FFCP PHASE1:Hg19::chr12:51717949..51717976,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51411|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1053|TSSclassifier=S|UniProt=|association_with_transcript=-1bp_to_ENST00000452142_5end|coexpression_cluster_id=C246|description=CAGE_peak_4_at_BIN2_5end|id=chr12:51717949..51717976,-|ontology_enrichment_celltype=CL:0000037!1.93e-79!172;CL:0000566!1.93e-79!172;CL:0002032!2.69e-76!165;CL:0000837!2.69e-76!165;CL:0000988!1.67e-72!182;CL:0000738!2.33e-69!140;CL:0002031!1.19e-56!124;CL:0002087!5.91e-56!119;CL:0000763!1.47e-51!112;CL:0000049!1.47e-51!112;CL:0000766!3.75e-43!76;CL:0000557!6.11e-36!71;CL:0000839!2.90e-35!70;CL:0002194!3.91e-32!63;CL:0000576!3.91e-32!63;CL:0000040!3.91e-32!63;CL:0000559!3.91e-32!63;CL:0002009!1.97e-31!65;CL:0002057!6.58e-25!42;CL:0000860!4.72e-22!45;CL:0000542!2.26e-20!53;CL:0000051!2.26e-20!53;CL:0000838!2.89e-20!52;CL:0000084!1.16e-13!25;CL:0000827!1.16e-13!25;CL:0000134!6.60e-13!358;CL:0002320!8.44e-12!365;CL:0000791!3.80e-10!18;CL:0000789!3.80e-10!18;CL:0002420!3.80e-10!18;CL:0002419!3.80e-10!18;CL:0000790!3.80e-10!18;CL:0000094!2.03e-08!8;CL:0000219!3.93e-08!390;CL:0000625!2.44e-07!11;CL:0000945!6.48e-07!24;CL:0000826!6.48e-07!24|ontology_enrichment_celltype_v019=CL:0000473;4.09e-24;39!CL:0000234;4.09e-24;39!CL:0000576;1.34e-23;48!CL:0000766;3.22e-23;69!CL:0000860;1.65e-22;33!CL:0002057;1.65e-22;33!CL:0000763;3.63e-18;100!CL:0000738;5.91e-18;136!CL:0002087;3.78e-17;104!CL:0000084;1.62e-14;25!CL:0000988;6.28e-13;177!CL:0000542;2.29e-11;53!CL:0000791;3.12e-11;18!CL:0000789;3.12e-11;18!CL:0002419;3.12e-11;18!CL:0000094;4.13e-10;8!CL:0000625;9.13e-09;11!CL:0000219;4.02e-08;193!CL:0000235;1.20e-07;6|ontology_enrichment_celltype_v019_2=CL:0000037,4.39e-89,168;CL:0002032,3.31e-86,161;CL:0000837,3.31e-86,161;CL:0000738,8.37e-84,136;CL:0000988,4.17e-82,177;CL:0002087,4.97e-68,115;CL:0002031,5.54e-68,120;CL:0000763,8.03e-62,108;CL:0000049,8.03e-62,108;CL:0000766,3.14e-59,72;CL:0000557,1.25e-48,67;CL:0000839,6.98e-48,66;CL:0002194,4.91e-45,59;CL:0000576,4.91e-45,59;CL:0000040,4.91e-45,59;CL:0000559,4.91e-45,59;CL:0002009,7.56e-43,61;CL:0000473,7.31e-37,48;CL:0000234,7.31e-37,48;CL:0000860,9.86e-31,42;CL:0002057,9.86e-31,42;CL:0000134,2.98e-21,354;CL:0000838,9.95e-21,52;CL:0000542,4.53e-20,53;CL:0000051,4.53e-20,53;CL:0002320,5.02e-20,361;CL:0000219,8.62e-16,386;CL:0000084,1.43e-14,25;CL:0000827,1.43e-14,25;CL:0000791,2.95e-11,18;CL:0000789,2.95e-11,18;CL:0002420,2.95e-11,18;CL:0002419,2.95e-11,18;CL:0000790,2.95e-11,18;CL:0000048,3.29e-11,427;CL:0000723,1.51e-10,433;CL:0000094,3.99e-10,8;CL:0000034,4.82e-10,441;CL:0000625,8.85e-09,11;CL:0000235,1.30e-07,6;CL:0002393,1.95e-07,9;CL:0002397,1.95e-07,9|ontology_enrichment_development_v019=CL:0002057;2.37e-22;42!CL:0000049;7.65e-17;108!CL:0000051;2.29e-11;53!CL:0000790;3.12e-11;18|ontology_enrichment_disease=DOID:1240!7.50e-13!39;DOID:2531!3.23e-12!51;DOID:0060083!3.23e-12!51;DOID:8692!2.62e-10!31|ontology_enrichment_disease_v019=DOID:8692;2.04e-08;31!DOID:1240;6.95e-08;39|ontology_enrichment_disease_v019_2=DOID:1240,8.56e-11,39;DOID:2531,2.38e-09,51;DOID:0060083,2.38e-09,51;DOID:8692,4.81e-09,31|ontology_enrichment_uberon=UBERON:0002390!1.53e-42!102;UBERON:0003061!1.53e-42!102;UBERON:0002193!6.39e-38!112;UBERON:0002371!1.04e-30!80;UBERON:0001474!1.24e-26!86;UBERON:0002405!1.08e-22!115;UBERON:0004765!2.20e-19!101;UBERON:0001434!2.20e-19!101;UBERON:0007023!1.84e-15!115;UBERON:0002384!5.43e-11!375;UBERON:0000178!8.45e-09!15;UBERON:0000179!8.45e-09!15;UBERON:0000463!8.45e-09!15;UBERON:0003081!1.38e-08!216|ontology_enrichment_uberon_v019=UBERON:0000178;6.05e-10;15!UBERON:0000179;6.05e-10;15!UBERON:0000463;6.05e-10;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.64e-54,98;UBERON:0003061,1.64e-54,98;UBERON:0002193,1.50e-49,108;UBERON:0002371,2.80e-41,76;UBERON:0002405,5.07e-40,93;UBERON:0001474,1.64e-36,82;UBERON:0004765,3.46e-31,90;UBERON:0001434,8.57e-26,100;UBERON:0002384,6.48e-19,371;UBERON:0003081,1.75e-15,203;UBERON:0000178,6.11e-10,15;UBERON:0000179,6.11e-10,15;UBERON:0000463,6.11e-10,15;UBERON:0002204,2.66e-09,167|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,2.21598876669059,2.38091709404843,2.99100968991981,11.0141997517693,8.06041736004147,6.96672554922342,0,0,0,0,0.142169232487422,0.587200878669695,8.30993112797816,12.6343001906189,8.46342395791822,10.7479427635164,11.6601719766833,16.4848363285879,6.97911546141911,4.53451132426571,5.09426528494414,4.41615170120801,2.05583944010913,2.16794459626573,6.04154023876516,5.37937483711111,2.60130452877444,4.13694816883942,2.5819387343353,6.77132432971709,7.34145124216158,4.63940455098338,2.24723484445085,3.67300670845083,1.60464513538047,5.11469700639233,6.59702600373432,3.78980949481101,2.98357325372886,3.19230162491442,3.97169657283798,2.4912889959823,6.28121663141858,4.17186334736161,5.42972111762792,3.02699751316684,5.15588690382591,1.26584954976354,4.01385043992689,1.91343869968539,3.98351426465914,9.2109477540126,8.7102597848073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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51411 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1053 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-1bp_to_ENST00000452142_5end | |||
|coexpression_cluster_id=C246 | |||
|description=CAGE_peak_4_at_BIN2_5end | |||
|id=chr12:51717949..51717976,- | |||
|ontology_enrichment_celltype=CL:0000037!1.93e-79!172;CL:0000566!1.93e-79!172;CL:0002032!2.69e-76!165;CL:0000837!2.69e-76!165;CL:0000988!1.67e-72!182;CL:0000738!2.33e-69!140;CL:0002031!1.19e-56!124;CL:0002087!5.91e-56!119;CL:0000763!1.47e-51!112;CL:0000049!1.47e-51!112;CL:0000766!3.75e-43!76;CL:0000557!6.11e-36!71;CL:0000839!2.90e-35!70;CL:0002194!3.91e-32!63;CL:0000576!3.91e-32!63;CL:0000040!3.91e-32!63;CL:0000559!3.91e-32!63;CL:0002009!1.97e-31!65;CL:0002057!6.58e-25!42;CL:0000860!4.72e-22!45;CL:0000542!2.26e-20!53;CL:0000051!2.26e-20!53;CL:0000838!2.89e-20!52;CL:0000084!1.16e-13!25;CL:0000827!1.16e-13!25;CL:0000134!6.60e-13!358;CL:0002320!8.44e-12!365;CL:0000791!3.80e-10!18;CL:0000789!3.80e-10!18;CL:0002420!3.80e-10!18;CL:0002419!3.80e-10!18;CL:0000790!3.80e-10!18;CL:0000094!2.03e-08!8;CL:0000219!3.93e-08!390;CL:0000625!2.44e-07!11;CL:0000945!6.48e-07!24;CL:0000826!6.48e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.09e-24;39!CL:0000234;4.09e-24;39!CL:0000576;1.34e-23;48!CL:0000766;3.22e-23;69!CL:0000860;1.65e-22;33!CL:0002057;1.65e-22;33!CL:0000763;3.63e-18;100!CL:0000738;5.91e-18;136!CL:0002087;3.78e-17;104!CL:0000084;1.62e-14;25!CL:0000988;6.28e-13;177!CL:0000542;2.29e-11;53!CL:0000791;3.12e-11;18!CL:0000789;3.12e-11;18!CL:0002419;3.12e-11;18!CL:0000094;4.13e-10;8!CL:0000625;9.13e-09;11!CL:0000219;4.02e-08;193!CL:0000235;1.20e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.39e-89,168;CL:0002032,3.31e-86,161;CL:0000837,3.31e-86,161;CL:0000738,8.37e-84,136;CL:0000988,4.17e-82,177;CL:0002087,4.97e-68,115;CL:0002031,5.54e-68,120;CL:0000763,8.03e-62,108;CL:0000049,8.03e-62,108;CL:0000766,3.14e-59,72;CL:0000557,1.25e-48,67;CL:0000839,6.98e-48,66;CL:0002194,4.91e-45,59;CL:0000576,4.91e-45,59;CL:0000040,4.91e-45,59;CL:0000559,4.91e-45,59;CL:0002009,7.56e-43,61;CL:0000473,7.31e-37,48;CL:0000234,7.31e-37,48;CL:0000860,9.86e-31,42;CL:0002057,9.86e-31,42;CL:0000134,2.98e-21,354;CL:0000838,9.95e-21,52;CL:0000542,4.53e-20,53;CL:0000051,4.53e-20,53;CL:0002320,5.02e-20,361;CL:0000219,8.62e-16,386;CL:0000084,1.43e-14,25;CL:0000827,1.43e-14,25;CL:0000791,2.95e-11,18;CL:0000789,2.95e-11,18;CL:0002420,2.95e-11,18;CL:0002419,2.95e-11,18;CL:0000790,2.95e-11,18;CL:0000048,3.29e-11,427;CL:0000723,1.51e-10,433;CL:0000094,3.99e-10,8;CL:0000034,4.82e-10,441;CL:0000625,8.85e-09,11;CL:0000235,1.30e-07,6;CL:0002393,1.95e-07,9;CL:0002397,1.95e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.37e-22;42!CL:0000049;7.65e-17;108!CL:0000051;2.29e-11;53!CL:0000790;3.12e-11;18 | |||
|ontology_enrichment_disease=DOID:1240!7.50e-13!39;DOID:2531!3.23e-12!51;DOID:0060083!3.23e-12!51;DOID:8692!2.62e-10!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.04e-08;31!DOID:1240;6.95e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,8.56e-11,39;DOID:2531,2.38e-09,51;DOID:0060083,2.38e-09,51;DOID:8692,4.81e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.53e-42!102;UBERON:0003061!1.53e-42!102;UBERON:0002193!6.39e-38!112;UBERON:0002371!1.04e-30!80;UBERON:0001474!1.24e-26!86;UBERON:0002405!1.08e-22!115;UBERON:0004765!2.20e-19!101;UBERON:0001434!2.20e-19!101;UBERON:0007023!1.84e-15!115;UBERON:0002384!5.43e-11!375;UBERON:0000178!8.45e-09!15;UBERON:0000179!8.45e-09!15;UBERON:0000463!8.45e-09!15;UBERON:0003081!1.38e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.05e-10;15!UBERON:0000179;6.05e-10;15!UBERON:0000463;6.05e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.64e-54,98;UBERON:0003061,1.64e-54,98;UBERON:0002193,1.50e-49,108;UBERON:0002371,2.80e-41,76;UBERON:0002405,5.07e-40,93;UBERON:0001474,1.64e-36,82;UBERON:0004765,3.46e-31,90;UBERON:0001434,8.57e-26,100;UBERON:0002384,6.48e-19,371;UBERON:0003081,1.75e-15,203;UBERON:0000178,6.11e-10,15;UBERON:0000179,6.11e-10,15;UBERON:0000463,6.11e-10,15;UBERON:0002204,2.66e-09,167 | |||
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| |||
|short_description=p4@BIN2 | |||
}} |
Revision as of 23:03, 10 September 2013
Short description: | p4@BIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_BIN2_5end |
Coexpression cluster: | C246_Neutrophils_Eosinophils_Whole_CD14_CD14CD16_Basophils_migratory |
Association with transcript: | -1bp_to_ENST00000452142_5end |
EntrezGene: | BIN2 |
HGNC: | 1053 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.64e-54 | 98 |
blood island | 1.64e-54 | 98 |
hemolymphoid system | 1.50e-49 | 108 |
bone marrow | 2.80e-41 | 76 |
immune system | 5.07e-40 | 93 |
bone element | 1.64e-36 | 82 |
skeletal element | 3.46e-31 | 90 |
skeletal system | 8.57e-26 | 100 |
connective tissue | 6.48e-19 | 371 |
lateral plate mesoderm | 1.75e-15 | 203 |
blood | 6.11e-10 | 15 |
haemolymphatic fluid | 6.11e-10 | 15 |
organism substance | 6.11e-10 | 15 |
musculoskeletal system | 2.66e-09 | 167 |
Ontology term | p-value | n |
---|---|---|
leukemia | 8.56e-11 | 39 |
hematologic cancer | 2.38e-09 | 51 |
immune system cancer | 2.38e-09 | 51 |
myeloid leukemia | 4.81e-09 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.