FFCP PHASE1:Hg19::chr12:92951054..92951066,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C0|description=CAGE_peak_at_chr12:92951054..92951066,+|id=chr12:92951054..92951066,+|ontology_enrichment_celltype=CL:0002057!3.67e-44!42;CL:0000860!5.74e-41!45;CL:0002087!5.87e-35!119;CL:0002194!5.69e-31!63;CL:0000576!5.69e-31!63;CL:0000040!5.69e-31!63;CL:0000559!5.69e-31!63;CL:0002031!8.37e-31!124;CL:0002009!6.52e-30!65;CL:0000738!5.77e-29!140;CL:0000839!1.59e-27!70;CL:0000557!4.36e-27!71;CL:0000766!4.54e-25!76;CL:0002032!8.41e-24!165;CL:0000837!8.41e-24!165;CL:0000037!1.27e-22!172;CL:0000566!1.27e-22!172;CL:0000988!4.29e-21!182;CL:0000763!8.22e-16!112;CL:0000049!8.22e-16!112;CL:0000945!1.15e-11!24;CL:0000826!1.15e-11!24;CL:0000134!4.49e-08!358;CL:0002320!8.18e-08!365;CL:0000542!8.23e-08!53;CL:0000051!8.23e-08!53;CL:0000946!2.07e-07!1;CL:0000786!2.07e-07!1;CL:0000980!2.07e-07!1;CL:0000219!6.78e-07!390|ontology_enrichment_celltype_v019=CL:0000860;5.44e-40;33!CL:0002057;5.44e-40;33!CL:0000473;4.67e-29;39!CL:0000234;4.67e-29;39!CL:0000576;2.24e-16;48!CL:0002087;8.71e-16;104!CL:0000766;4.57e-13;69!CL:0000945;1.00e-12;24!CL:0000738;1.12e-07;136|ontology_enrichment_celltype_v019_2=CL:0000860,1.04e-34,42;CL:0002057,1.04e-34,42;CL:0000473,3.20e-30,48;CL:0000234,3.20e-30,48;CL:0002087,1.09e-25,115;CL:0002031,1.46e-24,120;CL:0002194,6.26e-24,59;CL:0000576,6.26e-24,59;CL:0000040,6.26e-24,59;CL:0000559,6.26e-24,59;CL:0002009,4.07e-23,61;CL:0000738,1.69e-21,136;CL:0000839,2.69e-21,66;CL:0000557,5.77e-21,67;CL:0000766,1.93e-19,72;CL:0002032,6.43e-18,161;CL:0000837,6.43e-18,161;CL:0000037,4.19e-17,168;CL:0000988,3.76e-16,177;CL:0000945,1.07e-12,24;CL:0000826,1.07e-12,24;CL:0000763,1.42e-12,108;CL:0000049,1.42e-12,108;CL:0000134,3.77e-07,354;CL:0002320,5.67e-07,361|ontology_enrichment_development_v019=CL:0002057;5.43e-22;42|ontology_enrichment_disease=DOID:630!1.42e-07!1;DOID:0050177!1.42e-07!1;DOID:0050427!1.42e-07!1;DOID:12603!3.84e-07!1|ontology_enrichment_disease_v019=DOID:630;1.51e-13;1!DOID:0050177;1.51e-13;1!DOID:0050427;1.51e-13;1|ontology_enrichment_disease_v019_2=DOID:630,1.42e-13,1;DOID:0050177,1.42e-13,1;DOID:0050427,1.42e-13,1|ontology_enrichment_uberon=UBERON:0002371!1.24e-23!80;UBERON:0001474!9.95e-22!86;UBERON:0004765!6.03e-18!101;UBERON:0001434!6.03e-18!101;UBERON:0002390!9.84e-18!102;UBERON:0003061!9.84e-18!102;UBERON:0002193!1.12e-17!112;UBERON:0002405!4.10e-17!115;UBERON:0002204!2.41e-09!167;UBERON:0002384!2.79e-08!375;UBERON:0001154!2.35e-07!1;UBERON:0001153!2.35e-07!1;UBERON:0002372!4.34e-07!1;UBERON:0001961!4.34e-07!1;UBERON:0001744!4.34e-07!1;UBERON:0001735!4.34e-07!1|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.31e-18,76;UBERON:0001474,6.12e-17,82;UBERON:0004765,2.47e-15,90;UBERON:0002405,8.43e-15,93;UBERON:0002390,5.52e-14,98;UBERON:0003061,5.52e-14,98;UBERON:0001434,1.11e-13,100;UBERON:0002193,1.42e-12,108;UBERON:0002204,1.18e-07,167;UBERON:0002384,9.92e-07,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83392173795083,2.29881650459848,1.02324015707783,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0.464858073811369,0.822335776043652,1.54853185447552,0.863077176966451,0,0.236482229888585,3.44745680736619,2.5819387343353,0,0.188242339542605,0,0,2.44867113896722,1.92557416245656,2.55734850319616,0,0,0,7.2552309657146,3.40431134814684,5.60540024096017,0.502497330513487,0,0,0.605399502633369,7.36555271975129,9.17740923578565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,1.6001024709939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr12:92951054..92951066,+ | |||
|id=chr12:92951054..92951066,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.67e-44!42;CL:0000860!5.74e-41!45;CL:0002087!5.87e-35!119;CL:0002194!5.69e-31!63;CL:0000576!5.69e-31!63;CL:0000040!5.69e-31!63;CL:0000559!5.69e-31!63;CL:0002031!8.37e-31!124;CL:0002009!6.52e-30!65;CL:0000738!5.77e-29!140;CL:0000839!1.59e-27!70;CL:0000557!4.36e-27!71;CL:0000766!4.54e-25!76;CL:0002032!8.41e-24!165;CL:0000837!8.41e-24!165;CL:0000037!1.27e-22!172;CL:0000566!1.27e-22!172;CL:0000988!4.29e-21!182;CL:0000763!8.22e-16!112;CL:0000049!8.22e-16!112;CL:0000945!1.15e-11!24;CL:0000826!1.15e-11!24;CL:0000134!4.49e-08!358;CL:0002320!8.18e-08!365;CL:0000542!8.23e-08!53;CL:0000051!8.23e-08!53;CL:0000946!2.07e-07!1;CL:0000786!2.07e-07!1;CL:0000980!2.07e-07!1;CL:0000219!6.78e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.44e-40;33!CL:0002057;5.44e-40;33!CL:0000473;4.67e-29;39!CL:0000234;4.67e-29;39!CL:0000576;2.24e-16;48!CL:0002087;8.71e-16;104!CL:0000766;4.57e-13;69!CL:0000945;1.00e-12;24!CL:0000738;1.12e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.04e-34,42;CL:0002057,1.04e-34,42;CL:0000473,3.20e-30,48;CL:0000234,3.20e-30,48;CL:0002087,1.09e-25,115;CL:0002031,1.46e-24,120;CL:0002194,6.26e-24,59;CL:0000576,6.26e-24,59;CL:0000040,6.26e-24,59;CL:0000559,6.26e-24,59;CL:0002009,4.07e-23,61;CL:0000738,1.69e-21,136;CL:0000839,2.69e-21,66;CL:0000557,5.77e-21,67;CL:0000766,1.93e-19,72;CL:0002032,6.43e-18,161;CL:0000837,6.43e-18,161;CL:0000037,4.19e-17,168;CL:0000988,3.76e-16,177;CL:0000945,1.07e-12,24;CL:0000826,1.07e-12,24;CL:0000763,1.42e-12,108;CL:0000049,1.42e-12,108;CL:0000134,3.77e-07,354;CL:0002320,5.67e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;5.43e-22;42 | |||
|ontology_enrichment_disease=DOID:630!1.42e-07!1;DOID:0050177!1.42e-07!1;DOID:0050427!1.42e-07!1;DOID:12603!3.84e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:630;1.51e-13;1!DOID:0050177;1.51e-13;1!DOID:0050427;1.51e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.42e-13,1;DOID:0050177,1.42e-13,1;DOID:0050427,1.42e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.24e-23!80;UBERON:0001474!9.95e-22!86;UBERON:0004765!6.03e-18!101;UBERON:0001434!6.03e-18!101;UBERON:0002390!9.84e-18!102;UBERON:0003061!9.84e-18!102;UBERON:0002193!1.12e-17!112;UBERON:0002405!4.10e-17!115;UBERON:0002204!2.41e-09!167;UBERON:0002384!2.79e-08!375;UBERON:0001154!2.35e-07!1;UBERON:0001153!2.35e-07!1;UBERON:0002372!4.34e-07!1;UBERON:0001961!4.34e-07!1;UBERON:0001744!4.34e-07!1;UBERON:0001735!4.34e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.31e-18,76;UBERON:0001474,6.12e-17,82;UBERON:0004765,2.47e-15,90;UBERON:0002405,8.43e-15,93;UBERON:0002390,5.52e-14,98;UBERON:0003061,5.52e-14,98;UBERON:0001434,1.11e-13,100;UBERON:0002193,1.42e-12,108;UBERON:0002204,1.18e-07,167;UBERON:0002384,9.92e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83392173795083,2.29881650459848,1.02324015707783,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0.464858073811369,0.822335776043652,1.54853185447552,0.863077176966451,0,0.236482229888585,3.44745680736619,2.5819387343353,0,0.188242339542605,0,0,2.44867113896722,1.92557416245656,2.55734850319616,0,0,0,7.2552309657146,3.40431134814684,5.60540024096017,0.502497330513487,0,0,0.605399502633369,7.36555271975129,9.17740923578565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,1.6001024709939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.806637912890455,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,1.60284246151616 | |||
|short_description=p@chr12:92951054..92951066,+ | |||
}} |
Revision as of 00:59, 11 September 2013
Short description: | p@chr12:92951054..92951066, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:92951054..92951066, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.04e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.04e-34 | 42 |
defensive cell | 3.20e-30 | 48 |
phagocyte | 3.20e-30 | 48 |
nongranular leukocyte | 1.09e-25 | 115 |
hematopoietic lineage restricted progenitor cell | 1.46e-24 | 120 |
monopoietic cell | 6.26e-24 | 59 |
monocyte | 6.26e-24 | 59 |
monoblast | 6.26e-24 | 59 |
promonocyte | 6.26e-24 | 59 |
macrophage dendritic cell progenitor | 4.07e-23 | 61 |
leukocyte | 1.69e-21 | 136 |
myeloid lineage restricted progenitor cell | 2.69e-21 | 66 |
granulocyte monocyte progenitor cell | 5.77e-21 | 67 |
myeloid leukocyte | 1.93e-19 | 72 |
hematopoietic oligopotent progenitor cell | 6.43e-18 | 161 |
hematopoietic multipotent progenitor cell | 6.43e-18 | 161 |
hematopoietic stem cell | 4.19e-17 | 168 |
hematopoietic cell | 3.76e-16 | 177 |
lymphocyte of B lineage | 1.07e-12 | 24 |
pro-B cell | 1.07e-12 | 24 |
myeloid cell | 1.42e-12 | 108 |
common myeloid progenitor | 1.42e-12 | 108 |
mesenchymal cell | 3.77e-07 | 354 |
connective tissue cell | 5.67e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.31e-18 | 76 |
bone element | 6.12e-17 | 82 |
skeletal element | 2.47e-15 | 90 |
immune system | 8.43e-15 | 93 |
hematopoietic system | 5.52e-14 | 98 |
blood island | 5.52e-14 | 98 |
skeletal system | 1.11e-13 | 100 |
hemolymphoid system | 1.42e-12 | 108 |
musculoskeletal system | 1.18e-07 | 167 |
connective tissue | 9.92e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.42e-13 | 1 |
monogenic disease | 1.42e-13 | 1 |
xeroderma pigmentosum | 1.42e-13 | 1 |
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