON:0001017,1.31e-09,81;UBERON:0002346,3.08e-09,86;UBERON:0007023,1.08e-08,114;UBERON:0001016,1.83e-08,89;UBERON:0000955,1.19e-07,68;UBERON:0006238,1.19e-07,68;UBERON:0002780,1.19e-07,41;UBERON:0001890,1.19e-07,41;UBERON:0003080,1.19e-07,41;UBERON:0006240,1.19e-07,41;UBERON:0010314,1.35e-07,132;UBERON:0003076,1.39e-07,15;UBERON:0003057,1.39e-07,15;UBERON:0003528,1.91e-07,34;UBERON:0002020,1.91e-07,34;UBERON:0000025,4.20e-07,192 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0.495065411840187,0,0,1.20538905604795,0.730310090387373,2.43966399395253,0,0,0.626909442956176,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60435557976113,8.46342395791822,0.223915474239924,0.32389366601898,0.515151135268373,2.76256653681173,1.13362783106643,0.970336244751265,3.25400651667958,3.28934310417461,0.309706370895104,3.45230870786581,2.56160706529101,0,1.37898272294647,0,0,1.88242339542605,0.818718450173537,0.449446968890169,0.918251677112708,0,1.91801137739712,1.64925650093358,2.59302754908121,1.27867425159808,1.16083695451434,2.8369261234557,2.4912889959823,2.51248665256743,1.0429658368404,0.217188844705117,1.81619850790011,0.368277635987565,0.316462387440884,0,0.212604299965044,0,0.22465726229299,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0.552700035571697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,2.43806866313962,0.670700859703636,0,0,0,1.44846518960824,0,0,0.567208902984407,0,0.351339142772504,0.261958150995425,0,0.370784442784429,0,0.696518949197069,0.797747763113191,0.238490624305342,0,0,0.198762407366705,0,0.347140501607594,0,3.77549492588915,0,0.626984899610432,0.258416759169329,0,0,0.805658634218294,0.760272105718513,1.22031028774085,0,0.81014194788176,0.17859945656816,0.44905874525234,1.23872628531654,1.53316637465883,0,1.09921046358244,0,0,0,2.48485975847659,0.379891534993739,0.397227542439656,0.286836620748814,2.12801029319014,0,0,0.24666754841716,0.311211035399766,0,0.326923806226917,0.151357427644931,0.576175924479999,0,0.936480230490962,0,0.896692083310806,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.122834317311768,0.103325781175765,3.56400857184616,0.741800787835671,0,0,0,0.125118519871964,0,1.31693286264251,0.612975591598039,2.10333282469236,0.567160915800105,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0.515281080091258,0,1.35021065793013,0.0974370051611986,0,0.552299391853796,0,0,0,0,0.193260853163297,0,0.286804595389004,0.609868530647977,0.530119073285941,0.464775771478074,0.207322110030741,0.252320850875628,0.72995471815166,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0.118306800039844,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0.404493924480493,0.588664395376038,0,0,0,0.4115740113314,0,5.07020139287323,0,2.95394953340702,0.441463099414651,0.614942192715568,1.02940686179115,0.109750285408626,0,0.804231779293047,0.648119116109707,0,0,0,0,0.234817388471643,0,1.38895653772983,1.71228737011138,0,0,0.984868024349589,0.468008530278475,1.18904929830983,0,0,0,0.268675568108545,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0.063497894292169,0,0,1.71072446022705,0.102827492703324,0,0.571652865261156,0,0,0,0.775630294546667,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,4.29883862082845,1.2162378064119,0.502257091432126,4.21667878966063,0,0,4.27910715122155,0,0.410952645100767,0.179060963239896,0,0.591092280605782,0.215627574859517,0.513372145118994,0,0,0,0,1.27587750330633,0,0,0,0.736148950314839,1.50051156317903,0,1.66376689224646,1.96271887676878,0.630809660135739,0.819989904948992,0,0,0,0,0,0.695068915744663,0,0,0,0.647142602455851,0,0,0,0,0,0.153461973288062,0.561320188866147,0,0,0.64341568457443,0,0,0.177561725313127,0.164254312027618,0,0.116210378459959,0.483437798366489,0.40101294060657,0.276242966807689,0.114814448164607,0.182091168006717,0.524497659837696,0,0.0770153371044148,0,0,0.105551628892876,0,0.510281115829547,0.647747748306418,0,0,0,0,0.831076008928724,0.447749509444357,0,0.261435451024901,0,0,0,0.412164046590889,0,0,0,0,1.6068392984416,0.193341436584244,0,0,0,0.214840489736547,0,0.340906509664404,0.0890320356467374,0.330569830721956,2.11409074101617,0.893288987462089,1.92199783625545,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0.235624804691373,0.202182481573316,0,0,0,1.46228093778771,0,0,0.141405431953713,0,0,0.66343897524122,0,0,0.655894752046633,0.202910376962704,0.30982349809975,0.281695602532241,0,0.196498082026242,0,0,1.26664581178598,0,0,0,0.384888450902048,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,3.43056302373444,0.185803175125719,0,0,0.159426272728822,0,0,0.211673582723883,0.973865820823666,0.280797178113459,0,0,5.01268954180134,0.169291777801603,0.1605880751037,0.201799707191048,0.851692475380653,0.687010689511529,0,0,0.166849141711909,0.19538809540204,0,1.23087398947712,1.08182271390393,0,0,1.12284324244932,0.146508179271894,1.09224469574562,0,1.98895302764489,0.47748896947538,0,0.307160702099232,1.9882952955326,2.11004124615769,0.222617410045812,0.659215496907038,0.844501632511974,2.19172787076177,0.276283915531148,0.251932747854276,0.102268682502155,0,0.622079175323615,0.359473404589307,0.537063524026827,2.04628948090749,0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0.320568492303233 | |||
|short_description=p@chr11:130014534..130014545,+ | |||
}} |
Revision as of 16:40, 10 September 2013
Short description: | p@chr11:130014534..130014545, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:130014534..130014545, + |
Coexpression cluster: | C3116_pineal_Monocytederived_thyroid_colon_Cardiac_large_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.55e-09 | 48 |
phagocyte | 2.55e-09 | 48 |
classical monocyte | 2.45e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.45e-08 | 42 |
monopoietic cell | 4.30e-07 | 59 |
monocyte | 4.30e-07 | 59 |
monoblast | 4.30e-07 | 59 |
promonocyte | 4.30e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
neural tube | 3.58e-13 | 56 |
neural rod | 3.58e-13 | 56 |
future spinal cord | 3.58e-13 | 56 |
neural keel | 3.58e-13 | 56 |
regional part of nervous system | 6.14e-11 | 53 |
regional part of brain | 6.14e-11 | 53 |
neural plate | 4.00e-10 | 82 |
presumptive neural plate | 4.00e-10 | 82 |
central nervous system | 1.31e-09 | 81 |
neurectoderm | 3.08e-09 | 86 |
adult organism | 1.08e-08 | 114 |
nervous system | 1.83e-08 | 89 |
brain | 1.19e-07 | 68 |
future brain | 1.19e-07 | 68 |
regional part of forebrain | 1.19e-07 | 41 |
forebrain | 1.19e-07 | 41 |
anterior neural tube | 1.19e-07 | 41 |
future forebrain | 1.19e-07 | 41 |
structure with developmental contribution from neural crest | 1.35e-07 | 132 |
posterior neural tube | 1.39e-07 | 15 |
chordal neural plate | 1.39e-07 | 15 |
brain grey matter | 1.91e-07 | 34 |
gray matter | 1.91e-07 | 34 |
tube | 4.20e-07 | 192 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.