FFCP PHASE1:Hg19::chr11:1861626..1861651,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7136|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11946|TSSclassifier=S|UniProt=|association_with_transcript=178bp_to_ENST00000468473_5end|coexpression_cluster_id=C31|description=CAGE_peak_6_at_TNNI2_5end|id=chr11:1861626..1861651,+|ontology_enrichment_celltype=CL:0000766!1.87e-10!76;CL:0000763!1.38e-09!112;CL:0000049!1.38e-09!112;CL:0000738!1.73e-08!140;CL:0000094!1.05e-07!8;CL:0000988!1.77e-07!182;CL:0000037!2.02e-07!172;CL:0000566!2.02e-07!172|ontology_enrichment_celltype_v019=CL:0000775;2.53e-18;3!CL:0000094;3.11e-15;8!CL:0000081;3.00e-11;11!CL:0000771;8.60e-08;2|ontology_enrichment_celltype_v019_2=CL:0000775,2.32e-18,3;CL:0000094,3.11e-15,8;CL:0000081,3.00e-11,11;CL:0000771,9.19e-08,2|ontology_enrichment_development_v019=UBERON:0004874;8.17e-15;1!UBERON:0008814;3.56e-08;2!UBERON:0010056;3.56e-08;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001630!5.63e-09!2;UBERON:0005090!5.63e-09!2;UBERON:0000341!6.81e-09!2|ontology_enrichment_uberon_v019=UBERON:0005090;8.13e-28;2!UBERON:0001630;8.13e-28;2!UBERON:0000341;1.60e-27;2!UBERON:0001723;3.86e-19;3!UBERON:0001033;3.86e-19;3!UBERON:0002426;7.13e-15;1!UBERON:0003831;7.13e-15;1!UBERON:0003898;7.13e-15;1!UBERON:0004830;7.13e-15;1!UBERON:0003830;7.13e-15;1!UBERON:0005175;7.13e-15;1!UBERON:0001774;7.13e-15;1!UBERON:0001103;7.13e-15;1!UBERON:0000989;8.17e-15;1!UBERON:0008811;8.17e-15;1!UBERON:0001389;9.36e-15;1!UBERON:0000026;9.36e-15;1!UBERON:0008784;9.36e-15;1!UBERON:0006058;9.36e-15;1!UBERON:0003663;9.36e-15;1!UBERON:0004256;9.36e-15;1!UBERON:0004708;9.36e-15;1!UBERON:0002101;9.36e-15;1!UBERON:0004709;9.36e-15;1!UBERON:0002529;9.36e-15;1!UBERON:0010538;9.36e-15;1!UBERON:0003661;9.36e-15;1!UBERON:0010890;9.36e-15;1!UBERON:0002471;9.36e-15;1!UBERON:0001383;9.36e-15;1!UBERON:0010758;9.36e-15;1!UBERON:0010707;9.36e-15;1!UBERON:0000978;9.36e-15;1!UBERON:0002103;9.36e-15;1!UBERON:0001665;9.36e-15;1!UBERON:0003823;9.36e-15;1!UBERON:0000154;9.36e-15;1!UBERON:0010709;9.36e-15;1!UBERON:0001134;1.01e-13;16!UBERON:0002036;1.01e-13;16!UBERON:0000974;7.76e-10;6!UBERON:0003127;8.60e-08;2!UBERON:0002385;2.00e-07;31!UBERON:0001015;2.00e-07;31!UBERON:0000383;2.00e-07;31|ontology_enrichment_uberon_v019_2=UBERON:0005090,8.13e-28,2;UBERON:0001630,8.13e-28,2;UBERON:0000341,1.60e-27,2;UBERON:0001723,3.86e-19,3;UBERON:0001033,3.86e-19,3;UBERON:0010056,3.86e-19,3;UBERON:0002426,7.13e-15,1;UBERON:0003831,7.13e-15,1;UBERON:0003898,7.13e-15,1;UBERON:0004830,7.13e-15,1;UBERON:0003830,7.13e-15,1;UBERON:0005175,7.13e-15,1;UBERON:0001774,7.13e-15,1;UBERON:0001103,7.13e-15,1;UBERON:0010084,7.13e-15,1;UBERON:0000989,8.17e-15,1;UBERON:0008811,8.17e-15,1;UBERON:0006258,8.17e-15,1;UBERON:0005876,8.17e-15,1;UBERON:0004874,8.17e-15,1;UBERON:0005418,9.36e-15,1;UBERON:0001389,9.36e-15,1;UBERON:0000026,9.36e-15,1;UBERON:0008784,9.36e-15,1;UBERON:0006058,9.36e-15,1;UBERON:0003663,9.36e-15,1;UBERON:0004256,9.36e-15,1;UBERON:0004708,9.36e-15,1;UBERON:0002101,9.36e-15,1;UBERON:0004709,9.36e-15,1;UBERON:0002529,9.36e-15,1;UBERON:0010538,9.36e-15,1;UBERON:0003661,9.36e-15,1;UBERON:0010890,9.36e-15,1;UBERON:0002471,9.36e-15,1;UBERON:0001383,9.36e-15,1;UBERON:0004357,9.36e-15,1;UBERON:0004347,9.36e-15,1;UBERON:0005420,9.36e-15,1;UBERON:0005732,9.36e-15,1;UBERON:0010758,9.36e-15,1;UBERON:0010707,9.36e-15,1;UBERON:0000978,9.36e-15,1;UBERON:0002103,9.36e-15,1;UBERON:0001665,9.36e-15,1;UBERON:0003823,9.36e-15,1;UBERON:0000154,9.36e-15,1;UBERON:0010709,9.36e-15,1;UBERON:0005733,9.36e-15,1;UBERON:0005730,9.36e-15,1;UBERON:0003127,8.04e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0,0,0.309706370895104,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0.212604299965044,0.209658645508376,0.112328631146495,0,0,0,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99602809578873,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7136 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11946 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=178bp_to_ENST00000468473_5end | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_6_at_TNNI2_5end | |||
|id=chr11:1861626..1861651,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.87e-10!76;CL:0000763!1.38e-09!112;CL:0000049!1.38e-09!112;CL:0000738!1.73e-08!140;CL:0000094!1.05e-07!8;CL:0000988!1.77e-07!182;CL:0000037!2.02e-07!172;CL:0000566!2.02e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000775;2.53e-18;3!CL:0000094;3.11e-15;8!CL:0000081;3.00e-11;11!CL:0000771;8.60e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,2.32e-18,3;CL:0000094,3.11e-15,8;CL:0000081,3.00e-11,11;CL:0000771,9.19e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0004874;8.17e-15;1!UBERON:0008814;3.56e-08;2!UBERON:0010056;3.56e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001630!5.63e-09!2;UBERON:0005090!5.63e-09!2;UBERON:0000341!6.81e-09!2 | |||
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|short_description=p6@TNNI2 | |||
}} |
Revision as of 17:02, 10 September 2013
Short description: | p6@TNNI2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_TNNI2_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 178bp_to_ENST00000468473_5end |
EntrezGene: | TNNI2 |
HGNC: | 11946 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 2.32e-18 | 3 |
granulocyte | 3.11e-15 | 8 |
blood cell | 3.00e-11 | 11 |
eosinophil | 9.19e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.