FFCP PHASE1:Hg19::chr12:103310959..103310974,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5053|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8582|TSSclassifier=S|UniProt=|association_with_transcript=22bp_to_ENST00000551988_5end|coexpression_cluster_id=C5|description=CAGE_peak_2_at_PAH_5end|id=chr12:103310959..103310974,-|ontology_enrichment_celltype=CL:0000181!7.88e-19!12;CL:0000417!7.88e-19!12;CL:0000668!7.88e-19!12;CL:0000414!7.88e-19!12;CL:0000412!7.88e-19!12;CL:0000182!7.88e-19!12;CL:0000223!2.58e-07!59|ontology_enrichment_celltype_v019=CL:0000182;6.24e-37;12|ontology_enrichment_celltype_v019_2=CL:0000182,6.24e-37,12;CL:0000223,3.98e-09,58|ontology_enrichment_development_v019=UBERON:0004161;4.00e-40;11!UBERON:0009497;7.28e-34;13!UBERON:0003104;2.00e-22;31!UBERON:0001041;1.24e-10;30!UBERON:0006242;1.81e-10;1|ontology_enrichment_disease=DOID:114!4.42e-10!2|ontology_enrichment_disease_v019=DOID:0050619;3.29e-10;1!DOID:1357;3.29e-10;1!DOID:178;4.33e-10;1!DOID:326;4.33e-10;1!DOID:3978;4.33e-10;1!DOID:3394;4.33e-10;1!DOID:5844;4.33e-10;1|ontology_enrichment_disease_v019_2=DOID:0050619,3.61e-10,1;DOID:1357,3.61e-10,1;DOID:178,4.75e-10,1;DOID:326,4.75e-10,1;DOID:3978,4.75e-10,1;DOID:3394,4.75e-10,1;DOID:5844,4.75e-10,1|ontology_enrichment_uberon=UBERON:0005057!1.80e-23!26;UBERON:0002107!5.06e-19!19;UBERON:0006925!5.06e-19!19;UBERON:0008836!5.06e-19!19;UBERON:0003929!3.59e-18!54;UBERON:0009497!2.30e-17!25;UBERON:0000015!2.30e-17!25;UBERON:0002423!2.30e-17!25;UBERON:0006235!2.30e-17!25;UBERON:0004161!2.30e-17!25;UBERON:0002368!1.07e-16!35;UBERON:0008835!3.40e-16!22;UBERON:0003894!3.40e-16!22;UBERON:0009854!2.04e-15!23;UBERON:0000949!1.19e-14!45;UBERON:0007499!4.77e-14!25;UBERON:0009856!1.93e-13!26;UBERON:0002530!3.38e-12!59;UBERON:0005172!8.90e-12!55;UBERON:0005173!8.90e-12!55;UBERON:0002365!5.31e-11!31;UBERON:0002330!5.31e-11!31;UBERON:0005911!1.01e-10!82;UBERON:0002417!2.43e-10!61;UBERON:0000916!2.43e-10!61;UBERON:0004921!2.30e-09!129;UBERON:0004185!2.30e-09!129;UBERON:0001007!4.97e-08!155;UBERON:0001555!4.97e-08!155;UBERON:0007026!4.97e-08!155;UBERON:0005177!1.47e-07!107;UBERON:0000077!2.92e-07!130;UBERON:0007023!3.28e-07!115;UBERON:0004119!5.36e-07!169;UBERON:0000925!5.36e-07!169;UBERON:0006595!5.36e-07!169|ontology_enrichment_uberon_v019=UBERON:0002107;4.00e-38;19!UBERON:0006925;4.00e-38;19!UBERON:0002423;2.23e-35;25!UBERON:0002365;3.13e-22;31!UBERON:0002330;3.13e-22;31!UBERON:0002368;1.70e-19;33!UBERON:0005172;2.89e-14;52!UBERON:0005173;2.89e-14;52!UBERON:0000949;5.56e-14;43!UBERON:0002417;2.73e-12;58!UBERON:0000916;2.73e-12;58!UBERON:0001764;3.29e-10;1!UBERON:0001825;3.29e-10;1!UBERON:0002108;5.61e-08;4!UBERON:0001007;9.57e-08;81!UBERON:0002530;4.81e-07;57|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.00e-38,19;UBERON:0006925,4.00e-38,19;UBERON:0008836,4.00e-38,19;UBERON:0009497,2.19e-35,25;UBERON:0000015,2.19e-35,25;UBERON:0002423,2.19e-35,25;UBERON:0006235,2.19e-35,25;UBERON:0004161,2.19e-35,25;UBERON:0008835,9.06e-33,22;UBERON:0003894,9.06e-33,22;UBERON:0009854,2.70e-31,23;UBERON:0007499,1.07e-28,25;UBERON:0009856,1.51e-27,26;UBERON:0002365,6.51e-23,31;UBERON:0002330,6.51e-23,31;UBERON:0005172,1.48e-22,54;UBERON:0005173,1.48e-22,54;UBERON:0002368,3.73e-20,35;UBERON:0002417,4.13e-20,60;UBERON:0000916,4.13e-20,60;UBERON:0003929,7.37e-19,54;UBERON:0000949,2.12e-15,45;UBERON:0005911,7.89e-12,82;UBERON:0002530,1.91e-11,59;UBERON:0005177,3.71e-11,101;UBERON:0001764,3.61e-10,1;UBERON:0001825,3.61e-10,1;UBERON:0009569,7.22e-10,112;UBERON:0004921,4.22e-09,118;UBERON:0001007,2.04e-08,145;UBERON:0001555,2.04e-08,145;UBERON:0007026,2.04e-08,145;UBERON:0002108,5.41e-08,4;UBERON:0004119,1.98e-07,160;UBERON:0000925,1.98e-07,160;UBERON:0006595,1.98e-07,160;UBERON:0001041,2.39e-07,87|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.7020744677662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,505.752588939105,73.712041250822,239.86070211265,0,1.59884970106048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,287.587463508793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,285.349860154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.78532922266653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.9623423108552,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,1.19807400299395,0.858452096273142,0,0,0,17.4743924291181,68.1474526957485,68.4875783147493,72.5936167309571,0,0,0,0,0,0,0,0,0,0,0,14.4214444357533,21.7686540760242,0,0,0,0,0,0,0,0,0,0,0,0,0,256.466408936644,238.512400041998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66991963625398,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84127428655144,2.82190377816914,0,0,0,0,0.8453114551668,0,0,0.773494655682926,0,0,0,0,0,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0.248298857183432,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@PAH}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5053 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8582 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=22bp_to_ENST00000551988_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_PAH_5end | |||
|id=chr12:103310959..103310974,- | |||
|ontology_enrichment_celltype=CL:0000181!7.88e-19!12;CL:0000417!7.88e-19!12;CL:0000668!7.88e-19!12;CL:0000414!7.88e-19!12;CL:0000412!7.88e-19!12;CL:0000182!7.88e-19!12;CL:0000223!2.58e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;6.24e-37;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.24e-37,12;CL:0000223,3.98e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.00e-40;11!UBERON:0009497;7.28e-34;13!UBERON:0003104;2.00e-22;31!UBERON:0001041;1.24e-10;30!UBERON:0006242;1.81e-10;1 | |||
|ontology_enrichment_disease=DOID:114!4.42e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:0050619;3.29e-10;1!DOID:1357;3.29e-10;1!DOID:178;4.33e-10;1!DOID:326;4.33e-10;1!DOID:3978;4.33e-10;1!DOID:3394;4.33e-10;1!DOID:5844;4.33e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,3.61e-10,1;DOID:1357,3.61e-10,1;DOID:178,4.75e-10,1;DOID:326,4.75e-10,1;DOID:3978,4.75e-10,1;DOID:3394,4.75e-10,1;DOID:5844,4.75e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0005057!1.80e-23!26;UBERON:0002107!5.06e-19!19;UBERON:0006925!5.06e-19!19;UBERON:0008836!5.06e-19!19;UBERON:0003929!3.59e-18!54;UBERON:0009497!2.30e-17!25;UBERON:0000015!2.30e-17!25;UBERON:0002423!2.30e-17!25;UBERON:0006235!2.30e-17!25;UBERON:0004161!2.30e-17!25;UBERON:0002368!1.07e-16!35;UBERON:0008835!3.40e-16!22;UBERON:0003894!3.40e-16!22;UBERON:0009854!2.04e-15!23;UBERON:0000949!1.19e-14!45;UBERON:0007499!4.77e-14!25;UBERON:0009856!1.93e-13!26;UBERON:0002530!3.38e-12!59;UBERON:0005172!8.90e-12!55;UBERON:0005173!8.90e-12!55;UBERON:0002365!5.31e-11!31;UBERON:0002330!5.31e-11!31;UBERON:0005911!1.01e-10!82;UBERON:0002417!2.43e-10!61;UBERON:0000916!2.43e-10!61;UBERON:0004921!2.30e-09!129;UBERON:0004185!2.30e-09!129;UBERON:0001007!4.97e-08!155;UBERON:0001555!4.97e-08!155;UBERON:0007026!4.97e-08!155;UBERON:0005177!1.47e-07!107;UBERON:0000077!2.92e-07!130;UBERON:0007023!3.28e-07!115;UBERON:0004119!5.36e-07!169;UBERON:0000925!5.36e-07!169;UBERON:0006595!5.36e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.00e-38;19!UBERON:0006925;4.00e-38;19!UBERON:0002423;2.23e-35;25!UBERON:0002365;3.13e-22;31!UBERON:0002330;3.13e-22;31!UBERON:0002368;1.70e-19;33!UBERON:0005172;2.89e-14;52!UBERON:0005173;2.89e-14;52!UBERON:0000949;5.56e-14;43!UBERON:0002417;2.73e-12;58!UBERON:0000916;2.73e-12;58!UBERON:0001764;3.29e-10;1!UBERON:0001825;3.29e-10;1!UBERON:0002108;5.61e-08;4!UBERON:0001007;9.57e-08;81!UBERON:0002530;4.81e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.00e-38,19;UBERON:0006925,4.00e-38,19;UBERON:0008836,4.00e-38,19;UBERON:0009497,2.19e-35,25;UBERON:0000015,2.19e-35,25;UBERON:0002423,2.19e-35,25;UBERON:0006235,2.19e-35,25;UBERON:0004161,2.19e-35,25;UBERON:0008835,9.06e-33,22;UBERON:0003894,9.06e-33,22;UBERON:0009854,2.70e-31,23;UBERON:0007499,1.07e-28,25;UBERON:0009856,1.51e-27,26;UBERON:0002365,6.51e-23,31;UBERON:0002330,6.51e-23,31;UBERON:0005172,1.48e-22,54;UBERON:0005173,1.48e-22,54;UBERON:0002368,3.73e-20,35;UBERON:0002417,4.13e-20,60;UBERON:0000916,4.13e-20,60;UBERON:0003929,7.37e-19,54;UBERON:0000949,2.12e-15,45;UBERON:0005911,7.89e-12,82;UBERON:0002530,1.91e-11,59;UBERON:0005177,3.71e-11,101;UBERON:0001764,3.61e-10,1;UBERON:0001825,3.61e-10,1;UBERON:0009569,7.22e-10,112;UBERON:0004921,4.22e-09,118;UBERON:0001007,2.04e-08,145;UBERON:0001555,2.04e-08,145;UBERON:0007026,2.04e-08,145;UBERON:0002108,5.41e-08,4;UBERON:0004119,1.98e-07,160;UBERON:0000925,1.98e-07,160;UBERON:0006595,1.98e-07,160;UBERON:0001041,2.39e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.7020744677662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,505.752588939105,73.712041250822,239.86070211265,0,1.59884970106048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,287.587463508793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,285.349860154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.78532922266653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.9623423108552,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,1.19807400299395,0.858452096273142,0,0,0,17.4743924291181,68.1474526957485,68.4875783147493,72.5936167309571,0,0,0,0,0,0,0,0,0,0,0,14.4214444357533,21.7686540760242,0,0,0,0,0,0,0,0,0,0,0,0,0,256.466408936644,238.512400041998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66991963625398,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84127428655144,2.82190377816914,0,0,0,0,0.8453114551668,0,0,0.773494655682926,0,0,0,0,0,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0.248298857183432,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@PAH | |||
}} |
Revision as of 20:29, 10 September 2013
Short description: | p2@PAH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PAH_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 22bp_to_ENST00000551988_5end |
EntrezGene: | PAH |
HGNC: | 8582 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.24e-37 | 12 |
endodermal cell | 3.98e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 3.61e-10 | 1 |
maxillary sinus cancer | 3.61e-10 | 1 |
vascular disease | 4.75e-10 | 1 |
ischemia | 4.75e-10 | 1 |
extrinsic cardiomyopathy | 4.75e-10 | 1 |
myocardial ischemia | 4.75e-10 | 1 |
myocardial infarction | 4.75e-10 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.